RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 HDXQ7Z353 690 aa4.6□□□□□ -1.67
HDAC6-212ENST00000461608 RBBP8NLQ8NC74 664 aaPredicted RBP4.6□□□□□ -1.67
HDAC6-212ENST00000461608 DHX38Q92620 1227 aaKnown RBP4.6□□□□□ -1.67
HDAC6-212ENST00000461608 KCNB2Q92953 911 aa4.6□□□□□ -1.67
HDAC6-212ENST00000461608 MKL1Q969V6 931 aa4.6□□□□□ -1.67
HDAC6-212ENST00000461608 FERD3LQ96RJ6 166 aa4.6□□□□□ -1.67
HDAC6-212ENST00000461608 CRBNQ96SW2 442 aa4.6□□□□□ -1.67
HDAC6-212ENST00000461608 DNAJC2Q99543 621 aaKnown RBP4.6□□□□□ -1.67
HDAC6-212ENST00000461608 RUSC1Q9BVN2 902 aa4.6□□□□□ -1.67
HDAC6-212ENST00000461608 YIPF2Q9BWQ6 316 aa4.6□□□□□ -1.67
HDAC6-212ENST00000461608 RNF208Q9H0X6 261 aa4.6□□□□□ -1.67
HDAC6-212ENST00000461608 OSBPL2Q9H1P3 480 aa4.6□□□□□ -1.67
HDAC6-212ENST00000461608 ZNF408Q9H9D4 720 aa4.6□□□□□ -1.67
HDAC6-212ENST00000461608 PRKAG3Q9UGI9 489 aa4.6□□□□□ -1.67
HDAC6-212ENST00000461608 ZNRF3Q9ULT6 936 aa4.6□□□□□ -1.67
HDAC6-212ENST00000461608 PCDHB5Q9Y5E4 795 aa4.6□□□□□ -1.67
HDAC6-212ENST00000461608 MEIS3P2A8K0S8 358 aa4.59□□□□□ -1.67
HDAC6-212ENST00000461608 ATE1O95260 518 aa4.59□□□□□ -1.67
HDAC6-212ENST00000461608 SLFN14P0C7P3 912 aa4.59□□□□□ -1.67
HDAC6-212ENST00000461608 ITGB5P18084 799 aa4.59□□□□□ -1.67
HDAC6-212ENST00000461608 MAOBP27338 520 aa4.59□□□□□ -1.67
HDAC6-212ENST00000461608 MCM4P33991 863 aa4.59□□□□□ -1.67
HDAC6-212ENST00000461608 EIF6P56537 245 aaKnown RBP4.59□□□□□ -1.67
HDAC6-212ENST00000461608 KIF4BQ2VIQ3 1234 aa4.59□□□□□ -1.67
HDAC6-212ENST00000461608 CBLL1Q75N03 491 aa4.59□□□□□ -1.67
HDAC6-212ENST00000461608 ZSCAN18Q8TBC5 510 aaPredicted RBP4.59□□□□□ -1.67
HDAC6-212ENST00000461608 JARID2Q92833 1246 aaPredicted RBP4.59□□□□□ -1.67
HDAC6-212ENST00000461608 ELMO3Q96BJ8 720 aa4.59□□□□□ -1.67
HDAC6-212ENST00000461608 TRIM55Q9BYV6 548 aa4.59□□□□□ -1.67
HDAC6-212ENST00000461608 LNPKQ9C0E8 428 aa4.59□□□□□ -1.67
HDAC6-212ENST00000461608 PRR36Q9H6K5 1346 aa4.59□□□□□ -1.67
HDAC6-212ENST00000461608 EHMT1Q9H9B1 1298 aa4.59□□□□□ -1.67
HDAC6-212ENST00000461608 PCDHA4Q9UN74 947 aa4.59□□□□□ -1.67
HDAC6-212ENST00000461608 SLC12A7Q9Y666 1083 aa4.59□□□□□ -1.67
HDAC6-212ENST00000461608 LOC100289279A0A1B0GTE1 492 aa4.58□□□□□ -1.68
HDAC6-212ENST00000461608 PRNPP04156 253 aa4.58□□□□□ -1.68
HDAC6-212ENST00000461608 F13BP05160 661 aa4.58□□□□□ -1.68
HDAC6-212ENST00000461608 CTSBP07858 339 aa4.58□□□□□ -1.68
HDAC6-212ENST00000461608 GIPRP48546 466 aa4.58□□□□□ -1.68
HDAC6-212ENST00000461608 WIPI1Q5MNZ9 446 aaPredicted RBP4.58□□□□□ -1.68
HDAC6-212ENST00000461608 RASIP1Q5U651 963 aa4.58□□□□□ -1.68
HDAC6-212ENST00000461608 PAOXQ6QHF9 649 aa4.58□□□□□ -1.68
HDAC6-212ENST00000461608 LRP10Q7Z4F1 713 aa4.58□□□□□ -1.68
HDAC6-212ENST00000461608 TAB3Q8N5C8 712 aaPredicted RBP4.58□□□□□ -1.68
HDAC6-212ENST00000461608 C19orf47Q8N9M1 422 aaKnown RBP4.58□□□□□ -1.68
HDAC6-212ENST00000461608 GRIN3AQ8TCU5 1115 aa4.58□□□□□ -1.68
HDAC6-212ENST00000461608 STK35Q8TDR2 534 aa4.58□□□□□ -1.68
HDAC6-212ENST00000461608 GPBAR1Q8TDU6 330 aa4.58□□□□□ -1.68
HDAC6-212ENST00000461608 SHDQ96IW2 340 aa4.58□□□□□ -1.68
HDAC6-212ENST00000461608 TOX2Q96NM4 488 aa4.58□□□□□ -1.68
HDAC6-212ENST00000461608 USP26Q9BXU7 913 aa4.58□□□□□ -1.68
HDAC6-212ENST00000461608 TMPRSS13Q9BYE2 586 aa4.58□□□□□ -1.68
HDAC6-212ENST00000461608 KRTAP4-5Q9BYR2 181 aa4.58□□□□□ -1.68
HDAC6-212ENST00000461608 SIRPGQ9P1W8 387 aa4.58□□□□□ -1.68
HDAC6-212ENST00000461608 ADAM30Q9UKF2 790 aa4.58□□□□□ -1.68
HDAC6-212ENST00000461608 TMA7Q9Y2S6 64 aaKnown RBP4.58□□□□□ -1.68
HDAC6-212ENST00000461608 TLR3O15455 904 aaKnown RBP4.57□□□□□ -1.68
HDAC6-212ENST00000461608 TIAF1O95411 115 aa4.57□□□□□ -1.68
HDAC6-212ENST00000461608 DRD2P14416 443 aa4.57□□□□□ -1.68
HDAC6-212ENST00000461608 MAP4P27816 1152 aaKnown RBP4.57□□□□□ -1.68
HDAC6-212ENST00000461608 ERVK-24P63145 666 aa4.57□□□□□ -1.68
HDAC6-212ENST00000461608 NFKBIBQ15653 356 aa4.57□□□□□ -1.68
HDAC6-212ENST00000461608 DUSP27Q5VZP5 1158 aa4.57□□□□□ -1.68
HDAC6-212ENST00000461608 PMFBP1Q8TBY8 1022 aa4.57□□□□□ -1.68
HDAC6-212ENST00000461608 TM9SF2Q99805 663 aa4.57□□□□□ -1.68
HDAC6-212ENST00000461608 CCDC86Q9H6F5 360 aaKnown RBP4.57□□□□□ -1.68
HDAC6-212ENST00000461608 CYP4F12Q9HCS2 524 aa4.57□□□□□ -1.68
HDAC6-212ENST00000461608 BRMS1Q9HCU9 246 aa4.57□□□□□ -1.68
HDAC6-212ENST00000461608 PCDHB14Q9Y5E9 798 aa4.57□□□□□ -1.68
HDAC6-212ENST00000461608 MEGF11A6BM72 1044 aa4.56□□□□□ -1.68
HDAC6-212ENST00000461608 ADMP35318 185 aa4.56□□□□□ -1.68
HDAC6-212ENST00000461608 USP11P51784 963 aa4.56□□□□□ -1.68
HDAC6-212ENST00000461608 ID3Q02535 119 aa4.56□□□□□ -1.68
HDAC6-212ENST00000461608 SERINC3Q13530 473 aa4.56□□□□□ -1.68
HDAC6-212ENST00000461608 RAB33AQ14088 237 aa4.56□□□□□ -1.68
HDAC6-212ENST00000461608 PLCL1Q15111 1095 aa4.56□□□□□ -1.68
HDAC6-212ENST00000461608 MSMPQ1L6U9 139 aa4.56□□□□□ -1.68
HDAC6-212ENST00000461608 EXOSC6Q5RKV6 272 aaKnown RBP4.56□□□□□ -1.68
HDAC6-212ENST00000461608 CDPF1Q6NVV7 123 aa4.56□□□□□ -1.68
HDAC6-212ENST00000461608 SPOCD1Q6ZMY3 1216 aa4.56□□□□□ -1.68
HDAC6-212ENST00000461608 GK5Q6ZS86 529 aa4.56□□□□□ -1.68
HDAC6-212ENST00000461608 ANKS3Q6ZW76 656 aa4.56□□□□□ -1.68
HDAC6-212ENST00000461608 LSRQ86X29 649 aaPredicted RBP4.56□□□□□ -1.68
HDAC6-212ENST00000461608 KCT2Q8NC54 265 aa4.56□□□□□ -1.68
HDAC6-212ENST00000461608 TMEM40Q8WWA1 233 aa4.56□□□□□ -1.68
HDAC6-212ENST00000461608 ANAPC16Q96DE5 110 aa4.56□□□□□ -1.68
HDAC6-212ENST00000461608 PLPPR2Q96GM1 343 aa4.56□□□□□ -1.68
HDAC6-212ENST00000461608 MRFAP1L1Q96HT8 127 aa4.56□□□□□ -1.68
HDAC6-212ENST00000461608 WDR18Q9BV38 432 aa4.56□□□□□ -1.68
HDAC6-212ENST00000461608 ATXN3LQ9H3M9 355 aa4.56□□□□□ -1.68
HDAC6-212ENST00000461608 SUGCTQ9HAC7 445 aa4.56□□□□□ -1.68
HDAC6-212ENST00000461608 RAD18Q9NS91 495 aa4.56□□□□□ -1.68
HDAC6-212ENST00000461608 ACTR10Q9NZ32 417 aa4.56□□□□□ -1.68
HDAC6-212ENST00000461608 GMIPQ9P107 970 aa4.56□□□□□ -1.68
HDAC6-212ENST00000461608 PPT2Q9UMR5 302 aa4.56□□□□□ -1.68
HDAC6-212ENST00000461608 B8ZZF3 427 aa4.55□□□□□ -1.68
HDAC6-212ENST00000461608 GFRA2O00451 464 aa4.55□□□□□ -1.68
HDAC6-212ENST00000461608 FANCGO15287 622 aa4.55□□□□□ -1.68
HDAC6-212ENST00000461608 ZNF862O60290 1169 aa4.55□□□□□ -1.68
HDAC6-212ENST00000461608 AOC2O75106 756 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms