RNA–Protein interactions for RNA: ENST00000461018.5

CNN3-204, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-204ENST00000461018 TMEM164Q5U3C3 297 aa6.19□□□□□ -1.42
CNN3-204ENST00000461018 PBXIP1Q96AQ6 731 aa6.19□□□□□ -1.42
CNN3-204ENST00000461018 IFT43Q96FT9 208 aa6.19□□□□□ -1.42
CNN3-204ENST00000461018 USP20Q9Y2K6 914 aa6.19□□□□□ -1.42
CNN3-204ENST00000461018 FER1L6Q2WGJ9 1857 aa6.19□□□□□ -1.42
CNN3-204ENST00000461018 MAP3K19Q56UN5 1328 aa6.19□□□□□ -1.42
CNN3-204ENST00000461018 SBNO2Q9Y2G9 1366 aa6.18□□□□□ -1.42
CNN3-204ENST00000461018 SCN4AP35499 1836 aa6.18□□□□□ -1.42
CNN3-204ENST00000461018 AFDNP55196 1824 aaKnown RBP6.18□□□□□ -1.42
CNN3-204ENST00000461018 MKI67P46013 3256 aaKnown RBP6.18□□□□□ -1.42
CNN3-204ENST00000461018 M0R082 166 aa6.18□□□□□ -1.42
CNN3-204ENST00000461018 MICAL2O94851 1124 aa6.18□□□□□ -1.42
CNN3-204ENST00000461018 EPB42P16452 691 aa6.18□□□□□ -1.42
CNN3-204ENST00000461018 NFKB1P19838 968 aa6.18□□□□□ -1.42
CNN3-204ENST00000461018 CCINQ13939 588 aa6.18□□□□□ -1.42
CNN3-204ENST00000461018 LRP8Q14114 963 aa6.18□□□□□ -1.42
CNN3-204ENST00000461018 NAA30Q147X3 362 aaPredicted RBP6.18□□□□□ -1.42
CNN3-204ENST00000461018 SWI5Q1ZZU3 235 aa6.18□□□□□ -1.42
CNN3-204ENST00000461018 IER5Q5VY09 327 aa6.18□□□□□ -1.42
CNN3-204ENST00000461018 C8orf86Q6ZUL3 223 aa6.18□□□□□ -1.42
CNN3-204ENST00000461018 ZNF417Q8TAU3 575 aa6.18□□□□□ -1.42
CNN3-204ENST00000461018 ZNF587Q96SQ5 575 aaPredicted RBP6.18□□□□□ -1.42
CNN3-204ENST00000461018 GOLGA2P5Q9HBQ8 144 aa6.18□□□□□ -1.42
CNN3-204ENST00000461018 HACL1Q9UJ83 578 aa6.18□□□□□ -1.42
CNN3-204ENST00000461018 LRFN2Q9ULH4 789 aa6.18□□□□□ -1.42
CNN3-204ENST00000461018 RNF123Q5XPI4 1314 aa6.18□□□□□ -1.42
CNN3-204ENST00000461018 PITPNM2Q9BZ72 1349 aa6.18□□□□□ -1.42
CNN3-204ENST00000461018 KDRP35968 1356 aa6.18□□□□□ -1.42
CNN3-204ENST00000461018 CD163L1Q9NR16 1453 aa6.17□□□□□ -1.42
CNN3-204ENST00000461018 IQCA1LA6NCM1 817 aa6.17□□□□□ -1.42
CNN3-204ENST00000461018 ATG7O95352 703 aa6.17□□□□□ -1.42
CNN3-204ENST00000461018 ELOAQ14241 798 aaKnown RBP6.17□□□□□ -1.42
CNN3-204ENST00000461018 NFIXQ14938 502 aa6.17□□□□□ -1.42
CNN3-204ENST00000461018 COX20Q5RI15 118 aa6.17□□□□□ -1.42
CNN3-204ENST00000461018 OLFM4Q6UX06 510 aa6.17□□□□□ -1.42
CNN3-204ENST00000461018 DLK2Q6UY11 383 aa6.17□□□□□ -1.42
CNN3-204ENST00000461018 RGL4Q8IZJ4 473 aa6.17□□□□□ -1.42
CNN3-204ENST00000461018 CCDC82Q8N4S0 544 aa6.17□□□□□ -1.42
CNN3-204ENST00000461018 RAPGEF4Q8WZA2 1011 aa6.17□□□□□ -1.42
CNN3-204ENST00000461018 TNFRSF25Q93038 417 aa6.17□□□□□ -1.42
CNN3-204ENST00000461018 ZNF622Q969S3 477 aaKnown RBP eCLIP6.17□□□□□ -1.42
CNN3-204ENST00000461018 GSX2Q9BZM3 304 aa6.17□□□□□ -1.42
CNN3-204ENST00000461018 DMGDHQ9UI17 866 aaKnown RBP6.17□□□□□ -1.42
CNN3-204ENST00000461018 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.17□□□□□ -1.42
CNN3-204ENST00000461018 PCDH11XQ9BZA7 1347 aa6.17□□□□□ -1.42
CNN3-204ENST00000461018 PCDH11YQ9BZA8 1340 aa6.17□□□□□ -1.42
CNN3-204ENST00000461018 USP42Q9H9J4 1324 aaKnown RBP6.17□□□□□ -1.42
CNN3-204ENST00000461018 MON2Q7Z3U7 1717 aa6.16□□□□□ -1.42
CNN3-204ENST00000461018 DLEC1Q9Y238 1755 aa6.16□□□□□ -1.42
CNN3-204ENST00000461018 SLX4Q8IY92 1834 aa6.16□□□□□ -1.42
CNN3-204ENST00000461018 CACNA1SQ13698 1873 aa6.16□□□□□ -1.42
CNN3-204ENST00000461018 ADARB2-AS1A8MUL3 147 aa6.16□□□□□ -1.42
CNN3-204ENST00000461018 CA12O43570 354 aa6.16□□□□□ -1.42
CNN3-204ENST00000461018 SASH3O75995 380 aa6.16□□□□□ -1.42
CNN3-204ENST00000461018 H2AFB1P0C5Y9 115 aa6.16□□□□□ -1.42
CNN3-204ENST00000461018 H2AFB2P0C5Z0 115 aa6.16□□□□□ -1.42
CNN3-204ENST00000461018 HMGB2P26583 209 aaKnown RBP6.16□□□□□ -1.42
CNN3-204ENST00000461018 INPP5BP32019 993 aa6.16□□□□□ -1.42
CNN3-204ENST00000461018 AMPHP49418 695 aa6.16□□□□□ -1.42
CNN3-204ENST00000461018 ARSDP51689 593 aa6.16□□□□□ -1.42
CNN3-204ENST00000461018 TRIM28Q13263 835 aaKnown RBP6.16□□□□□ -1.42
CNN3-204ENST00000461018 RRS1Q15050 365 aaKnown RBP6.16□□□□□ -1.42
CNN3-204ENST00000461018 OCLNQ16625 522 aa6.16□□□□□ -1.42
CNN3-204ENST00000461018 USPL1Q5W0Q7 1092 aa6.16□□□□□ -1.42
CNN3-204ENST00000461018 CAPN12Q6ZSI9 719 aa6.16□□□□□ -1.42
CNN3-204ENST00000461018 SAPCD2Q86UD0 394 aa6.16□□□□□ -1.42
CNN3-204ENST00000461018 TREML1Q86YW5 311 aa6.16□□□□□ -1.42
CNN3-204ENST00000461018 KRTAP19-1Q8IUB9 90 aa6.16□□□□□ -1.42
CNN3-204ENST00000461018 CMTR1Q8N1G2 835 aaKnown RBP6.16□□□□□ -1.42
CNN3-204ENST00000461018 SYNE4Q8N205 404 aa6.16□□□□□ -1.42
CNN3-204ENST00000461018 NUDT8Q8WV74 236 aa6.16□□□□□ -1.42
CNN3-204ENST00000461018 SAP130Q9H0E3 1048 aa6.16□□□□□ -1.42
CNN3-204ENST00000461018 TMOD3Q9NYL9 352 aa6.16□□□□□ -1.42
CNN3-204ENST00000461018 COL6A3P12111 3177 aa6.16□□□□□ -1.42
CNN3-204ENST00000461018 TRPM7Q96QT4 1865 aa6.15□□□□□ -1.42
CNN3-204ENST00000461018 TRPA1O75762 1119 aa6.15□□□□□ -1.42
CNN3-204ENST00000461018 ALBP02768 609 aa6.15□□□□□ -1.42
CNN3-204ENST00000461018 SERPINB2P05120 415 aa6.15□□□□□ -1.42
CNN3-204ENST00000461018 TARSP26639 723 aaKnown RBP6.15□□□□□ -1.42
CNN3-204ENST00000461018 EPS15P42566 896 aa6.15□□□□□ -1.42
CNN3-204ENST00000461018 CRKLP46109 303 aaKnown RBP6.15□□□□□ -1.42
CNN3-204ENST00000461018 MYO19Q96H55 970 aa6.15□□□□□ -1.42
CNN3-204ENST00000461018 TAOK3Q9H2K8 898 aa6.15□□□□□ -1.42
CNN3-204ENST00000461018 ZNF277Q9NRM2 450 aaPredicted RBP6.15□□□□□ -1.42
CNN3-204ENST00000461018 RNF186Q9NXI6 227 aa6.15□□□□□ -1.42
CNN3-204ENST00000461018 DNAJB12Q9NXW2 375 aaKnown RBP6.15□□□□□ -1.42
CNN3-204ENST00000461018 STARD13Q9Y3M8 1113 aa6.15□□□□□ -1.42
CNN3-204ENST00000461018 COL5A3P25940 1745 aaPredicted RBP6.15□□□□□ -1.42
CNN3-204ENST00000461018 CNTNAP4Q9C0A0 1308 aa6.15□□□□□ -1.43
CNN3-204ENST00000461018 CEP290O15078 2479 aa6.14□□□□□ -1.43
CNN3-204ENST00000461018 ANKRD31Q8N7Z5 1873 aa6.14□□□□□ -1.43
CNN3-204ENST00000461018 H0YIN7 160 aa6.14□□□□□ -1.43
CNN3-204ENST00000461018 FAM229AH3BQW9 127 aa6.14□□□□□ -1.43
CNN3-204ENST00000461018 OPLAHO14841 1288 aa6.14□□□□□ -1.43
CNN3-204ENST00000461018 CELF2O95319 508 aaKnown RBP6.14□□□□□ -1.43
CNN3-204ENST00000461018 RARAP10276 462 aa6.14□□□□□ -1.43
CNN3-204ENST00000461018 GRNP28799 593 aaKnown RBP6.14□□□□□ -1.43
CNN3-204ENST00000461018 HSP90AB2PQ58FF8 381 aa6.14□□□□□ -1.43
CNN3-204ENST00000461018 C16orf46Q6P387 395 aa6.14□□□□□ -1.43
CNN3-204ENST00000461018 INTS5Q6P9B9 1019 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms