RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 AKT1S1Q96B36 256 aa23.4■■□□□ 1.34
CCM2-203ENST00000461377 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.4■■□□□ 1.34
CCM2-203ENST00000461377 POLLQ9UGP5 575 aa23.4■■□□□ 1.34
CCM2-203ENST00000461377 LTBP1Q14766 1721 aa23.4■■□□□ 1.34
CCM2-203ENST00000461377 CMA1P23946 247 aa23.39■■□□□ 1.33
CCM2-203ENST00000461377 MSNP26038 577 aaKnown RBP23.39■■□□□ 1.33
CCM2-203ENST00000461377 USP5P45974 858 aa23.39■■□□□ 1.33
CCM2-203ENST00000461377 DIS3L2Q8IYB7 885 aaKnown RBP23.39■■□□□ 1.33
CCM2-203ENST00000461377 FOXP1Q9H334 677 aaPredicted RBP23.39■■□□□ 1.33
CCM2-203ENST00000461377 KCNJ14Q9UNX9 436 aa23.39■■□□□ 1.33
CCM2-203ENST00000461377 ROBO3Q96MS0 1386 aa23.39■■□□□ 1.33
CCM2-203ENST00000461377 WDHD1O75717 1129 aaPredicted RBP23.38■■□□□ 1.33
CCM2-203ENST00000461377 LUZP1Q86V48 1076 aa23.38■■□□□ 1.33
CCM2-203ENST00000461377 NOL10Q9BSC4 688 aaKnown RBP23.38■■□□□ 1.33
CCM2-203ENST00000461377 RTFDC1Q9BY42 306 aaPredicted RBP23.38■■□□□ 1.33
CCM2-203ENST00000461377 ZKSCAN5Q9Y2L8 839 aa23.38■■□□□ 1.33
CCM2-203ENST00000461377 BTBD18B2RXH4 712 aa23.38■■□□□ 1.33
CCM2-203ENST00000461377 FAM47AQ5JRC9 791 aa23.38■■□□□ 1.33
CCM2-203ENST00000461377 CERS3Q8IU89 383 aa23.38■■□□□ 1.33
CCM2-203ENST00000461377 JMYQ8N9B5 988 aa23.38■■□□□ 1.33
CCM2-203ENST00000461377 DNAJC25Q9H1X3 360 aa23.38■■□□□ 1.33
CCM2-203ENST00000461377 PPEF1O14829 653 aaPredicted RBP23.37■■□□□ 1.33
CCM2-203ENST00000461377 PRPF3O43395 683 aaKnown RBP23.37■■□□□ 1.33
CCM2-203ENST00000461377 PTMAP06454 111 aaKnown RBP23.37■■□□□ 1.33
CCM2-203ENST00000461377 STX1AQ16623 288 aa23.37■■□□□ 1.33
CCM2-203ENST00000461377 SP8Q8IXZ3 490 aa23.37■■□□□ 1.33
CCM2-203ENST00000461377 NLGN1Q8N2Q7 840 aa23.37■■□□□ 1.33
CCM2-203ENST00000461377 NRXN2Q9P2S2 1712 aa23.37■■□□□ 1.33
CCM2-203ENST00000461377 NMT2O60551 498 aa23.36■■□□□ 1.33
CCM2-203ENST00000461377 MARCKSP29966 332 aaPredicted RBP23.36■■□□□ 1.33
CCM2-203ENST00000461377 PKN1Q16512 942 aa23.36■■□□□ 1.33
CCM2-203ENST00000461377 ZNF772Q68DY9 489 aaPredicted RBP23.36■■□□□ 1.33
CCM2-203ENST00000461377 TMTC3Q6ZXV5 915 aa23.36■■□□□ 1.33
CCM2-203ENST00000461377 COL23A1Q86Y22 540 aaPredicted RBP23.36■■□□□ 1.33
CCM2-203ENST00000461377 ANKRD31Q8N7Z5 1873 aa23.36■■□□□ 1.33
CCM2-203ENST00000461377 PLEKHA8P1O95397 391 aa23.36■■□□□ 1.33
CCM2-203ENST00000461377 ZNF165P49910 485 aa23.36■■□□□ 1.33
CCM2-203ENST00000461377 AKAP17AQ02040 695 aaKnown RBP23.36■■□□□ 1.33
CCM2-203ENST00000461377 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.36■■□□□ 1.33
CCM2-203ENST00000461377 EP400Q96L91 3159 aa23.36■■□□□ 1.33
CCM2-203ENST00000461377 TSPY2A6NKD2 308 aa23.35■■□□□ 1.33
CCM2-203ENST00000461377 PFKFB1P16118 471 aa23.35■■□□□ 1.33
CCM2-203ENST00000461377 SHISA4Q96DD7 197 aa23.34■■□□□ 1.33
CCM2-203ENST00000461377 GPR75-ASB3A0A0A6YYF3 556 aa23.34■■□□□ 1.33
CCM2-203ENST00000461377 FAM237AA0A1B0GTK4 181 aa23.34■■□□□ 1.33
CCM2-203ENST00000461377 BTDP43251 543 aa23.34■■□□□ 1.33
CCM2-203ENST00000461377 TOB1P50616 345 aaPredicted RBP23.34■■□□□ 1.33
CCM2-203ENST00000461377 RCSD1Q6JBY9 416 aa23.34■■□□□ 1.33
CCM2-203ENST00000461377 TBC1D22AQ8WUA7 517 aa23.34■■□□□ 1.33
CCM2-203ENST00000461377 TGFBRAP1Q8WUH2 860 aa23.34■■□□□ 1.33
CCM2-203ENST00000461377 SDF4Q9BRK5 362 aa23.34■■□□□ 1.33
CCM2-203ENST00000461377 ATP6V0A2Q9Y487 856 aa23.34■■□□□ 1.33
CCM2-203ENST00000461377 NAV1Q8NEY1 1877 aa23.34■■□□□ 1.33
CCM2-203ENST00000461377 FAM205AQ6ZU69 1335 aa23.33■■□□□ 1.33
CCM2-203ENST00000461377 C6orf229H3BNL8 230 aa23.33■■□□□ 1.33
CCM2-203ENST00000461377 ZNF202O95125 648 aa23.33■■□□□ 1.33
CCM2-203ENST00000461377 APBA3O96018 575 aa23.33■■□□□ 1.33
CCM2-203ENST00000461377 PLCB2Q00722 1185 aa23.33■■□□□ 1.33
CCM2-203ENST00000461377 RILPL1Q5EBL4 403 aa23.33■■□□□ 1.33
CCM2-203ENST00000461377 AMOTL1Q8IY63 956 aa23.33■■□□□ 1.33
CCM2-203ENST00000461377 FAM163AQ96GL9 167 aaPredicted RBP23.33■■□□□ 1.33
CCM2-203ENST00000461377 HPSEQ9Y251 543 aa23.33■■□□□ 1.33
CCM2-203ENST00000461377 CNTNAP5Q8WYK1 1306 aa23.33■■□□□ 1.32
CCM2-203ENST00000461377 CUTAO60888 179 aa23.32■■□□□ 1.32
CCM2-203ENST00000461377 XBP1P17861 261 aa23.32■■□□□ 1.32
CCM2-203ENST00000461377 SLC4A8Q2Y0W8 1093 aa23.32■■□□□ 1.32
CCM2-203ENST00000461377 MFSD14BQ5SR56 506 aa23.32■■□□□ 1.32
CCM2-203ENST00000461377 C11orf57Q6ZUT1 292 aaPredicted RBP23.32■■□□□ 1.32
CCM2-203ENST00000461377 CTCFLQ8NI51 663 aaPredicted RBP23.32■■□□□ 1.32
CCM2-203ENST00000461377 DYNLL2Q96FJ2 89 aa23.32■■□□□ 1.32
CCM2-203ENST00000461377 ANO10Q9NW15 660 aa23.32■■□□□ 1.32
CCM2-203ENST00000461377 ZNF500O60304 480 aaPredicted RBP23.32■■□□□ 1.32
CCM2-203ENST00000461377 SRGNP10124 158 aa23.32■■□□□ 1.32
CCM2-203ENST00000461377 NR5A1Q13285 461 aa23.32■■□□□ 1.32
CCM2-203ENST00000461377 IQCB1Q15051 598 aa23.32■■□□□ 1.32
CCM2-203ENST00000461377 SHC4Q6S5L8 630 aa23.32■■□□□ 1.32
CCM2-203ENST00000461377 FLAD1Q8NFF5 587 aa23.32■■□□□ 1.32
CCM2-203ENST00000461377 OXER1Q8TDS5 423 aa23.32■■□□□ 1.32
CCM2-203ENST00000461377 ANKS1AQ92625 1134 aa23.32■■□□□ 1.32
CCM2-203ENST00000461377 PHF20Q9BVI0 1012 aa23.32■■□□□ 1.32
CCM2-203ENST00000461377 V9GY48 417 aaPredicted RBP23.32■■□□□ 1.32
CCM2-203ENST00000461377 GAKO14976 1311 aa23.31■■□□□ 1.32
CCM2-203ENST00000461377 NPR1P16066 1061 aa23.31■■□□□ 1.32
CCM2-203ENST00000461377 TFAP4Q01664 338 aa23.31■■□□□ 1.32
CCM2-203ENST00000461377 RESP18Q5W5W9 173 aa23.31■■□□□ 1.32
CCM2-203ENST00000461377 DGKHQ86XP1 1220 aa23.31■■□□□ 1.32
CCM2-203ENST00000461377 TIGD1Q96MW7 591 aa23.31■■□□□ 1.32
CCM2-203ENST00000461377 PLCG2P16885 1265 aa23.31■■□□□ 1.32
CCM2-203ENST00000461377 MAPKAPK5Q8IW41 473 aa23.31■■□□□ 1.32
CCM2-203ENST00000461377 SLF2Q8IX21 1173 aa23.31■■□□□ 1.32
CCM2-203ENST00000461377 SRBD1Q8N5C6 995 aaKnown RBP23.31■■□□□ 1.32
CCM2-203ENST00000461377 IL17RBQ9NRM6 502 aa23.31■■□□□ 1.32
CCM2-203ENST00000461377 VPS54Q9P1Q0 977 aa23.31■■□□□ 1.32
CCM2-203ENST00000461377 KIAA1468Q9P260 1216 aa23.3■■□□□ 1.32
CCM2-203ENST00000461377 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.3■■□□□ 1.32
CCM2-203ENST00000461377 DDX60LQ5H9U9 1706 aaKnown RBP23.3■■□□□ 1.32
CCM2-203ENST00000461377 MYH6P13533 1939 aa23.29■■□□□ 1.32
CCM2-203ENST00000461377 CCDC178Q5BJE1 867 aa23.29■■□□□ 1.32
CCM2-203ENST00000461377 COA1Q9GZY4 146 aa23.29■■□□□ 1.32
CCM2-203ENST00000461377 TCP11L1Q9NUJ3 509 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms