RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 ATAD5Q96QE3 1844 aa10.72□□□□□ -0.69
LDB1-203ENST00000461873 MPHOSPH10O00566 681 aaKnown RBP10.71□□□□□ -0.69
LDB1-203ENST00000461873 GDF11O95390 407 aa10.71□□□□□ -0.69
LDB1-203ENST00000461873 MYH1P12882 1939 aa10.71□□□□□ -0.69
LDB1-203ENST00000461873 USP14P54578 494 aa10.71□□□□□ -0.69
LDB1-203ENST00000461873 BACE1P56817 501 aa10.71□□□□□ -0.69
LDB1-203ENST00000461873 MTMR2Q13614 643 aa10.71□□□□□ -0.69
LDB1-203ENST00000461873 RAB3GAP1Q15042 981 aa10.71□□□□□ -0.69
LDB1-203ENST00000461873 LRRFIP1Q32MZ4 808 aaKnown RBP10.71□□□□□ -0.69
LDB1-203ENST00000461873 CERKLQ49MI3 558 aaPredicted RBP10.71□□□□□ -0.69
LDB1-203ENST00000461873 GPAT2Q6NUI2 795 aa10.71□□□□□ -0.69
LDB1-203ENST00000461873 ADGRA1Q86SQ6 560 aa10.71□□□□□ -0.69
LDB1-203ENST00000461873 CCDC84Q86UT8 332 aaPredicted RBP10.71□□□□□ -0.69
LDB1-203ENST00000461873 SLAIN1Q8ND83 568 aa10.71□□□□□ -0.69
LDB1-203ENST00000461873 GTF3C2Q8WUA4 911 aaPredicted RBP10.71□□□□□ -0.69
LDB1-203ENST00000461873 ZNF333Q96JL9 665 aa10.71□□□□□ -0.69
LDB1-203ENST00000461873 ANTXR1Q9H6X2 564 aa10.71□□□□□ -0.69
LDB1-203ENST00000461873 PAG1Q9NWQ8 432 aa10.71□□□□□ -0.69
LDB1-203ENST00000461873 MCM9Q9NXL9 1143 aa10.71□□□□□ -0.69
LDB1-203ENST00000461873 MYO5AQ9Y4I1 1855 aaKnown RBP10.7□□□□□ -0.7
LDB1-203ENST00000461873 ZNF532Q9HCE3 1301 aa10.7□□□□□ -0.7
LDB1-203ENST00000461873 SLURP2P0DP57 97 aa10.7□□□□□ -0.7
LDB1-203ENST00000461873 FAM110CQ1W6H9 321 aa10.7□□□□□ -0.7
LDB1-203ENST00000461873 ABCB5Q2M3G0 1257 aa10.7□□□□□ -0.7
LDB1-203ENST00000461873 PRPF38BQ5VTL8 546 aaKnown RBP10.7□□□□□ -0.7
LDB1-203ENST00000461873 USP17L2Q6R6M4 530 aa10.7□□□□□ -0.7
LDB1-203ENST00000461873 GCC1Q96CN9 775 aa10.7□□□□□ -0.7
LDB1-203ENST00000461873 WDR18Q9BV38 432 aa10.7□□□□□ -0.7
LDB1-203ENST00000461873 RNF208Q9H0X6 261 aa10.7□□□□□ -0.7
LDB1-203ENST00000461873 ZBTB21Q9ULJ3 1066 aa10.7□□□□□ -0.7
LDB1-203ENST00000461873 POTEFA5A3E0 1075 aa10.69□□□□□ -0.7
LDB1-203ENST00000461873 ADCY3O60266 1144 aa10.69□□□□□ -0.7
LDB1-203ENST00000461873 GH2P01242 217 aa10.69□□□□□ -0.7
LDB1-203ENST00000461873 BCRP11274 1271 aa10.69□□□□□ -0.7
LDB1-203ENST00000461873 PDE6AP16499 860 aa10.69□□□□□ -0.7
LDB1-203ENST00000461873 EN2P19622 333 aaPredicted RBP10.69□□□□□ -0.7
LDB1-203ENST00000461873 PRKCZQ05513 592 aa10.69□□□□□ -0.7
LDB1-203ENST00000461873 MOGSQ13724 837 aa10.69□□□□□ -0.7
LDB1-203ENST00000461873 TREML2Q5T2D2 321 aa10.69□□□□□ -0.7
LDB1-203ENST00000461873 EHD4Q9H223 541 aa10.69□□□□□ -0.7
LDB1-203ENST00000461873 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.69□□□□□ -0.7
LDB1-203ENST00000461873 MGAMO43451 1857 aa10.68□□□□□ -0.7
LDB1-203ENST00000461873 FOCADQ5VW36 1801 aa10.68□□□□□ -0.7
LDB1-203ENST00000461873 GLRX3O76003 335 aaKnown RBP10.68□□□□□ -0.7
LDB1-203ENST00000461873 ATP5JP18859 108 aa10.68□□□□□ -0.7
LDB1-203ENST00000461873 FLT3LGP49771 235 aa10.68□□□□□ -0.7
LDB1-203ENST00000461873 CCNA1P78396 465 aa10.68□□□□□ -0.7
LDB1-203ENST00000461873 ZYXQ15942 572 aaKnown RBP10.68□□□□□ -0.7
LDB1-203ENST00000461873 SH3D19Q5HYK7 790 aa10.68□□□□□ -0.7
LDB1-203ENST00000461873 GPRC5AQ8NFJ5 357 aa10.68□□□□□ -0.7
LDB1-203ENST00000461873 ASCC2Q9H1I8 757 aaPredicted RBP10.68□□□□□ -0.7
LDB1-203ENST00000461873 SWAP70Q9UH65 585 aa10.68□□□□□ -0.7
LDB1-203ENST00000461873 PTPRFP10586 1907 aa10.68□□□□□ -0.7
LDB1-203ENST00000461873 CENPFP49454 3210 aa10.67□□□□□ -0.7
LDB1-203ENST00000461873 ERC2O15083 957 aa10.67□□□□□ -0.7
LDB1-203ENST00000461873 TFRCP02786 760 aaKnown RBP10.67□□□□□ -0.7
LDB1-203ENST00000461873 CAPN2P17655 700 aa10.67□□□□□ -0.7
LDB1-203ENST00000461873 WDR78Q5VTH9 848 aa10.67□□□□□ -0.7
LDB1-203ENST00000461873 PXYLP1Q8TE99 480 aa10.67□□□□□ -0.7
LDB1-203ENST00000461873 DPF3Q92784 378 aa10.67□□□□□ -0.7
LDB1-203ENST00000461873 HAUS7Q99871 368 aa10.67□□□□□ -0.7
LDB1-203ENST00000461873 PAGR1Q9BTK6 254 aa10.67□□□□□ -0.7
LDB1-203ENST00000461873 HTATIP2Q9BUP3 242 aa10.67□□□□□ -0.7
LDB1-203ENST00000461873 SH2D4AQ9H788 454 aa10.67□□□□□ -0.7
LDB1-203ENST00000461873 ARHGEF10LQ9HCE6 1279 aa10.67□□□□□ -0.7
LDB1-203ENST00000461873 ATP8A2Q9NTI2 1148 aa10.67□□□□□ -0.7
LDB1-203ENST00000461873 ECHDC1Q9NTX5 307 aa10.67□□□□□ -0.7
LDB1-203ENST00000461873 CDK5RAP2Q96SN8 1893 aa10.67□□□□□ -0.7
LDB1-203ENST00000461873 PHIPQ8WWQ0 1821 aa10.67□□□□□ -0.7
LDB1-203ENST00000461873 KIAA0100Q14667 2235 aaKnown RBP10.66□□□□□ -0.7
LDB1-203ENST00000461873 ADGRA2Q96PE1 1338 aa10.66□□□□□ -0.7
LDB1-203ENST00000461873 USP17L15C9J2P7 530 aa10.66□□□□□ -0.7
LDB1-203ENST00000461873 USP17L13C9JLJ4 530 aa10.66□□□□□ -0.7
LDB1-203ENST00000461873 USP17L11C9JVI0 530 aa10.66□□□□□ -0.7
LDB1-203ENST00000461873 USP17L18D6R9N7 530 aa10.66□□□□□ -0.7
LDB1-203ENST00000461873 USP17L22D6RA61 530 aa10.66□□□□□ -0.7
LDB1-203ENST00000461873 USP17L17D6RBQ6 530 aa10.66□□□□□ -0.7
LDB1-203ENST00000461873 USP17L19D6RCP7 530 aa10.66□□□□□ -0.7
LDB1-203ENST00000461873 USP17L20D6RJB6 530 aa10.66□□□□□ -0.7
LDB1-203ENST00000461873 SMARCA5O60264 1052 aaPredicted RBP10.66□□□□□ -0.7
LDB1-203ENST00000461873 MBD4O95243 580 aa10.66□□□□□ -0.7
LDB1-203ENST00000461873 CCL5P13501 91 aa10.66□□□□□ -0.7
LDB1-203ENST00000461873 MAPK4P31152 587 aa10.66□□□□□ -0.7
LDB1-203ENST00000461873 HOXA7P31268 230 aaPredicted RBP10.66□□□□□ -0.7
LDB1-203ENST00000461873 ADD2P35612 726 aa10.66□□□□□ -0.7
LDB1-203ENST00000461873 HERVK_113P62684 666 aa10.66□□□□□ -0.7
LDB1-203ENST00000461873 USP17L24Q0WX57 530 aa10.66□□□□□ -0.7
LDB1-203ENST00000461873 C20orf194Q5TEA3 1177 aa10.66□□□□□ -0.7
LDB1-203ENST00000461873 TATDN1Q6P1N9 297 aa10.66□□□□□ -0.7
LDB1-203ENST00000461873 METTL16Q86W50 562 aaKnown RBP10.66□□□□□ -0.7
LDB1-203ENST00000461873 SIRT2Q8IXJ6 389 aa10.66□□□□□ -0.7
LDB1-203ENST00000461873 SDR42E1Q8WUS8 393 aa10.66□□□□□ -0.7
LDB1-203ENST00000461873 NUDT12Q9BQG2 462 aa10.66□□□□□ -0.7
LDB1-203ENST00000461873 ARMT1Q9H993 441 aa10.66□□□□□ -0.7
LDB1-203ENST00000461873 SLC4A4Q9Y6R1 1079 aa10.66□□□□□ -0.7
LDB1-203ENST00000461873 IVNS1ABPQ9Y6Y0 642 aa10.66□□□□□ -0.7
LDB1-203ENST00000461873 PDE4DIPQ5VU43 2346 aa10.66□□□□□ -0.7
LDB1-203ENST00000461873 RAD21O60216 631 aa10.65□□□□□ -0.7
LDB1-203ENST00000461873 APPP05067 770 aa10.65□□□□□ -0.7
LDB1-203ENST00000461873 GJB1P08034 283 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms