RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 AGTPBP1Q9UPW5 1226 aa11.16□□□□□ -0.62
BRCA1-207ENST00000461798 DOCK2Q92608 1830 aa11.15□□□□□ -0.62
BRCA1-207ENST00000461798 TRIM75PA6NK02 468 aa11.15□□□□□ -0.62
BRCA1-207ENST00000461798 TTLL13PA6NNM8 815 aa11.15□□□□□ -0.62
BRCA1-207ENST00000461798 MAP3K13O43283 966 aa11.15□□□□□ -0.62
BRCA1-207ENST00000461798 TTF1Q15361 905 aaPredicted RBP11.15□□□□□ -0.62
BRCA1-207ENST00000461798 SLC9C1Q4G0N8 1177 aa11.15□□□□□ -0.62
BRCA1-207ENST00000461798 GADL1Q6ZQY3 521 aa11.15□□□□□ -0.62
BRCA1-207ENST00000461798 CCDC84Q86UT8 332 aaPredicted RBP11.15□□□□□ -0.62
BRCA1-207ENST00000461798 MAGEB6Q8N7X4 407 aa11.15□□□□□ -0.62
BRCA1-207ENST00000461798 DNAJC18Q9H819 358 aa11.15□□□□□ -0.62
BRCA1-207ENST00000461798 AS3MTQ9HBK9 375 aa11.15□□□□□ -0.62
BRCA1-207ENST00000461798 PALD1Q9ULE6 856 aa11.15□□□□□ -0.62
BRCA1-207ENST00000461798 PDE4DIPQ5VU43 2346 aa11.14□□□□□ -0.63
BRCA1-207ENST00000461798 FMNL1O95466 1100 aaPredicted RBP11.14□□□□□ -0.63
BRCA1-207ENST00000461798 ASNSP08243 561 aa11.14□□□□□ -0.63
BRCA1-207ENST00000461798 OSBPP22059 807 aa11.14□□□□□ -0.63
BRCA1-207ENST00000461798 RIOK1Q9BRS2 568 aaKnown RBP11.14□□□□□ -0.63
BRCA1-207ENST00000461798 TMEM106CQ9BVX2 250 aa11.14□□□□□ -0.63
BRCA1-207ENST00000461798 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.14□□□□□ -0.63
BRCA1-207ENST00000461798 NDUFB9Q9Y6M9 179 aa11.14□□□□□ -0.63
BRCA1-207ENST00000461798 KIAA0100Q14667 2235 aaKnown RBP11.13□□□□□ -0.63
BRCA1-207ENST00000461798 C19orf81C9J6K1 198 aa11.13□□□□□ -0.63
BRCA1-207ENST00000461798 HLA-DOAP06340 250 aa11.13□□□□□ -0.63
BRCA1-207ENST00000461798 IFIT2P09913 472 aaKnown RBP11.13□□□□□ -0.63
BRCA1-207ENST00000461798 ATP5JP18859 108 aa11.13□□□□□ -0.63
BRCA1-207ENST00000461798 FCGRTP55899 365 aa11.13□□□□□ -0.63
BRCA1-207ENST00000461798 BACE1P56817 501 aa11.13□□□□□ -0.63
BRCA1-207ENST00000461798 JAG1P78504 1218 aa11.13□□□□□ -0.63
BRCA1-207ENST00000461798 PABPC4Q13310 644 aaKnown RBP eCLIP11.13□□□□□ -0.63
BRCA1-207ENST00000461798 TREML2Q5T2D2 321 aa11.13□□□□□ -0.63
BRCA1-207ENST00000461798 C20orf194Q5TEA3 1177 aa11.13□□□□□ -0.63
BRCA1-207ENST00000461798 TATDN1Q6P1N9 297 aa11.13□□□□□ -0.63
BRCA1-207ENST00000461798 MIGA1Q8NAN2 632 aa11.13□□□□□ -0.63
BRCA1-207ENST00000461798 SLAIN1Q8ND83 568 aa11.13□□□□□ -0.63
BRCA1-207ENST00000461798 EHD4Q9H223 541 aa11.13□□□□□ -0.63
BRCA1-207ENST00000461798 PNMA3Q9UL41 463 aa11.13□□□□□ -0.63
BRCA1-207ENST00000461798 PDE6AP16499 860 aa11.12□□□□□ -0.63
BRCA1-207ENST00000461798 EN2P19622 333 aaPredicted RBP11.12□□□□□ -0.63
BRCA1-207ENST00000461798 HOXA7P31268 230 aaPredicted RBP11.12□□□□□ -0.63
BRCA1-207ENST00000461798 GCLCP48506 637 aaPredicted RBP11.12□□□□□ -0.63
BRCA1-207ENST00000461798 HMGCS2P54868 508 aa11.12□□□□□ -0.63
BRCA1-207ENST00000461798 SLC9C2Q5TAH2 1124 aa11.12□□□□□ -0.63
BRCA1-207ENST00000461798 PRPF38BQ5VTL8 546 aaKnown RBP11.12□□□□□ -0.63
BRCA1-207ENST00000461798 TTC6Q86TZ1 520 aa11.12□□□□□ -0.63
BRCA1-207ENST00000461798 CRACR2BQ8N4Y2 399 aaPredicted RBP11.12□□□□□ -0.63
BRCA1-207ENST00000461798 SMCR8Q8TEV9 937 aaPredicted RBP11.12□□□□□ -0.63
BRCA1-207ENST00000461798 SH3TC2Q8TF17 1288 aa11.12□□□□□ -0.63
BRCA1-207ENST00000461798 SAP30BPQ9UHR5 308 aaKnown RBP11.12□□□□□ -0.63
BRCA1-207ENST00000461798 TAOK2Q9UL54 1235 aa11.12□□□□□ -0.63
BRCA1-207ENST00000461798 ZBTB21Q9ULJ3 1066 aa11.12□□□□□ -0.63
BRCA1-207ENST00000461798 HTTP42858 3142 aa11.12□□□□□ -0.63
BRCA1-207ENST00000461798 MYPNQ86TC9 1320 aa11.11□□□□□ -0.63
BRCA1-207ENST00000461798 MAST2Q6P0Q8 1798 aa11.11□□□□□ -0.63
BRCA1-207ENST00000461798 DOCK1Q14185 1865 aa11.11□□□□□ -0.63
BRCA1-207ENST00000461798 MAGEB6P1A0A0J9YX57 407 aa11.11□□□□□ -0.63
BRCA1-207ENST00000461798 TCRBV5S4A2TA0A5A2 114 aa11.11□□□□□ -0.63
BRCA1-207ENST00000461798 APBB1O00213 710 aa11.11□□□□□ -0.63
BRCA1-207ENST00000461798 GOLIM4O00461 696 aa11.11□□□□□ -0.63
BRCA1-207ENST00000461798 GRK4P32298 578 aa11.11□□□□□ -0.63
BRCA1-207ENST00000461798 USP5P45974 858 aa11.11□□□□□ -0.63
BRCA1-207ENST00000461798 IRF5Q13568 498 aa11.11□□□□□ -0.63
BRCA1-207ENST00000461798 FAM110CQ1W6H9 321 aa11.11□□□□□ -0.63
BRCA1-207ENST00000461798 RAET1EQ8TD07 263 aa11.11□□□□□ -0.63
BRCA1-207ENST00000461798 TRIM34Q9BYJ4 488 aa11.11□□□□□ -0.63
BRCA1-207ENST00000461798 SERPINB13Q9UIV8 391 aa11.11□□□□□ -0.63
BRCA1-207ENST00000461798 PHIPQ8WWQ0 1821 aa11.11□□□□□ -0.63
BRCA1-207ENST00000461798 USP17L10C9JJH3 530 aa11.1□□□□□ -0.63
BRCA1-207ENST00000461798 PRKCZQ05513 592 aa11.1□□□□□ -0.63
BRCA1-207ENST00000461798 GABPAQ06546 454 aa11.1□□□□□ -0.63
BRCA1-207ENST00000461798 PXYLP1Q8TE99 480 aa11.1□□□□□ -0.63
BRCA1-207ENST00000461798 HAUS7Q99871 368 aa11.1□□□□□ -0.63
BRCA1-207ENST00000461798 CRNKL1Q9BZJ0 848 aaKnown RBP11.1□□□□□ -0.63
BRCA1-207ENST00000461798 LRRCC1Q9C099 1032 aa11.1□□□□□ -0.63
BRCA1-207ENST00000461798 ASCC2Q9H1I8 757 aaPredicted RBP11.1□□□□□ -0.63
BRCA1-207ENST00000461798 DCTPP1Q9H773 170 aa11.1□□□□□ -0.63
BRCA1-207ENST00000461798 MORF4L1Q9UBU8 362 aa11.1□□□□□ -0.63
BRCA1-207ENST00000461798 GABRQQ9UN88 632 aa11.1□□□□□ -0.63
BRCA1-207ENST00000461798 TNRC18O15417 2968 aaPredicted RBP11.1□□□□□ -0.63
BRCA1-207ENST00000461798 ZNF532Q9HCE3 1301 aa11.09□□□□□ -0.63
BRCA1-207ENST00000461798 TNPO2O14787 897 aaKnown RBP11.09□□□□□ -0.63
BRCA1-207ENST00000461798 ECM2O94769 699 aaPredicted RBP11.09□□□□□ -0.63
BRCA1-207ENST00000461798 GDF11O95390 407 aa11.09□□□□□ -0.63
BRCA1-207ENST00000461798 GJB1P08034 283 aa11.09□□□□□ -0.63
BRCA1-207ENST00000461798 CAPN2P17655 700 aa11.09□□□□□ -0.63
BRCA1-207ENST00000461798 ADD2P35612 726 aa11.09□□□□□ -0.63
BRCA1-207ENST00000461798 FLT3LGP49771 235 aa11.09□□□□□ -0.63
BRCA1-207ENST00000461798 PLCD1P51178 756 aa11.09□□□□□ -0.63
BRCA1-207ENST00000461798 MTMR2Q13614 643 aa11.09□□□□□ -0.63
BRCA1-207ENST00000461798 MTFR1Q15390 333 aa11.09□□□□□ -0.63
BRCA1-207ENST00000461798 SHROOM1Q2M3G4 852 aaPredicted RBP11.09□□□□□ -0.63
BRCA1-207ENST00000461798 SLC4A8Q2Y0W8 1093 aa11.09□□□□□ -0.63
BRCA1-207ENST00000461798 IER5LQ5T953 404 aa11.09□□□□□ -0.63
BRCA1-207ENST00000461798 ANKRD13CQ8N6S4 541 aa11.09□□□□□ -0.63
BRCA1-207ENST00000461798 C12orf42Q96LP6 360 aa11.09□□□□□ -0.63
BRCA1-207ENST00000461798 DNAJC2Q99543 621 aaKnown RBP11.09□□□□□ -0.63
BRCA1-207ENST00000461798 P2RX7Q99572 595 aaKnown RBP11.09□□□□□ -0.63
BRCA1-207ENST00000461798 BOLA2Q9H3K6 86 aa11.09□□□□□ -0.63
BRCA1-207ENST00000461798 EMILIN3Q9NT22 766 aa11.09□□□□□ -0.63
BRCA1-207ENST00000461798 PAG1Q9NWQ8 432 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms