RNA–Protein interactions for RNA: ENST00000462181.1

CALD1-213, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 188 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-213ENST00000462181 TMEM87BQ96K49 555 aa9.06□□□□□ -0.96
CALD1-213ENST00000462181 TGIF2Q9GZN2 237 aa9.06□□□□□ -0.96
CALD1-213ENST00000462181 LEFTY1O75610 366 aa9.05□□□□□ -0.96
CALD1-213ENST00000462181 HTR3BO95264 441 aa9.05□□□□□ -0.96
CALD1-213ENST00000462181 CST3P01034 146 aaPredicted RBP9.05□□□□□ -0.96
CALD1-213ENST00000462181 ERCC5P28715 1186 aaPredicted RBP9.05□□□□□ -0.96
CALD1-213ENST00000462181 GRIK1P39086 918 aa9.05□□□□□ -0.96
CALD1-213ENST00000462181 MLECQ14165 292 aa9.05□□□□□ -0.96
CALD1-213ENST00000462181 TMEM201Q5SNT2 666 aa9.05□□□□□ -0.96
CALD1-213ENST00000462181 PRAMEF13Q5VWM6 474 aa9.05□□□□□ -0.96
CALD1-213ENST00000462181 SLITRK4Q8IW52 837 aa9.05□□□□□ -0.96
CALD1-213ENST00000462181 XAGE3Q8WTP9 111 aa9.05□□□□□ -0.96
CALD1-213ENST00000462181 REV1Q9UBZ9 1251 aa9.05□□□□□ -0.96
CALD1-213ENST00000462181 PCDHB14Q9Y5E9 798 aa9.05□□□□□ -0.96
CALD1-213ENST00000462181 CYP26A1O43174 497 aa9.04□□□□□ -0.96
CALD1-213ENST00000462181 ZNF165P49910 485 aa9.04□□□□□ -0.96
CALD1-213ENST00000462181 PAK2Q13177 524 aa9.04□□□□□ -0.96
CALD1-213ENST00000462181 FAM13CQ8NE31 585 aa9.04□□□□□ -0.96
CALD1-213ENST00000462181 CCSER2Q9H7U1 834 aa9.04□□□□□ -0.96
CALD1-213ENST00000462181 LRRC4CQ9HCJ2 640 aa9.04□□□□□ -0.96
CALD1-213ENST00000462181 COBLO75128 1261 aa9.03□□□□□ -0.96
CALD1-213ENST00000462181 YARSP54577 528 aaKnown RBP9.03□□□□□ -0.96
CALD1-213ENST00000462181 RAD51AP2Q09MP3 1159 aa9.03□□□□□ -0.96
CALD1-213ENST00000462181 GK5Q6ZS86 529 aa9.03□□□□□ -0.96
CALD1-213ENST00000462181 REXO1Q8N1G1 1221 aaKnown RBP9.03□□□□□ -0.96
CALD1-213ENST00000462181 MIPEPQ99797 713 aa9.03□□□□□ -0.96
CALD1-213ENST00000462181 DPH2Q9BQC3 489 aaPredicted RBP9.03□□□□□ -0.96
CALD1-213ENST00000462181 UPK3BL1B0FP48 263 aa9.02□□□□□ -0.97
CALD1-213ENST00000462181 UPK3BL2E5RIL1 263 aa9.02□□□□□ -0.97
CALD1-213ENST00000462181 ATE1O95260 518 aa9.02□□□□□ -0.97
CALD1-213ENST00000462181 FOSL1P15407 271 aa9.02□□□□□ -0.97
CALD1-213ENST00000462181 INTS5Q6P9B9 1019 aaKnown RBP9.02□□□□□ -0.97
CALD1-213ENST00000462181 ACBD3Q9H3P7 528 aa9.02□□□□□ -0.97
CALD1-213ENST00000462181 KLHL3Q9UH77 587 aa9.02□□□□□ -0.97
CALD1-213ENST00000462181 SLITRK5O94991 958 aa9.01□□□□□ -0.97
CALD1-213ENST00000462181 SSTR4P31391 388 aa9.01□□□□□ -0.97
CALD1-213ENST00000462181 CLCQ05315 142 aa9.01□□□□□ -0.97
CALD1-213ENST00000462181 LETMD1Q6P1Q0 360 aa9.01□□□□□ -0.97
CALD1-213ENST00000462181 ARHGAP27Q6ZUM4 889 aa9.01□□□□□ -0.97
CALD1-213ENST00000462181 SPATA32Q96LK8 384 aa9.01□□□□□ -0.97
CALD1-213ENST00000462181 EHMT1Q9H9B1 1298 aa9.01□□□□□ -0.97
CALD1-213ENST00000462181 GTF2IRD1Q9UHL9 959 aa9.01□□□□□ -0.97
CALD1-213ENST00000462181 TPX2Q9ULW0 747 aaKnown RBP9.01□□□□□ -0.97
CALD1-213ENST00000462181 INPP5FQ9Y2H2 1132 aa9.01□□□□□ -0.97
CALD1-213ENST00000462181 CHURC1-FNTBB4DL54 471 aa9□□□□□ -0.97
CALD1-213ENST00000462181 EOMESO95936 686 aa9□□□□□ -0.97
CALD1-213ENST00000462181 GPRASP2Q96D09 838 aa9□□□□□ -0.97
CALD1-213ENST00000462181 SCO2A0A1W2PP80 73 aa8.99□□□□□ -0.97
CALD1-213ENST00000462181 HOXA10P31260 410 aaPredicted RBP8.99□□□□□ -0.97
CALD1-213ENST00000462181 SLFN12Q8IYM2 578 aa8.99□□□□□ -0.97
CALD1-213ENST00000462181 RIN3Q8TB24 985 aa8.99□□□□□ -0.97
CALD1-213ENST00000462181 PRDM5Q9NQX1 630 aaPredicted RBP8.99□□□□□ -0.97
CALD1-213ENST00000462181 SLC22A31A6NKX4 558 aa8.98□□□□□ -0.97
CALD1-213ENST00000462181 COL9A2Q14055 689 aaPredicted RBP8.98□□□□□ -0.97
CALD1-213ENST00000462181 LRRFIP1Q32MZ4 808 aaKnown RBP8.98□□□□□ -0.97
CALD1-213ENST00000462181 ZNF746Q6NUN9 644 aaPredicted RBP8.98□□□□□ -0.97
CALD1-213ENST00000462181 CDH24Q86UP0 819 aa8.98□□□□□ -0.97
CALD1-213ENST00000462181 PHACTR4Q8IZ21 702 aa8.98□□□□□ -0.97
CALD1-213ENST00000462181 FERD3LQ96RJ6 166 aa8.98□□□□□ -0.97
CALD1-213ENST00000462181 GMIPQ9P107 970 aa8.98□□□□□ -0.97
CALD1-213ENST00000462181 IGF2BP3O00425 579 aaKnown RBP eCLIP8.97□□□□□ -0.97
CALD1-213ENST00000462181 CYP7A1P22680 504 aa8.97□□□□□ -0.97
CALD1-213ENST00000462181 GJA8P48165 433 aa8.97□□□□□ -0.97
CALD1-213ENST00000462181 TNNI2P48788 182 aa8.97□□□□□ -0.97
CALD1-213ENST00000462181 FBXW10Q5XX13 1052 aa8.97□□□□□ -0.97
CALD1-213ENST00000462181 FAM214BQ7L5A3 538 aa8.97□□□□□ -0.97
CALD1-213ENST00000462181 FAM181AQ8N9Y4 354 aa8.97□□□□□ -0.97
CALD1-213ENST00000462181 RASGRP4Q8TDF6 673 aa8.97□□□□□ -0.97
CALD1-213ENST00000462181 CYB5D2Q8WUJ1 264 aa8.97□□□□□ -0.97
CALD1-213ENST00000462181 CCDC74BQ96LY2 380 aa8.97□□□□□ -0.97
CALD1-213ENST00000462181 HEXIM2Q96MH2 286 aaKnown RBP8.97□□□□□ -0.97
CALD1-213ENST00000462181 IGSF5Q9NSI5 407 aa8.97□□□□□ -0.97
CALD1-213ENST00000462181 GINM1Q9NU53 330 aa8.97□□□□□ -0.97
CALD1-213ENST00000462181 ZC3H7BQ9UGR2 993 aaKnown RBP8.97□□□□□ -0.97
CALD1-213ENST00000462181 CEP131Q9UPN4 1083 aa8.97□□□□□ -0.97
CALD1-213ENST00000462181 EFR3BQ9Y2G0 817 aa8.97□□□□□ -0.97
CALD1-213ENST00000462181 DNAJA2O60884 412 aa8.96□□□□□ -0.98
CALD1-213ENST00000462181 CD97P48960 835 aa8.96□□□□□ -0.98
CALD1-213ENST00000462181 ARSHQ5FYA8 562 aa8.96□□□□□ -0.98
CALD1-213ENST00000462181 MKNK2Q9HBH9 465 aa8.96□□□□□ -0.98
CALD1-213ENST00000462181 PCMTD2Q9NV79 361 aa8.96□□□□□ -0.98
CALD1-213ENST00000462181 MAPK8IP1Q9UQF2 711 aa8.96□□□□□ -0.98
CALD1-213ENST00000462181 GNAT3A8MTJ3 354 aa8.95□□□□□ -0.98
CALD1-213ENST00000462181 MED26O95402 600 aa8.95□□□□□ -0.98
CALD1-213ENST00000462181 IMPDH2P12268 514 aa8.95□□□□□ -0.98
CALD1-213ENST00000462181 RAG1P15918 1043 aa8.95□□□□□ -0.98
CALD1-213ENST00000462181 GBP1P32455 592 aa8.95□□□□□ -0.98
CALD1-213ENST00000462181 ETV3P41162 512 aa8.95□□□□□ -0.98
CALD1-213ENST00000462181 OXCT1P55809 520 aa8.95□□□□□ -0.98
CALD1-213ENST00000462181 GNL2Q13823 731 aaKnown RBP8.95□□□□□ -0.98
CALD1-213ENST00000462181 LRP8Q14114 963 aa8.95□□□□□ -0.98
CALD1-213ENST00000462181 SFRP5Q5T4F7 317 aa8.95□□□□□ -0.98
CALD1-213ENST00000462181 CAPN10Q9HC96 672 aa8.95□□□□□ -0.98
CALD1-213ENST00000462181 CHMP4BP1P59074 171 aa8.94□□□□□ -0.98
CALD1-213ENST00000462181 OVOS1Q6IE37 1185 aa8.94□□□□□ -0.98
CALD1-213ENST00000462181 VPS37DQ86XT2 251 aa8.94□□□□□ -0.98
CALD1-213ENST00000462181 NETO1Q8TDF5 533 aa8.94□□□□□ -0.98
CALD1-213ENST00000462181 KIF2CQ99661 725 aa8.94□□□□□ -0.98
CALD1-213ENST00000462181 ANTXR1Q9H6X2 564 aa8.94□□□□□ -0.98
CALD1-213ENST00000462181 ZNRF3Q9ULT6 936 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms