RNA–Protein interactions for RNA: ENST00000461063.6

SOX2-OT-202, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 566 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-202ENST00000461063 PANK1Q8TE04 598 aa10.75□□□□□ -0.69
SOX2-OT-202ENST00000461063 DNAJC18Q9H819 358 aa10.75□□□□□ -0.69
SOX2-OT-202ENST00000461063 PNMA3Q9UL41 463 aa10.75□□□□□ -0.69
SOX2-OT-202ENST00000461063 PALD1Q9ULE6 856 aa10.75□□□□□ -0.69
SOX2-OT-202ENST00000461063 ZBED9Q6R2W3 1325 aa10.75□□□□□ -0.69
SOX2-OT-202ENST00000461063 PHIPQ8WWQ0 1821 aa10.74□□□□□ -0.69
SOX2-OT-202ENST00000461063 MAP3K13O43283 966 aa10.74□□□□□ -0.69
SOX2-OT-202ENST00000461063 ADCY3O60266 1144 aa10.74□□□□□ -0.69
SOX2-OT-202ENST00000461063 ELNP15502 786 aa10.74□□□□□ -0.69
SOX2-OT-202ENST00000461063 CYP7A1P22680 504 aa10.74□□□□□ -0.69
SOX2-OT-202ENST00000461063 GJA8P48165 433 aa10.74□□□□□ -0.69
SOX2-OT-202ENST00000461063 UBXN2AP68543 259 aa10.74□□□□□ -0.69
SOX2-OT-202ENST00000461063 IRF5Q13568 498 aa10.74□□□□□ -0.69
SOX2-OT-202ENST00000461063 FAM110CQ1W6H9 321 aa10.74□□□□□ -0.69
SOX2-OT-202ENST00000461063 FOXP4Q8IVH2 680 aaPredicted RBP10.74□□□□□ -0.69
SOX2-OT-202ENST00000461063 NKX2-3Q8TAU0 364 aa10.74□□□□□ -0.69
SOX2-OT-202ENST00000461063 WDR18Q9BV38 432 aa10.74□□□□□ -0.69
SOX2-OT-202ENST00000461063 RNF208Q9H0X6 261 aa10.74□□□□□ -0.69
SOX2-OT-202ENST00000461063 ASCC2Q9H1I8 757 aaPredicted RBP10.74□□□□□ -0.69
SOX2-OT-202ENST00000461063 AS3MTQ9HBK9 375 aa10.74□□□□□ -0.69
SOX2-OT-202ENST00000461063 TRPC6Q9Y210 931 aa10.74□□□□□ -0.69
SOX2-OT-202ENST00000461063 EXOC6BQ9Y2D4 811 aa10.74□□□□□ -0.69
SOX2-OT-202ENST00000461063 MAST2Q6P0Q8 1798 aa10.73□□□□□ -0.69
SOX2-OT-202ENST00000461063 IDH1O75874 414 aaKnown RBP10.73□□□□□ -0.69
SOX2-OT-202ENST00000461063 ASNSP08243 561 aa10.73□□□□□ -0.69
SOX2-OT-202ENST00000461063 GCLCP48506 637 aaPredicted RBP10.73□□□□□ -0.69
SOX2-OT-202ENST00000461063 BACE1P56817 501 aa10.73□□□□□ -0.69
SOX2-OT-202ENST00000461063 PABPC4Q13310 644 aaKnown RBP eCLIP10.73□□□□□ -0.69
SOX2-OT-202ENST00000461063 MTMR2Q13614 643 aa10.73□□□□□ -0.69
SOX2-OT-202ENST00000461063 SHROOM1Q2M3G4 852 aaPredicted RBP10.73□□□□□ -0.69
SOX2-OT-202ENST00000461063 UBE2Q1Q7Z7E8 422 aa10.73□□□□□ -0.69
SOX2-OT-202ENST00000461063 ERC1Q8IUD2 1116 aa10.73□□□□□ -0.69
SOX2-OT-202ENST00000461063 CRACR2BQ8N4Y2 399 aaPredicted RBP10.73□□□□□ -0.69
SOX2-OT-202ENST00000461063 PXYLP1Q8TE99 480 aa10.73□□□□□ -0.69
SOX2-OT-202ENST00000461063 UNC93B1Q9H1C4 597 aa10.73□□□□□ -0.69
SOX2-OT-202ENST00000461063 PCDH10Q9P2E7 1040 aa10.73□□□□□ -0.69
SOX2-OT-202ENST00000461063 SAP30BPQ9UHR5 308 aaKnown RBP10.73□□□□□ -0.69
SOX2-OT-202ENST00000461063 METRNQ9UJH8 293 aa10.73□□□□□ -0.69
SOX2-OT-202ENST00000461063 NDUFB9Q9Y6M9 179 aa10.73□□□□□ -0.69
SOX2-OT-202ENST00000461063 PTPRFP10586 1907 aa10.72□□□□□ -0.69
SOX2-OT-202ENST00000461063 H0YGN5 161 aa10.72□□□□□ -0.69
SOX2-OT-202ENST00000461063 GDF11O95390 407 aa10.72□□□□□ -0.69
SOX2-OT-202ENST00000461063 INHAP05111 366 aa10.72□□□□□ -0.69
SOX2-OT-202ENST00000461063 AACSQ86V21 672 aa10.72□□□□□ -0.69
SOX2-OT-202ENST00000461063 MAGEB6Q8N7X4 407 aa10.72□□□□□ -0.69
SOX2-OT-202ENST00000461063 MIGA1Q8NAN2 632 aa10.72□□□□□ -0.69
SOX2-OT-202ENST00000461063 U2AF1L4Q8WU68 220 aaKnown RBP10.72□□□□□ -0.69
SOX2-OT-202ENST00000461063 COA7Q96BR5 231 aa10.72□□□□□ -0.69
SOX2-OT-202ENST00000461063 TRIM34Q9BYJ4 488 aa10.72□□□□□ -0.69
SOX2-OT-202ENST00000461063 ANTXR1Q9H6X2 564 aa10.72□□□□□ -0.69
SOX2-OT-202ENST00000461063 GINM1Q9NU53 330 aa10.72□□□□□ -0.69
SOX2-OT-202ENST00000461063 ZBTB21Q9ULJ3 1066 aa10.72□□□□□ -0.69
SOX2-OT-202ENST00000461063 RANBP2P49792 3224 aaKnown RBP10.72□□□□□ -0.69
SOX2-OT-202ENST00000461063 SIPA1L1O43166 1804 aa10.72□□□□□ -0.69
SOX2-OT-202ENST00000461063 LOC285556D6RIA3 1793 aa10.71□□□□□ -0.69
SOX2-OT-202ENST00000461063 SGPL1O95470 568 aa10.71□□□□□ -0.69
SOX2-OT-202ENST00000461063 HLA-DOAP06340 250 aa10.71□□□□□ -0.69
SOX2-OT-202ENST00000461063 HOXA7P31268 230 aaPredicted RBP10.71□□□□□ -0.69
SOX2-OT-202ENST00000461063 ATN1P54259 1190 aaPredicted RBP10.71□□□□□ -0.69
SOX2-OT-202ENST00000461063 MAP3K12Q12852 859 aa10.71□□□□□ -0.69
SOX2-OT-202ENST00000461063 CERS3Q8IU89 383 aa10.71□□□□□ -0.69
SOX2-OT-202ENST00000461063 P2RX7Q99572 595 aaKnown RBP10.71□□□□□ -0.69
SOX2-OT-202ENST00000461063 IL1RAPL2Q9NP60 686 aa10.71□□□□□ -0.69
SOX2-OT-202ENST00000461063 TMOD4Q9NZQ9 345 aa10.71□□□□□ -0.69
SOX2-OT-202ENST00000461063 MORF4L1Q9UBU8 362 aa10.71□□□□□ -0.69
SOX2-OT-202ENST00000461063 GJD2Q9UKL4 321 aa10.71□□□□□ -0.69
SOX2-OT-202ENST00000461063 TAOK2Q9UL54 1235 aa10.71□□□□□ -0.69
SOX2-OT-202ENST00000461063 COLQQ9Y215 455 aaPredicted RBP10.71□□□□□ -0.69
SOX2-OT-202ENST00000461063 C19orf81C9J6K1 198 aa10.7□□□□□ -0.7
SOX2-OT-202ENST00000461063 USP17L10C9JJH3 530 aa10.7□□□□□ -0.7
SOX2-OT-202ENST00000461063 MS4A1P11836 297 aa10.7□□□□□ -0.7
SOX2-OT-202ENST00000461063 USP5P45974 858 aa10.7□□□□□ -0.7
SOX2-OT-202ENST00000461063 NUBP1P53384 320 aa10.7□□□□□ -0.7
SOX2-OT-202ENST00000461063 IRX3P78415 501 aaPredicted RBP10.7□□□□□ -0.7
SOX2-OT-202ENST00000461063 HSP90AB4PQ58FF6 505 aa10.7□□□□□ -0.7
SOX2-OT-202ENST00000461063 TATDN1Q6P1N9 297 aa10.7□□□□□ -0.7
SOX2-OT-202ENST00000461063 TMED8Q6PL24 325 aaPredicted RBP10.7□□□□□ -0.7
SOX2-OT-202ENST00000461063 RHPN1Q8TCX5 695 aa10.7□□□□□ -0.7
SOX2-OT-202ENST00000461063 DPF3Q92784 378 aa10.7□□□□□ -0.7
SOX2-OT-202ENST00000461063 DEFB118Q96PH6 123 aa10.7□□□□□ -0.7
SOX2-OT-202ENST00000461063 PAK6Q9NQU5 681 aaPredicted RBP10.7□□□□□ -0.7
SOX2-OT-202ENST00000461063 EMILIN3Q9NT22 766 aa10.7□□□□□ -0.7
SOX2-OT-202ENST00000461063 CEP290O15078 2479 aa10.7□□□□□ -0.7
SOX2-OT-202ENST00000461063 PEX10O60683 326 aa10.69□□□□□ -0.7
SOX2-OT-202ENST00000461063 FARP2O94887 1054 aaPredicted RBP10.69□□□□□ -0.7
SOX2-OT-202ENST00000461063 GH2P01242 217 aa10.69□□□□□ -0.7
SOX2-OT-202ENST00000461063 TFRCP02786 760 aaKnown RBP10.69□□□□□ -0.7
SOX2-OT-202ENST00000461063 HERVK_113P62684 666 aa10.69□□□□□ -0.7
SOX2-OT-202ENST00000461063 SIRT2Q8IXJ6 389 aa10.69□□□□□ -0.7
SOX2-OT-202ENST00000461063 SLC39A7Q92504 469 aa10.69□□□□□ -0.7
SOX2-OT-202ENST00000461063 RIOK1Q9BRS2 568 aaKnown RBP10.69□□□□□ -0.7
SOX2-OT-202ENST00000461063 HTATIP2Q9BUP3 242 aa10.69□□□□□ -0.7
SOX2-OT-202ENST00000461063 EHD4Q9H223 541 aa10.69□□□□□ -0.7
SOX2-OT-202ENST00000461063 TXNRD2Q9NNW7 524 aa10.69□□□□□ -0.7
SOX2-OT-202ENST00000461063 BMP2KQ9NSY1 1161 aaPredicted RBP10.69□□□□□ -0.7
SOX2-OT-202ENST00000461063 ZBTB40Q9NUA8 1239 aa10.69□□□□□ -0.7
SOX2-OT-202ENST00000461063 RBPJLQ9UBG7 517 aa10.69□□□□□ -0.7
SOX2-OT-202ENST00000461063 SERPINB13Q9UIV8 391 aa10.69□□□□□ -0.7
SOX2-OT-202ENST00000461063 MGAMO43451 1857 aa10.69□□□□□ -0.7
SOX2-OT-202ENST00000461063 ATAD5Q96QE3 1844 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms