RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 PORCNQ9H237 461 aa16.98■□□□□ 0.31
PABPC4-208ENST00000461578 GDF11O95390 407 aa16.97■□□□□ 0.31
PABPC4-208ENST00000461578 MAP4K4O95819 1239 aaPredicted RBP16.97■□□□□ 0.31
PABPC4-208ENST00000461578 MAPK4P31152 587 aa16.97■□□□□ 0.31
PABPC4-208ENST00000461578 HOXA7P31268 230 aaPredicted RBP16.97■□□□□ 0.31
PABPC4-208ENST00000461578 RGS2P41220 211 aa16.97■□□□□ 0.31
PABPC4-208ENST00000461578 ERVK-9P63128 1117 aa16.97■□□□□ 0.31
PABPC4-208ENST00000461578 ERVK-24P63145 666 aa16.97■□□□□ 0.31
PABPC4-208ENST00000461578 LHX8Q68G74 356 aa16.97■□□□□ 0.31
PABPC4-208ENST00000461578 GPR142Q7Z601 462 aa16.97■□□□□ 0.31
PABPC4-208ENST00000461578 TRMT44Q8IYL2 757 aaKnown RBP16.97■□□□□ 0.31
PABPC4-208ENST00000461578 GUCD1Q96NT3 240 aa16.97■□□□□ 0.31
PABPC4-208ENST00000461578 CWC22Q9HCG8 908 aaKnown RBP16.97■□□□□ 0.31
PABPC4-208ENST00000461578 PI4KBQ9UBF8 816 aa16.97■□□□□ 0.31
PABPC4-208ENST00000461578 RBPJLQ9UBG7 517 aa16.97■□□□□ 0.31
PABPC4-208ENST00000461578 NOB1Q9ULX3 412 aaKnown RBP16.97■□□□□ 0.31
PABPC4-208ENST00000461578 ASNSP08243 561 aa16.96■□□□□ 0.31
PABPC4-208ENST00000461578 USP6NLQ92738 828 aa16.96■□□□□ 0.31
PABPC4-208ENST00000461578 APBA2Q99767 749 aa16.96■□□□□ 0.31
PABPC4-208ENST00000461578 NOL10Q9BSC4 688 aaKnown RBP16.96■□□□□ 0.31
PABPC4-208ENST00000461578 SENP6Q9GZR1 1112 aaPredicted RBP16.96■□□□□ 0.31
PABPC4-208ENST00000461578 AATFQ9NY61 560 aaKnown RBP eCLIP16.96■□□□□ 0.31
PABPC4-208ENST00000461578 LRP2BPQ9P2M1 347 aa16.96■□□□□ 0.31
PABPC4-208ENST00000461578 HDAC5Q9UQL6 1122 aa16.96■□□□□ 0.31
PABPC4-208ENST00000461578 NDUFB9Q9Y6M9 179 aa16.96■□□□□ 0.31
PABPC4-208ENST00000461578 FRMPD3Q5JV73 1810 aa16.96■□□□□ 0.3
PABPC4-208ENST00000461578 USP17L10C9JJH3 530 aa16.95■□□□□ 0.3
PABPC4-208ENST00000461578 SRGAP3O43295 1099 aa16.95■□□□□ 0.3
PABPC4-208ENST00000461578 MORN1Q5T089 497 aa16.95■□□□□ 0.3
PABPC4-208ENST00000461578 PLEKHH3Q7Z736 793 aa16.95■□□□□ 0.3
PABPC4-208ENST00000461578 MAPKAPK5Q8IW41 473 aa16.95■□□□□ 0.3
PABPC4-208ENST00000461578 CRACR2BQ8N4Y2 399 aaPredicted RBP16.95■□□□□ 0.3
PABPC4-208ENST00000461578 LBHD1Q9BQE6 289 aaPredicted RBP16.95■□□□□ 0.3
PABPC4-208ENST00000461578 TRIM34Q9BYJ4 488 aa16.95■□□□□ 0.3
PABPC4-208ENST00000461578 DNAJC18Q9H819 358 aa16.95■□□□□ 0.3
PABPC4-208ENST00000461578 C19orf81C9J6K1 198 aa16.94■□□□□ 0.3
PABPC4-208ENST00000461578 POTEB2H3BUK9 544 aa16.94■□□□□ 0.3
PABPC4-208ENST00000461578 MCAMP43121 646 aa16.94■□□□□ 0.3
PABPC4-208ENST00000461578 ATN1P54259 1190 aaPredicted RBP16.94■□□□□ 0.3
PABPC4-208ENST00000461578 SLFN5Q08AF3 891 aa16.94■□□□□ 0.3
PABPC4-208ENST00000461578 WDR78Q5VTH9 848 aa16.94■□□□□ 0.3
PABPC4-208ENST00000461578 POTEEQ6S8J3 1075 aa16.94■□□□□ 0.3
PABPC4-208ENST00000461578 TGFBRAP1Q8WUH2 860 aa16.94■□□□□ 0.3
PABPC4-208ENST00000461578 CDCA7LQ96GN5 454 aa16.94■□□□□ 0.3
PABPC4-208ENST00000461578 DHX36Q9H2U1 1008 aaKnown RBP16.94■□□□□ 0.3
PABPC4-208ENST00000461578 MAST2Q6P0Q8 1798 aa16.93■□□□□ 0.3
PABPC4-208ENST00000461578 ARID4AP29374 1257 aaPredicted RBP16.93■□□□□ 0.3
PABPC4-208ENST00000461578 ZYXQ15942 572 aaKnown RBP16.93■□□□□ 0.3
PABPC4-208ENST00000461578 API5Q9BZZ5 524 aaKnown RBP16.93■□□□□ 0.3
PABPC4-208ENST00000461578 SNRKQ9NRH2 765 aa16.93■□□□□ 0.3
PABPC4-208ENST00000461578 PALD1Q9ULE6 856 aa16.93■□□□□ 0.3
PABPC4-208ENST00000461578 ZBTB21Q9ULJ3 1066 aa16.93■□□□□ 0.3
PABPC4-208ENST00000461578 CNGA1P29973 690 aa16.92■□□□□ 0.3
PABPC4-208ENST00000461578 MAP2K5Q13163 448 aa16.92■□□□□ 0.3
PABPC4-208ENST00000461578 ZNF697Q5TEC3 545 aa16.92■□□□□ 0.3
PABPC4-208ENST00000461578 FAM109BQ6ICB4 259 aaPredicted RBP16.92■□□□□ 0.3
PABPC4-208ENST00000461578 NAA16Q6N069 864 aaPredicted RBP16.92■□□□□ 0.3
PABPC4-208ENST00000461578 EMILIN3Q9NT22 766 aa16.92■□□□□ 0.3
PABPC4-208ENST00000461578 FLRT1Q9NZU1 646 aa16.92■□□□□ 0.3
PABPC4-208ENST00000461578 SAP30BPQ9UHR5 308 aaKnown RBP16.92■□□□□ 0.3
PABPC4-208ENST00000461578 CDK5RAP2Q96SN8 1893 aa16.92■□□□□ 0.3
PABPC4-208ENST00000461578 FLT1P17948 1338 aa16.92■□□□□ 0.3
PABPC4-208ENST00000461578 BAG3O95817 575 aa16.91■□□□□ 0.3
PABPC4-208ENST00000461578 MFSD14CQ5VZR4 134 aa16.91■□□□□ 0.3
PABPC4-208ENST00000461578 USP17L2Q6R6M4 530 aa16.91■□□□□ 0.3
PABPC4-208ENST00000461578 GTF3C2Q8WUA4 911 aaPredicted RBP16.91■□□□□ 0.3
PABPC4-208ENST00000461578 EDC3Q96F86 508 aaKnown RBP16.91■□□□□ 0.3
PABPC4-208ENST00000461578 DNAH12Q6ZR08 3092 aa16.9■□□□□ 0.3
PABPC4-208ENST00000461578 CNMDO75829 334 aa16.9■□□□□ 0.3
PABPC4-208ENST00000461578 PLCG2P16885 1265 aa16.9■□□□□ 0.3
PABPC4-208ENST00000461578 ADGRA1Q86SQ6 560 aa16.9■□□□□ 0.3
PABPC4-208ENST00000461578 FOXP4Q8IVH2 680 aaPredicted RBP16.9■□□□□ 0.3
PABPC4-208ENST00000461578 FEZ1Q99689 392 aa16.9■□□□□ 0.3
PABPC4-208ENST00000461578 PRKAG2Q9UGJ0 569 aa16.9■□□□□ 0.3
PABPC4-208ENST00000461578 DDX20Q9UHI6 824 aaKnown RBP16.9■□□□□ 0.3
PABPC4-208ENST00000461578 LAMA2P24043 3122 aaKnown RBP16.9■□□□□ 0.3
PABPC4-208ENST00000461578 FOCADQ5VW36 1801 aa16.89■□□□□ 0.29
PABPC4-208ENST00000461578 GH2P01242 217 aa16.89■□□□□ 0.29
PABPC4-208ENST00000461578 UQCRFS1P1P0C7P4 283 aa16.89■□□□□ 0.29
PABPC4-208ENST00000461578 RTP1P59025 263 aa16.89■□□□□ 0.29
PABPC4-208ENST00000461578 ATP11BQ9Y2G3 1177 aa16.89■□□□□ 0.29
PABPC4-208ENST00000461578 RABGAP1Q9Y3P9 1069 aa16.89■□□□□ 0.29
PABPC4-208ENST00000461578 GLRX3O76003 335 aaKnown RBP16.88■□□□□ 0.29
PABPC4-208ENST00000461578 HLA-DOAP06340 250 aa16.88■□□□□ 0.29
PABPC4-208ENST00000461578 GNAI3P08754 354 aa16.88■□□□□ 0.29
PABPC4-208ENST00000461578 CYP2C19P33261 490 aa16.88■□□□□ 0.29
PABPC4-208ENST00000461578 CCNA1P78396 465 aa16.88■□□□□ 0.29
PABPC4-208ENST00000461578 ATP2B2Q01814 1243 aa16.88■□□□□ 0.29
PABPC4-208ENST00000461578 MTX1Q13505 466 aa16.88■□□□□ 0.29
PABPC4-208ENST00000461578 METTL16Q86W50 562 aaKnown RBP16.88■□□□□ 0.29
PABPC4-208ENST00000461578 NPLOC4Q8TAT6 608 aa16.88■□□□□ 0.29
PABPC4-208ENST00000461578 CDX2Q99626 313 aaPredicted RBP16.88■□□□□ 0.29
PABPC4-208ENST00000461578 GINM1Q9NU53 330 aa16.88■□□□□ 0.29
PABPC4-208ENST00000461578 LTBP2Q14767 1821 aa16.88■□□□□ 0.29
PABPC4-208ENST00000461578 MYO5AQ9Y4I1 1855 aaKnown RBP16.88■□□□□ 0.29
PABPC4-208ENST00000461578 SLC15A5A6NIM6 579 aa16.87■□□□□ 0.29
PABPC4-208ENST00000461578 USP17L15C9J2P7 530 aa16.87■□□□□ 0.29
PABPC4-208ENST00000461578 USP17L13C9JLJ4 530 aa16.87■□□□□ 0.29
PABPC4-208ENST00000461578 USP17L11C9JVI0 530 aa16.87■□□□□ 0.29
PABPC4-208ENST00000461578 USP17L18D6R9N7 530 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms