RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 PDE4BQ07343 736 aa16.32■□□□□ 0.2
NCL-207ENST00000461347 CCDC42Q96M95 316 aa16.32■□□□□ 0.2
NCL-207ENST00000461347 PARD6BQ9BYG5 372 aa16.32■□□□□ 0.2
NCL-207ENST00000461347 BMP2KQ9NSY1 1161 aaPredicted RBP16.32■□□□□ 0.2
NCL-207ENST00000461347 KRT83P78385 493 aa16.31■□□□□ 0.2
NCL-207ENST00000461347 LONRF2Q1L5Z9 754 aa16.31■□□□□ 0.2
NCL-207ENST00000461347 CYP26C1Q6V0L0 522 aa16.31■□□□□ 0.2
NCL-207ENST00000461347 RBM43Q6ZSC3 357 aaKnown RBP16.31■□□□□ 0.2
NCL-207ENST00000461347 FCHSD1Q86WN1 690 aa16.31■□□□□ 0.2
NCL-207ENST00000461347 LPIN2Q92539 896 aa16.31■□□□□ 0.2
NCL-207ENST00000461347 GYS2P54840 703 aa16.31■□□□□ 0.2
NCL-207ENST00000461347 PAK1Q13153 545 aa16.31■□□□□ 0.2
NCL-207ENST00000461347 HEATR3Q7Z4Q2 680 aa16.31■□□□□ 0.2
NCL-207ENST00000461347 ENGASEQ8NFI3 743 aa16.31■□□□□ 0.2
NCL-207ENST00000461347 TAF4BQ92750 862 aa16.31■□□□□ 0.2
NCL-207ENST00000461347 ALS2CR12Q96Q35 445 aa16.31■□□□□ 0.2
NCL-207ENST00000461347 MMRN2Q9H8L6 949 aa16.31■□□□□ 0.2
NCL-207ENST00000461347 PDE11AQ9HCR9 933 aa16.31■□□□□ 0.2
NCL-207ENST00000461347 INCENPQ9NQS7 918 aa16.31■□□□□ 0.2
NCL-207ENST00000461347 WWC3Q9ULE0 1092 aa16.31■□□□□ 0.2
NCL-207ENST00000461347 PTPRUQ92729 1446 aa16.31■□□□□ 0.2
NCL-207ENST00000461347 SOWAHDA6NJG2 315 aa16.31■□□□□ 0.2
NCL-207ENST00000461347 BRD3Q15059 726 aa16.31■□□□□ 0.2
NCL-207ENST00000461347 EEF2KMTQ96G04 330 aa16.31■□□□□ 0.2
NCL-207ENST00000461347 CSRNP2Q9H175 543 aa16.31■□□□□ 0.2
NCL-207ENST00000461347 RABEP2Q9H5N1 569 aa16.31■□□□□ 0.2
NCL-207ENST00000461347 CYP27B1O15528 508 aa16.3■□□□□ 0.2
NCL-207ENST00000461347 CIAO1O76071 339 aa16.3■□□□□ 0.2
NCL-207ENST00000461347 CASP14P31944 242 aa16.3■□□□□ 0.2
NCL-207ENST00000461347 NYAP1Q6ZVC0 841 aa16.3■□□□□ 0.2
NCL-207ENST00000461347 FANCBQ8NB91 859 aa16.3■□□□□ 0.2
NCL-207ENST00000461347 ADAMTS13Q76LX8 1427 aa16.3■□□□□ 0.2
NCL-207ENST00000461347 RDXP35241 583 aaKnown RBP16.3■□□□□ 0.2
NCL-207ENST00000461347 PLCD1P51178 756 aa16.3■□□□□ 0.2
NCL-207ENST00000461347 HNRNPH2P55795 449 aaKnown RBP16.3■□□□□ 0.2
NCL-207ENST00000461347 TUBB4BP68371 445 aa16.3■□□□□ 0.2
NCL-207ENST00000461347 HLTFQ14527 1009 aaKnown RBP eCLIP16.3■□□□□ 0.24e-17■□□□□ 10
NCL-207ENST00000461347 FAM107BQ9H098 131 aa16.3■□□□□ 0.2
NCL-207ENST00000461347 SEC63Q9UGP8 760 aaKnown RBP16.3■□□□□ 0.2
NCL-207ENST00000461347 JAG2Q9Y219 1238 aa16.3■□□□□ 0.2
NCL-207ENST00000461347 SH2B2O14492 632 aaPredicted RBP16.3■□□□□ 0.2
NCL-207ENST00000461347 FDPSP14324 419 aaKnown RBP16.3■□□□□ 0.2
NCL-207ENST00000461347 WWC2Q6AWC2 1192 aa16.3■□□□□ 0.2
NCL-207ENST00000461347 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.3■□□□□ 0.22e-66■□□□□ 9
NCL-207ENST00000461347 ARHGAP23Q9P227 1491 aa16.3■□□□□ 0.2
NCL-207ENST00000461347 FOXN1O15353 648 aa16.29■□□□□ 0.2
NCL-207ENST00000461347 TBC1D8BQ0IIM8 1120 aa16.29■□□□□ 0.2
NCL-207ENST00000461347 IKQ13123 557 aaPredicted RBP16.29■□□□□ 0.2
NCL-207ENST00000461347 SLC35F6Q8N357 371 aa16.29■□□□□ 0.2
NCL-207ENST00000461347 NIP7Q9Y221 180 aaKnown RBP eCLIP16.29■□□□□ 0.29e-58■■□□□ 13.6
NCL-207ENST00000461347 EXOC5O00471 708 aa16.29■□□□□ 0.2
NCL-207ENST00000461347 PDE8AO60658 829 aa16.29■□□□□ 0.2
NCL-207ENST00000461347 TUBBP07437 444 aa16.29■□□□□ 0.2
NCL-207ENST00000461347 IBSPP21815 317 aaPredicted RBP16.29■□□□□ 0.2
NCL-207ENST00000461347 ADD2P35612 726 aa16.29■□□□□ 0.2
NCL-207ENST00000461347 SCARF1Q14162 830 aa16.29■□□□□ 0.2
NCL-207ENST00000461347 SPATA1Q5VX52 437 aa16.29■□□□□ 0.2
NCL-207ENST00000461347 DTHD1Q6ZMT9 781 aa16.29■□□□□ 0.2
NCL-207ENST00000461347 SDR42E1Q8WUS8 393 aa16.29■□□□□ 0.2
NCL-207ENST00000461347 CRNKL1Q9BZJ0 848 aaKnown RBP16.29■□□□□ 0.2
NCL-207ENST00000461347 ZSWIM5Q9P217 1185 aa16.29■□□□□ 0.2
NCL-207ENST00000461347 FAM114A1Q8IWE2 563 aa16.29■□□□□ 0.2
NCL-207ENST00000461347 MB21D2Q8IYB1 491 aaPredicted RBP16.29■□□□□ 0.2
NCL-207ENST00000461347 NAA15Q9BXJ9 866 aaKnown RBP16.29■□□□□ 0.2
NCL-207ENST00000461347 CDC23Q9UJX2 597 aa16.29■□□□□ 0.2
NCL-207ENST00000461347 PCDHB6Q9Y5E3 794 aa16.29■□□□□ 0.2
NCL-207ENST00000461347 TACC1O75410 805 aa16.28■□□□□ 0.2
NCL-207ENST00000461347 TOGARAM2Q6ZUX3 1019 aa16.28■□□□□ 0.2
NCL-207ENST00000461347 SRGAP1Q7Z6B7 1085 aa16.28■□□□□ 0.2
NCL-207ENST00000461347 TRIML1Q8N9V2 468 aa16.28■□□□□ 0.2
NCL-207ENST00000461347 CALML4Q96GE6 196 aa16.28■□□□□ 0.2
NCL-207ENST00000461347 RBL2Q08999 1139 aa16.28■□□□□ 0.2
NCL-207ENST00000461347 UBE3CQ15386 1083 aa16.28■□□□□ 0.2
NCL-207ENST00000461347 SHC4Q6S5L8 630 aa16.28■□□□□ 0.2
NCL-207ENST00000461347 TBC1D10CQ8IV04 446 aa16.28■□□□□ 0.2
NCL-207ENST00000461347 DHX37Q8IY37 1157 aaKnown RBP16.28■□□□□ 0.2
NCL-207ENST00000461347 ZBTB38Q8NAP3 1195 aaPredicted RBP16.28■□□□□ 0.2
NCL-207ENST00000461347 NELFBQ8WX92 580 aa16.28■□□□□ 0.2
NCL-207ENST00000461347 HINFPQ9BQA5 517 aa16.28■□□□□ 0.2
NCL-207ENST00000461347 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.28■□□□□ 0.27e-16■■■■□ 23.1
NCL-207ENST00000461347 ZNF652Q9Y2D9 606 aa16.28■□□□□ 0.2
NCL-207ENST00000461347 PCCAP05165 728 aaPredicted RBP16.28■□□□□ 0.2
NCL-207ENST00000461347 CALM1P0DP23 149 aa16.28■□□□□ 0.2
NCL-207ENST00000461347 CALM2P0DP24 149 aa16.28■□□□□ 0.2
NCL-207ENST00000461347 CALM3P0DP25 149 aa16.28■□□□□ 0.2
NCL-207ENST00000461347 RABL6Q3YEC7 729 aaPredicted RBP16.28■□□□□ 0.2
NCL-207ENST00000461347 CCDC40Q4G0X9 1142 aa16.28■□□□□ 0.2
NCL-207ENST00000461347 ATG9AQ7Z3C6 839 aa16.28■□□□□ 0.2
NCL-207ENST00000461347 PSMB7Q99436 277 aa16.28■□□□□ 0.2
NCL-207ENST00000461347 RIMS1Q86UR5 1692 aaKnown RBP16.28■□□□□ 0.2
NCL-207ENST00000461347 ANKARQ7Z5J8 1434 aa16.28■□□□□ 0.2
NCL-207ENST00000461347 ERCC3P19447 782 aa16.28■□□□□ 0.2
NCL-207ENST00000461347 CALML3P27482 149 aa16.28■□□□□ 0.2
NCL-207ENST00000461347 CTSWP56202 376 aa16.28■□□□□ 0.2
NCL-207ENST00000461347 AMPD3Q01432 767 aa16.28■□□□□ 0.2
NCL-207ENST00000461347 PDIA6Q15084 440 aa16.28■□□□□ 0.2
NCL-207ENST00000461347 ENOX1Q8TC92 643 aaKnown RBP16.28■□□□□ 0.2
NCL-207ENST00000461347 BPIFA3Q9BQP9 254 aa16.28■□□□□ 0.2
NCL-207ENST00000461347 NCAPD2Q15021 1401 aa16.27■□□□□ 0.2
NCL-207ENST00000461347 TNKSO95271 1327 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms