RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 CTNND2Q9UQB3 1225 aa5.05□□□□□ -1.6
SYPL1-203ENST00000460770 SLITRK5O94991 958 aa5.04□□□□□ -1.6
SYPL1-203ENST00000460770 GLI1P08151 1106 aa5.04□□□□□ -1.6
SYPL1-203ENST00000460770 ETV3P41162 512 aa5.04□□□□□ -1.6
SYPL1-203ENST00000460770 PDE4BQ07343 736 aa5.04□□□□□ -1.6
SYPL1-203ENST00000460770 CCDC85BQ15834 202 aaPredicted RBP5.04□□□□□ -1.6
SYPL1-203ENST00000460770 LETMD1Q6P1Q0 360 aa5.04□□□□□ -1.6
SYPL1-203ENST00000460770 KIRREL1Q96J84 757 aa5.04□□□□□ -1.6
SYPL1-203ENST00000460770 HSPA12BQ96MM6 686 aa5.04□□□□□ -1.6
SYPL1-203ENST00000460770 TOX2Q96NM4 488 aa5.04□□□□□ -1.6
SYPL1-203ENST00000460770 CARS2Q9HA77 564 aaKnown RBP5.04□□□□□ -1.6
SYPL1-203ENST00000460770 PRDM7Q9NQW5 492 aa5.04□□□□□ -1.6
SYPL1-203ENST00000460770 PRPF40AO75400 957 aaKnown RBP5.03□□□□□ -1.6
SYPL1-203ENST00000460770 CST3P01034 146 aaPredicted RBP5.03□□□□□ -1.6
SYPL1-203ENST00000460770 ITGAEP38570 1179 aa5.03□□□□□ -1.6
SYPL1-203ENST00000460770 GDNFP39905 211 aa5.03□□□□□ -1.6
SYPL1-203ENST00000460770 RAP1GAPP47736 663 aa5.03□□□□□ -1.6
SYPL1-203ENST00000460770 SLBPQ14493 270 aaKnown RBP eCLIP5.03□□□□□ -1.6
SYPL1-203ENST00000460770 INPP5AQ14642 412 aa5.03□□□□□ -1.6
SYPL1-203ENST00000460770 ZNF124Q15973 351 aa5.03□□□□□ -1.6
SYPL1-203ENST00000460770 MLANAQ16655 118 aa5.03□□□□□ -1.6
SYPL1-203ENST00000460770 CDKAL1Q5VV42 579 aa5.03□□□□□ -1.6
SYPL1-203ENST00000460770 MIR1-1HGQ9H1L0 117 aa5.03□□□□□ -1.6
SYPL1-203ENST00000460770 H3BS24 57 aa5.02□□□□□ -1.61
SYPL1-203ENST00000460770 P4HBP07237 508 aaKnown RBP5.02□□□□□ -1.61
SYPL1-203ENST00000460770 LCE1DQ5T752 114 aa5.02□□□□□ -1.61
SYPL1-203ENST00000460770 TMPRSS7Q7RTY8 843 aa5.02□□□□□ -1.61
SYPL1-203ENST00000460770 UBE3DQ7Z6J8 389 aa5.02□□□□□ -1.61
SYPL1-203ENST00000460770 ZSCAN18Q8TBC5 510 aaPredicted RBP5.02□□□□□ -1.61
SYPL1-203ENST00000460770 PIWIL2Q8TC59 973 aaKnown RBP5.02□□□□□ -1.61
SYPL1-203ENST00000460770 SYTL4Q96C24 671 aaPredicted RBP5.02□□□□□ -1.61
SYPL1-203ENST00000460770 ATP13A1Q9HD20 1204 aa5.02□□□□□ -1.61
SYPL1-203ENST00000460770 WWC3Q9ULE0 1092 aa5.02□□□□□ -1.61
SYPL1-203ENST00000460770 CAPN6Q9Y6Q1 641 aa5.02□□□□□ -1.61
SYPL1-203ENST00000460770 TSPAN15O95858 294 aa5.01□□□□□ -1.61
SYPL1-203ENST00000460770 CBX7O95931 251 aa5.01□□□□□ -1.61
SYPL1-203ENST00000460770 GRK4P32298 578 aa5.01□□□□□ -1.61
SYPL1-203ENST00000460770 TSNAXIP1Q2TAA8 658 aa5.01□□□□□ -1.61
SYPL1-203ENST00000460770 RASIP1Q5U651 963 aa5.01□□□□□ -1.61
SYPL1-203ENST00000460770 PRAMEF13Q5VWM6 474 aa5.01□□□□□ -1.61
SYPL1-203ENST00000460770 SLC6A19Q695T7 634 aa5.01□□□□□ -1.61
SYPL1-203ENST00000460770 GAL3ST3Q96A11 431 aa5.01□□□□□ -1.61
SYPL1-203ENST00000460770 ALPK1Q96QP1 1244 aa5.01□□□□□ -1.61
SYPL1-203ENST00000460770 SETDB2Q96T68 719 aa5.01□□□□□ -1.61
SYPL1-203ENST00000460770 TRIT1Q9H3H1 467 aaKnown RBP5.01□□□□□ -1.61
SYPL1-203ENST00000460770 FBRSQ9HAH7 460 aa5.01□□□□□ -1.61
SYPL1-203ENST00000460770 SEMA3GQ9NS98 782 aa5.01□□□□□ -1.61
SYPL1-203ENST00000460770 ZNF503-AS2A6NEH8 195 aa5□□□□□ -1.61
SYPL1-203ENST00000460770 NFIBO00712 420 aa5□□□□□ -1.61
SYPL1-203ENST00000460770 MESP2Q0VG99 397 aa5□□□□□ -1.61
SYPL1-203ENST00000460770 AGMOQ6ZNB7 445 aa5□□□□□ -1.61
SYPL1-203ENST00000460770 ANKLE2Q86XL3 938 aa5□□□□□ -1.61
SYPL1-203ENST00000460770 MRPL41Q8IXM3 137 aaKnown RBP5□□□□□ -1.61
SYPL1-203ENST00000460770 UBE2FQ969M7 185 aa5□□□□□ -1.61
SYPL1-203ENST00000460770 ADAM30Q9UKF2 790 aa5□□□□□ -1.61
SYPL1-203ENST00000460770 ST14Q9Y5Y6 855 aa5□□□□□ -1.61
SYPL1-203ENST00000460770 AK5Q9Y6K8 562 aa5□□□□□ -1.61
SYPL1-203ENST00000460770 PGRP06401 933 aa4.99□□□□□ -1.61
SYPL1-203ENST00000460770 PTPN11Q06124 597 aaPredicted RBP4.99□□□□□ -1.61
SYPL1-203ENST00000460770 NKG7Q16617 165 aa4.99□□□□□ -1.61
SYPL1-203ENST00000460770 EAPPQ56P03 285 aaPredicted RBP4.99□□□□□ -1.61
SYPL1-203ENST00000460770 FBXO15Q8NCQ5 510 aaPredicted RBP4.99□□□□□ -1.61
SYPL1-203ENST00000460770 LIN37Q96GY3 246 aaPredicted RBP4.99□□□□□ -1.61
SYPL1-203ENST00000460770 GPATCH2Q9NW75 528 aa4.99□□□□□ -1.61
SYPL1-203ENST00000460770 SLAMF8Q9P0V8 285 aa4.99□□□□□ -1.61
SYPL1-203ENST00000460770 ZSWIM5Q9P217 1185 aa4.99□□□□□ -1.61
SYPL1-203ENST00000460770 KCNH3Q9ULD8 1083 aa4.99□□□□□ -1.61
SYPL1-203ENST00000460770 PRR33A8MZF0 331 aa4.98□□□□□ -1.61
SYPL1-203ENST00000460770 GFRA2O00451 464 aa4.98□□□□□ -1.61
SYPL1-203ENST00000460770 BPNT1O95861 308 aa4.98□□□□□ -1.61
SYPL1-203ENST00000460770 LIG3P49916 1009 aa4.98□□□□□ -1.61
SYPL1-203ENST00000460770 YARSP54577 528 aaKnown RBP4.98□□□□□ -1.61
SYPL1-203ENST00000460770 FBLN7Q53RD9 439 aa4.98□□□□□ -1.61
SYPL1-203ENST00000460770 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.98□□□□□ -1.61
SYPL1-203ENST00000460770 SYDE1Q6ZW31 735 aaPredicted RBP4.98□□□□□ -1.61
SYPL1-203ENST00000460770 TTC6Q86TZ1 520 aa4.98□□□□□ -1.61
SYPL1-203ENST00000460770 ABHD4Q8TB40 342 aa4.98□□□□□ -1.61
SYPL1-203ENST00000460770 XAGE3Q8WTP9 111 aa4.98□□□□□ -1.61
SYPL1-203ENST00000460770 TMEM87BQ96K49 555 aa4.98□□□□□ -1.61
SYPL1-203ENST00000460770 NOC4LQ9BVI4 516 aaKnown RBP4.98□□□□□ -1.61
SYPL1-203ENST00000460770 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.98□□□□□ -1.61
SYPL1-203ENST00000460770 TMEM253P0C7T8 217 aa4.97□□□□□ -1.61
SYPL1-203ENST00000460770 ST13P50502 369 aaKnown RBP4.97□□□□□ -1.61
SYPL1-203ENST00000460770 RPL6Q02878 288 aaKnown RBP4.97□□□□□ -1.61
SYPL1-203ENST00000460770 TNK2Q07912 1038 aa4.97□□□□□ -1.61
SYPL1-203ENST00000460770 SEPT6Q14141 434 aa4.97□□□□□ -1.61
SYPL1-203ENST00000460770 FYB2Q5VWT5 728 aa4.97□□□□□ -1.61
SYPL1-203ENST00000460770 CCDC84Q86UT8 332 aaPredicted RBP4.97□□□□□ -1.61
SYPL1-203ENST00000460770 MCATQ8IVS2 390 aaKnown RBP4.97□□□□□ -1.61
SYPL1-203ENST00000460770 MYLIPQ8WY64 445 aa4.97□□□□□ -1.61
SYPL1-203ENST00000460770 DUSP9Q99956 384 aaKnown RBP4.97□□□□□ -1.61
SYPL1-203ENST00000460770 TRAIPQ9BWF2 469 aa4.97□□□□□ -1.61
SYPL1-203ENST00000460770 EPB41L4BQ9H329 900 aa4.97□□□□□ -1.61
SYPL1-203ENST00000460770 TMEM59LQ9UK28 342 aa4.97□□□□□ -1.61
SYPL1-203ENST00000460770 CHMP4BP1P59074 171 aa4.96□□□□□ -1.62
SYPL1-203ENST00000460770 PSMD2Q13200 908 aa4.96□□□□□ -1.62
SYPL1-203ENST00000460770 TAF1CQ15572 869 aaPredicted RBP4.96□□□□□ -1.62
SYPL1-203ENST00000460770 MAP3K11Q16584 847 aa4.96□□□□□ -1.62
SYPL1-203ENST00000460770 PRR23BQ6ZRT6 265 aa4.96□□□□□ -1.62
SYPL1-203ENST00000460770 CDH24Q86UP0 819 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms