RNA–Protein interactions for RNA: ENST00000461841.7

CDH23-208, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 2,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-208ENST00000461841 SCNN1DP51172 638 aa29.57■■■□□ 2.32
CDH23-208ENST00000461841 KIF23Q02241 960 aaPredicted RBP29.57■■■□□ 2.32
CDH23-208ENST00000461841 CEBPZQ03701 1054 aaKnown RBP29.57■■■□□ 2.32
CDH23-208ENST00000461841 STRIP1Q5VSL9 837 aa29.57■■■□□ 2.32
CDH23-208ENST00000461841 RCSD1Q6JBY9 416 aa29.57■■■□□ 2.32
CDH23-208ENST00000461841 TRIM22Q8IYM9 498 aa29.57■■■□□ 2.32
CDH23-208ENST00000461841 SLC44A5Q8NCS7 719 aa29.57■■■□□ 2.32
CDH23-208ENST00000461841 FTOQ9C0B1 505 aaKnown RBP eCLIP29.57■■■□□ 2.32
CDH23-208ENST00000461841 IL17RBQ9NRM6 502 aa29.57■■■□□ 2.32
CDH23-208ENST00000461841 C21orf2O43822 256 aa29.57■■■□□ 2.32
CDH23-208ENST00000461841 GUCY1A2P33402 732 aa29.57■■■□□ 2.32
CDH23-208ENST00000461841 RCOR1Q9UKL0 485 aa29.57■■■□□ 2.32
CDH23-208ENST00000461841 KIF28PB7ZC32 967 aa29.56■■■□□ 2.32
CDH23-208ENST00000461841 CALM1P0DP23 149 aa29.56■■■□□ 2.32
CDH23-208ENST00000461841 CALM2P0DP24 149 aa29.56■■■□□ 2.32
CDH23-208ENST00000461841 CALM3P0DP25 149 aa29.56■■■□□ 2.32
CDH23-208ENST00000461841 AOC3Q16853 763 aa29.56■■■□□ 2.32
CDH23-208ENST00000461841 HHIPL2Q6UWX4 724 aa29.56■■■□□ 2.32
CDH23-208ENST00000461841 BRAPQ7Z569 592 aa29.56■■■□□ 2.32
CDH23-208ENST00000461841 WASF1Q92558 559 aa29.56■■■□□ 2.32
CDH23-208ENST00000461841 ECM29Q5VYK3 1845 aa29.56■■■□□ 2.32
CDH23-208ENST00000461841 DDAH1O94760 285 aa29.55■■■□□ 2.32
CDH23-208ENST00000461841 KIAA2012Q0VF49 1180 aa29.55■■■□□ 2.32
CDH23-208ENST00000461841 LRSAM1Q6UWE0 723 aa29.55■■■□□ 2.32
CDH23-208ENST00000461841 PGBD1Q96JS3 809 aa29.55■■■□□ 2.32
CDH23-208ENST00000461841 DACT2Q5SW24 774 aa29.55■■■□□ 2.32
CDH23-208ENST00000461841 CCDC183Q5T5S1 534 aa29.55■■■□□ 2.32
CDH23-208ENST00000461841 C16orf86Q6ZW13 317 aa29.55■■■□□ 2.32
CDH23-208ENST00000461841 TTLL6Q8N841 843 aa29.55■■■□□ 2.32
CDH23-208ENST00000461841 TEKT1Q969V4 418 aa29.55■■■□□ 2.32
CDH23-208ENST00000461841 SCN9AQ15858 1988 aa29.55■■■□□ 2.32
CDH23-208ENST00000461841 GOLGA6L4A6NEF3 574 aa29.54■■■□□ 2.32
CDH23-208ENST00000461841 FKBP1AP62942 108 aaKnown RBP29.54■■■□□ 2.32
CDH23-208ENST00000461841 FOCADQ5VW36 1801 aa29.54■■■□□ 2.32
CDH23-208ENST00000461841 DGKHQ86XP1 1220 aa29.54■■■□□ 2.32
CDH23-208ENST00000461841 ZNF444Q8N0Y2 327 aaPredicted RBP29.54■■■□□ 2.32
CDH23-208ENST00000461841 ZNF287Q9HBT7 754 aa29.54■■■□□ 2.32
CDH23-208ENST00000461841 RASA1P20936 1047 aa29.54■■■□□ 2.32
CDH23-208ENST00000461841 KCNA3P22001 575 aa29.54■■■□□ 2.32
CDH23-208ENST00000461841 FUT2Q10981 343 aa29.54■■■□□ 2.32
CDH23-208ENST00000461841 RBM28Q9NW13 759 aaKnown RBP29.54■■■□□ 2.32
CDH23-208ENST00000461841 MYH1P12882 1939 aa29.53■■■□□ 2.32
CDH23-208ENST00000461841 WDHD1O75717 1129 aaPredicted RBP29.53■■■□□ 2.32
CDH23-208ENST00000461841 DEXIO95424 95 aa29.53■■■□□ 2.32
CDH23-208ENST00000461841 CDK8P49336 464 aa29.53■■■□□ 2.32
CDH23-208ENST00000461841 TRIM29Q14134 588 aa29.53■■■□□ 2.32
CDH23-208ENST00000461841 APOBEC3HQ6NTF7 200 aaKnown RBP29.53■■■□□ 2.32
CDH23-208ENST00000461841 TAOK2Q9UL54 1235 aa29.53■■■□□ 2.32
CDH23-208ENST00000461841 TSPY3P0CV98 308 aa29.52■■■□□ 2.32
CDH23-208ENST00000461841 TSPY8P0CW00 308 aa29.52■■■□□ 2.32
CDH23-208ENST00000461841 CCDC125Q86Z20 511 aa29.52■■■□□ 2.32
CDH23-208ENST00000461841 SUPT20HQ8NEM7 779 aa29.52■■■□□ 2.32
CDH23-208ENST00000461841 ANKS1AQ92625 1134 aa29.52■■■□□ 2.32
CDH23-208ENST00000461841 TCP11L1Q9NUJ3 509 aa29.52■■■□□ 2.32
CDH23-208ENST00000461841 USP40Q9NVE5 1235 aa29.52■■■□□ 2.32
CDH23-208ENST00000461841 USP17L3A6NCW0 530 aa29.52■■■□□ 2.32
CDH23-208ENST00000461841 USP17L4A6NCW7 530 aa29.52■■■□□ 2.32
CDH23-208ENST00000461841 PICALMQ13492 652 aa29.52■■■□□ 2.32
CDH23-208ENST00000461841 MYSM1Q5VVJ2 828 aa29.52■■■□□ 2.32
CDH23-208ENST00000461841 USP17L1Q7RTZ2 530 aa29.52■■■□□ 2.32
CDH23-208ENST00000461841 RNF26Q9BY78 433 aaPredicted RBP29.52■■■□□ 2.32
CDH23-208ENST00000461841 DPEP1P16444 411 aa29.51■■■□□ 2.31
CDH23-208ENST00000461841 CDC42EP5Q6NZY7 148 aa29.51■■■□□ 2.31
CDH23-208ENST00000461841 KIAA0825Q8IV33 1275 aa29.51■■■□□ 2.31
CDH23-208ENST00000461841 MRIQ9BWK5 157 aa29.51■■■□□ 2.31
CDH23-208ENST00000461841 DDX4Q9NQI0 724 aaKnown RBP29.51■■■□□ 2.31
CDH23-208ENST00000461841 RTEL1Q9NZ71 1219 aa29.51■■■□□ 2.31
CDH23-208ENST00000461841 PLEKHA8P1O95397 391 aa29.5■■■□□ 2.31
CDH23-208ENST00000461841 LIG1P18858 919 aa29.5■■■□□ 2.31
CDH23-208ENST00000461841 CRKP46108 304 aa29.5■■■□□ 2.31
CDH23-208ENST00000461841 U2AF2P26368 475 aaKnown RBP eCLIP29.5■■■□□ 2.31
CDH23-208ENST00000461841 GRIPAP1Q4V328 841 aa29.5■■■□□ 2.31
CDH23-208ENST00000461841 CCDC178Q5BJE1 867 aa29.5■■■□□ 2.31
CDH23-208ENST00000461841 ADAMTSL1Q8N6G6 1762 aa29.5■■■□□ 2.31
CDH23-208ENST00000461841 TMTC3Q6ZXV5 915 aa29.49■■■□□ 2.31
CDH23-208ENST00000461841 ZDHHC15Q96MV8 337 aa29.49■■■□□ 2.31
CDH23-208ENST00000461841 PANK2Q9BZ23 570 aa29.49■■■□□ 2.31
CDH23-208ENST00000461841 KAT14Q9H8E8 782 aa29.49■■■□□ 2.31
CDH23-208ENST00000461841 CTCFLQ8NI51 663 aaPredicted RBP29.49■■■□□ 2.31
CDH23-208ENST00000461841 ZNF646O15015 1829 aaPredicted RBP29.49■■■□□ 2.31
CDH23-208ENST00000461841 PPIP5K2O43314 1243 aa29.48■■■□□ 2.31
CDH23-208ENST00000461841 POLR3EQ9NVU0 708 aa29.48■■■□□ 2.31
CDH23-208ENST00000461841 PRPF3O43395 683 aaKnown RBP29.47■■■□□ 2.31
CDH23-208ENST00000461841 LETM1O95202 739 aaPredicted RBP29.47■■■□□ 2.31
CDH23-208ENST00000461841 PKN1Q16512 942 aa29.47■■■□□ 2.31
CDH23-208ENST00000461841 CCDC93Q567U6 631 aa29.47■■■□□ 2.31
CDH23-208ENST00000461841 RTKN2Q8IZC4 609 aa29.47■■■□□ 2.31
CDH23-208ENST00000461841 CLIC4Q9Y696 253 aa29.47■■■□□ 2.31
CDH23-208ENST00000461841 MMP1P03956 469 aa29.47■■■□□ 2.31
CDH23-208ENST00000461841 HDLBPQ00341 1268 aaKnown RBP29.47■■■□□ 2.31
CDH23-208ENST00000461841 PNMA1Q8ND90 353 aa29.47■■■□□ 2.31
CDH23-208ENST00000461841 V9GY48 417 aaPredicted RBP29.47■■■□□ 2.31
CDH23-208ENST00000461841 AKAP17AQ02040 695 aaKnown RBP29.46■■■□□ 2.31
CDH23-208ENST00000461841 SRBD1Q8N5C6 995 aaKnown RBP29.46■■■□□ 2.31
CDH23-208ENST00000461841 LINC00301Q8NCQ3 95 aa29.46■■■□□ 2.31
CDH23-208ENST00000461841 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.46■■■□□ 2.31
CDH23-208ENST00000461841 RBSNQ9H1K0 784 aa29.46■■■□□ 2.31
CDH23-208ENST00000461841 KCNJ14Q9UNX9 436 aa29.46■■■□□ 2.31
CDH23-208ENST00000461841 YDJCA8MPS7 323 aa29.45■■■□□ 2.31
CDH23-208ENST00000461841 ZBTB7AO95365 584 aa29.45■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms