RNA–Protein interactions for RNA: ENST00000462321.1

PTPN18-207, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 2

Gene PTPN18, Length 1,717 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-207ENST00000462321 FAM47AQ5JRC9 791 aa23.36■■□□□ 1.33
PTPN18-207ENST00000462321 CCDC83Q8IWF9 413 aa23.36■■□□□ 1.33
PTPN18-207ENST00000462321 TSPY3P0CV98 308 aa23.35■■□□□ 1.33
PTPN18-207ENST00000462321 TSPY8P0CW00 308 aa23.35■■□□□ 1.33
PTPN18-207ENST00000462321 PDIA3P30101 505 aaKnown RBP23.35■■□□□ 1.33
PTPN18-207ENST00000462321 NECAB1Q8N987 351 aa23.35■■□□□ 1.33
PTPN18-207ENST00000462321 CWC22Q9HCG8 908 aaKnown RBP23.35■■□□□ 1.33
PTPN18-207ENST00000462321 BRPF3Q9ULD4 1205 aa23.35■■□□□ 1.33
PTPN18-207ENST00000462321 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.35■■□□□ 1.33
PTPN18-207ENST00000462321 DDIT3P35638 169 aa23.34■■□□□ 1.33
PTPN18-207ENST00000462321 STK3Q13188 491 aa23.34■■□□□ 1.33
PTPN18-207ENST00000462321 TNFAIP1Q13829 316 aa23.34■■□□□ 1.33
PTPN18-207ENST00000462321 CCDC178Q5BJE1 867 aa23.34■■□□□ 1.33
PTPN18-207ENST00000462321 NFXL1Q6ZNB6 911 aa23.34■■□□□ 1.33
PTPN18-207ENST00000462321 METTL16Q86W50 562 aaKnown RBP23.34■■□□□ 1.33
PTPN18-207ENST00000462321 FOXP4Q8IVH2 680 aaPredicted RBP23.34■■□□□ 1.33
PTPN18-207ENST00000462321 CRACR2BQ8N4Y2 399 aaPredicted RBP23.34■■□□□ 1.33
PTPN18-207ENST00000462321 ENAHQ8N8S7 591 aaPredicted RBP23.34■■□□□ 1.33
PTPN18-207ENST00000462321 SENP2Q9HC62 589 aa23.34■■□□□ 1.33
PTPN18-207ENST00000462321 TCP11L1Q9NUJ3 509 aa23.34■■□□□ 1.33
PTPN18-207ENST00000462321 GOLGA8BA8MQT2 603 aa23.33■■□□□ 1.33
PTPN18-207ENST00000462321 TNNI2P48788 182 aa23.33■■□□□ 1.33
PTPN18-207ENST00000462321 CSRNP1Q96S65 589 aa23.33■■□□□ 1.33
PTPN18-207ENST00000462321 PLIN4Q96Q06 1357 aa23.33■■□□□ 1.33
PTPN18-207ENST00000462321 CCDC69A6NI79 296 aa23.33■■□□□ 1.32
PTPN18-207ENST00000462321 LMOD1P29536 600 aaPredicted RBP23.33■■□□□ 1.32
PTPN18-207ENST00000462321 SHMT1P34896 483 aa23.33■■□□□ 1.32
PTPN18-207ENST00000462321 DPY19L2Q6NUT2 758 aa23.33■■□□□ 1.32
PTPN18-207ENST00000462321 APOA5Q6Q788 366 aa23.33■■□□□ 1.32
PTPN18-207ENST00000462321 CHMP4CQ96CF2 233 aa23.33■■□□□ 1.32
PTPN18-207ENST00000462321 DNAJC18Q9H819 358 aa23.33■■□□□ 1.32
PTPN18-207ENST00000462321 NAP1L2Q9ULW6 460 aaPredicted RBP23.33■■□□□ 1.32
PTPN18-207ENST00000462321 SIPA1L1O43166 1804 aa23.32■■□□□ 1.32
PTPN18-207ENST00000462321 EPS15P42566 896 aa23.32■■□□□ 1.32
PTPN18-207ENST00000462321 SCRN1Q12765 414 aa23.32■■□□□ 1.32
PTPN18-207ENST00000462321 NEDD1Q8NHV4 660 aa23.32■■□□□ 1.32
PTPN18-207ENST00000462321 TRPM4Q8TD43 1214 aa23.32■■□□□ 1.32
PTPN18-207ENST00000462321 TRIM34Q9BYJ4 488 aa23.32■■□□□ 1.32
PTPN18-207ENST00000462321 IFIT1BQ5T764 474 aaKnown RBP23.31■■□□□ 1.32
PTPN18-207ENST00000462321 HERC5Q9UII4 1024 aaKnown RBP23.31■■□□□ 1.32
PTPN18-207ENST00000462321 HPS5Q9UPZ3 1129 aa23.31■■□□□ 1.32
PTPN18-207ENST00000462321 SLC12A7Q9Y666 1083 aa23.31■■□□□ 1.32
PTPN18-207ENST00000462321 NMT2O60551 498 aa23.3■■□□□ 1.32
PTPN18-207ENST00000462321 RCAN1P53805 252 aa23.3■■□□□ 1.32
PTPN18-207ENST00000462321 DGKHQ86XP1 1220 aa23.3■■□□□ 1.32
PTPN18-207ENST00000462321 L3MBTL3Q96JM7 780 aaPredicted RBP23.3■■□□□ 1.32
PTPN18-207ENST00000462321 IL17RBQ9NRM6 502 aa23.3■■□□□ 1.32
PTPN18-207ENST00000462321 HACL1Q9UJ83 578 aa23.3■■□□□ 1.32
PTPN18-207ENST00000462321 CIZ1Q9ULV3 898 aaPredicted RBP23.3■■□□□ 1.32
PTPN18-207ENST00000462321 NID2Q14112 1375 aa23.3■■□□□ 1.32
PTPN18-207ENST00000462321 SYNE3Q6ZMZ3 975 aa23.3■■□□□ 1.32
PTPN18-207ENST00000462321 ANKS1AQ92625 1134 aa23.3■■□□□ 1.32
PTPN18-207ENST00000462321 CCDC17Q96LX7 622 aa23.3■■□□□ 1.32
PTPN18-207ENST00000462321 TMEM39BQ9GZU3 492 aa23.3■■□□□ 1.32
PTPN18-207ENST00000462321 ADARB2Q9NS39 739 aaKnown RBP23.3■■□□□ 1.32
PTPN18-207ENST00000462321 ZBTB43O43298 467 aa23.29■■□□□ 1.32
PTPN18-207ENST00000462321 TATDN1Q6P1N9 297 aa23.29■■□□□ 1.32
PTPN18-207ENST00000462321 LLPHQ9BRT6 129 aaKnown RBP23.29■■□□□ 1.32
PTPN18-207ENST00000462321 PGAP2Q9UHJ9 254 aa23.29■■□□□ 1.32
PTPN18-207ENST00000462321 SMC3Q9UQE7 1217 aa23.29■■□□□ 1.32
PTPN18-207ENST00000462321 ASTN2O75129 1339 aaPredicted RBP23.29■■□□□ 1.32
PTPN18-207ENST00000462321 METAP2P50579 478 aaKnown RBP eCLIP23.28■■□□□ 1.32
PTPN18-207ENST00000462321 CCT2P78371 535 aaKnown RBP23.28■■□□□ 1.32
PTPN18-207ENST00000462321 RASA3Q14644 834 aa23.28■■□□□ 1.32
PTPN18-207ENST00000462321 RCSD1Q6JBY9 416 aa23.28■■□□□ 1.32
PTPN18-207ENST00000462321 MICU3Q86XE3 530 aa23.28■■□□□ 1.32
PTPN18-207ENST00000462321 APOBEC3FQ8IUX4 373 aaKnown RBP23.28■■□□□ 1.32
PTPN18-207ENST00000462321 ZNF654Q8IZM8 581 aa23.28■■□□□ 1.32
PTPN18-207ENST00000462321 CHMP5Q9NZZ3 219 aa23.28■■□□□ 1.32
PTPN18-207ENST00000462321 DHX16O60231 1041 aaKnown RBP23.28■■□□□ 1.32
PTPN18-207ENST00000462321 AKR1B1P15121 316 aa23.28■■□□□ 1.32
PTPN18-207ENST00000462321 GLTPD2A6NH11 291 aa23.27■■□□□ 1.32
PTPN18-207ENST00000462321 FAM196BA6NMK8 535 aa23.27■■□□□ 1.32
PTPN18-207ENST00000462321 TBC1D12O60347 775 aa23.27■■□□□ 1.32
PTPN18-207ENST00000462321 HIRAP54198 1017 aaPredicted RBP23.27■■□□□ 1.32
PTPN18-207ENST00000462321 CATIPQ7Z7H3 387 aa23.27■■□□□ 1.32
PTPN18-207ENST00000462321 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.27■■□□□ 1.32
PTPN18-207ENST00000462321 NCOA5Q9HCD5 579 aaKnown RBP23.27■■□□□ 1.32
PTPN18-207ENST00000462321 GOLGA8AA7E2F4 631 aa23.26■■□□□ 1.31
PTPN18-207ENST00000462321 DDAH1O94760 285 aa23.26■■□□□ 1.31
PTPN18-207ENST00000462321 SLURP2P0DP57 97 aa23.26■■□□□ 1.31
PTPN18-207ENST00000462321 NOVP48745 357 aa23.26■■□□□ 1.31
PTPN18-207ENST00000462321 ANGEL2Q5VTE6 544 aaKnown RBP23.26■■□□□ 1.31
PTPN18-207ENST00000462321 RAB11FIP4Q86YS3 637 aa23.26■■□□□ 1.31
PTPN18-207ENST00000462321 MYL10Q9BUA6 226 aa23.26■■□□□ 1.31
PTPN18-207ENST00000462321 IGKV6D-41A0A0C4DH26 115 aa23.25■■□□□ 1.31
PTPN18-207ENST00000462321 CERKLQ49MI3 558 aaPredicted RBP23.25■■□□□ 1.31
PTPN18-207ENST00000462321 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.25■■□□□ 1.31
PTPN18-207ENST00000462321 GGA3Q9NZ52 723 aa23.25■■□□□ 1.31
PTPN18-207ENST00000462321 GJB2P29033 226 aa23.25■■□□□ 1.31
PTPN18-207ENST00000462321 CDAN1Q8IWY9 1227 aa23.25■■□□□ 1.31
PTPN18-207ENST00000462321 NSUN7Q8NE18 718 aaKnown RBP23.25■■□□□ 1.31
PTPN18-207ENST00000462321 SMARCC2Q8TAQ2 1214 aa23.25■■□□□ 1.31
PTPN18-207ENST00000462321 CEP95Q96GE4 821 aa23.25■■□□□ 1.31
PTPN18-207ENST00000462321 TEPSINQ96N21 525 aa23.25■■□□□ 1.31
PTPN18-207ENST00000462321 DEFB129Q9H1M3 183 aa23.25■■□□□ 1.31
PTPN18-207ENST00000462321 KAT14Q9H8E8 782 aa23.25■■□□□ 1.31
PTPN18-207ENST00000462321 STX8Q9UNK0 236 aa23.25■■□□□ 1.31
PTPN18-207ENST00000462321 PITPNM2Q9BZ72 1349 aa23.24■■□□□ 1.31
PTPN18-207ENST00000462321 CTDNEP1O95476 244 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms