RNA–Protein interactions for RNA: ENST00000460480.1

SLC6A1-203, Transcript of solute carrier family 6 member 1, humanhuman

TSL 4

Gene SLC6A1, Length 457 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-203ENST00000460480 DPF3Q92784 378 aa17.97■□□□□ 0.47
SLC6A1-203ENST00000460480 P2RX7Q99572 595 aaKnown RBP17.97■□□□□ 0.47
SLC6A1-203ENST00000460480 AS3MTQ9HBK9 375 aa17.97■□□□□ 0.47
SLC6A1-203ENST00000460480 ATAD5Q96QE3 1844 aa17.97■□□□□ 0.47
SLC6A1-203ENST00000460480 CDK5RAP2Q96SN8 1893 aa17.97■□□□□ 0.47
SLC6A1-203ENST00000460480 C19orf81C9J6K1 198 aa17.96■□□□□ 0.47
SLC6A1-203ENST00000460480 CYP7A1P22680 504 aa17.96■□□□□ 0.47
SLC6A1-203ENST00000460480 MTMR2Q13614 643 aa17.96■□□□□ 0.47
SLC6A1-203ENST00000460480 ITPRIPQ8IWB1 547 aa17.96■□□□□ 0.47
SLC6A1-203ENST00000460480 DEFB118Q96PH6 123 aa17.96■□□□□ 0.47
SLC6A1-203ENST00000460480 ANTXR1Q9H6X2 564 aa17.96■□□□□ 0.47
SLC6A1-203ENST00000460480 RBPJLQ9UBG7 517 aa17.96■□□□□ 0.47
SLC6A1-203ENST00000460480 FOCADQ5VW36 1801 aa17.95■□□□□ 0.46
SLC6A1-203ENST00000460480 USP17L10C9JJH3 530 aa17.95■□□□□ 0.46
SLC6A1-203ENST00000460480 PEX10O60683 326 aa17.95■□□□□ 0.46
SLC6A1-203ENST00000460480 TATDN1Q6P1N9 297 aa17.95■□□□□ 0.46
SLC6A1-203ENST00000460480 FTSJ3Q8IY81 847 aaKnown RBP17.95■□□□□ 0.46
SLC6A1-203ENST00000460480 HTATIP2Q9BUP3 242 aa17.95■□□□□ 0.46
SLC6A1-203ENST00000460480 TXNRD2Q9NNW7 524 aa17.95■□□□□ 0.46
SLC6A1-203ENST00000460480 EMILIN3Q9NT22 766 aa17.95■□□□□ 0.46
SLC6A1-203ENST00000460480 SAP30BPQ9UHR5 308 aaKnown RBP17.95■□□□□ 0.46
SLC6A1-203ENST00000460480 ZBTB21Q9ULJ3 1066 aa17.95■□□□□ 0.46
SLC6A1-203ENST00000460480 NDUFB9Q9Y6M9 179 aa17.95■□□□□ 0.46
SLC6A1-203ENST00000460480 FARP2O94887 1054 aaPredicted RBP17.94■□□□□ 0.46
SLC6A1-203ENST00000460480 GDF11O95390 407 aa17.94■□□□□ 0.46
SLC6A1-203ENST00000460480 TFRCP02786 760 aaKnown RBP17.94■□□□□ 0.46
SLC6A1-203ENST00000460480 Q3C1V9 767 aa17.94■□□□□ 0.46
SLC6A1-203ENST00000460480 TMED8Q6PL24 325 aaPredicted RBP17.94■□□□□ 0.46
SLC6A1-203ENST00000460480 HERVK_113P62684 666 aa17.93■□□□□ 0.46
SLC6A1-203ENST00000460480 CHRDL2Q6WN34 429 aa17.93■□□□□ 0.46
SLC6A1-203ENST00000460480 CRACR2BQ8N4Y2 399 aaPredicted RBP17.93■□□□□ 0.46
SLC6A1-203ENST00000460480 MIGA1Q8NAN2 632 aa17.93■□□□□ 0.46
SLC6A1-203ENST00000460480 PANK1Q8TE04 598 aa17.93■□□□□ 0.46
SLC6A1-203ENST00000460480 USP6NLQ92738 828 aa17.93■□□□□ 0.46
SLC6A1-203ENST00000460480 RBM27Q9P2N5 1060 aaKnown RBP17.93■□□□□ 0.46
SLC6A1-203ENST00000460480 EXOC6BQ9Y2D4 811 aa17.93■□□□□ 0.46
SLC6A1-203ENST00000460480 MAST2Q6P0Q8 1798 aa17.93■□□□□ 0.46
SLC6A1-203ENST00000460480 PLXNB2O15031 1838 aa17.93■□□□□ 0.46
SLC6A1-203ENST00000460480 IDH1O75874 414 aaKnown RBP17.92■□□□□ 0.46
SLC6A1-203ENST00000460480 MNX1P50219 401 aaPredicted RBP17.92■□□□□ 0.46
SLC6A1-203ENST00000460480 TRIM32Q13049 653 aa17.92■□□□□ 0.46
SLC6A1-203ENST00000460480 CERS3Q8IU89 383 aa17.92■□□□□ 0.46
SLC6A1-203ENST00000460480 MAGEB6Q8N7X4 407 aa17.92■□□□□ 0.46
SLC6A1-203ENST00000460480 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.92■□□□□ 0.46
SLC6A1-203ENST00000460480 TMOD4Q9NZQ9 345 aa17.92■□□□□ 0.46
SLC6A1-203ENST00000460480 LAMA3Q16787 3333 aa17.92■□□□□ 0.46
SLC6A1-203ENST00000460480 GH2P01242 217 aa17.91■□□□□ 0.46
SLC6A1-203ENST00000460480 HMGCRP04035 888 aa17.91■□□□□ 0.46
SLC6A1-203ENST00000460480 HLA-DOAP06340 250 aa17.91■□□□□ 0.46
SLC6A1-203ENST00000460480 XRCC5P13010 732 aaKnown RBP17.91■□□□□ 0.46
SLC6A1-203ENST00000460480 IRX3P78415 501 aaPredicted RBP17.91■□□□□ 0.46
SLC6A1-203ENST00000460480 MAP3K21Q5TCX8 1036 aa17.91■□□□□ 0.46
SLC6A1-203ENST00000460480 SIRT2Q8IXJ6 389 aa17.91■□□□□ 0.46
SLC6A1-203ENST00000460480 GPRC5AQ8NFJ5 357 aa17.91■□□□□ 0.46
SLC6A1-203ENST00000460480 C12orf42Q96LP6 360 aa17.91■□□□□ 0.46
SLC6A1-203ENST00000460480 RIOK1Q9BRS2 568 aaKnown RBP17.91■□□□□ 0.46
SLC6A1-203ENST00000460480 EHD4Q9H223 541 aa17.91■□□□□ 0.46
SLC6A1-203ENST00000460480 RPTORQ8N122 1335 aa17.91■□□□□ 0.46
SLC6A1-203ENST00000460480 A0A0C4DFX4 3053 aa17.9■□□□□ 0.46
SLC6A1-203ENST00000460480 PLCD1P51178 756 aa17.9■□□□□ 0.46
SLC6A1-203ENST00000460480 MAP3K12Q12852 859 aa17.9■□□□□ 0.46
SLC6A1-203ENST00000460480 USP17L2Q6R6M4 530 aa17.9■□□□□ 0.46
SLC6A1-203ENST00000460480 AACSQ86V21 672 aa17.9■□□□□ 0.46
SLC6A1-203ENST00000460480 ERC1Q8IUD2 1116 aa17.9■□□□□ 0.46
SLC6A1-203ENST00000460480 TRIB2Q92519 343 aa17.9■□□□□ 0.46
SLC6A1-203ENST00000460480 PAWRQ96IZ0 340 aaKnown RBP17.9■□□□□ 0.46
SLC6A1-203ENST00000460480 SERPINB13Q9UIV8 391 aa17.9■□□□□ 0.46
SLC6A1-203ENST00000460480 TAOK2Q9UL54 1235 aa17.9■□□□□ 0.46
SLC6A1-203ENST00000460480 NR2E3Q9Y5X4 410 aa17.9■□□□□ 0.46
SLC6A1-203ENST00000460480 GUCY1A2P33402 732 aa17.89■□□□□ 0.45
SLC6A1-203ENST00000460480 GABPAQ06546 454 aa17.89■□□□□ 0.45
SLC6A1-203ENST00000460480 ANKLE1Q8NAG6 615 aa17.89■□□□□ 0.45
SLC6A1-203ENST00000460480 RHPN1Q8TCX5 695 aa17.89■□□□□ 0.45
SLC6A1-203ENST00000460480 DIS3LQ8TF46 1054 aaKnown RBP17.89■□□□□ 0.45
SLC6A1-203ENST00000460480 PORCNQ9H237 461 aa17.89■□□□□ 0.45
SLC6A1-203ENST00000460480 ZBED9Q6R2W3 1325 aa17.89■□□□□ 0.45
SLC6A1-203ENST00000460480 SHMT1P34896 483 aa17.88■□□□□ 0.45
SLC6A1-203ENST00000460480 USP5P45974 858 aa17.88■□□□□ 0.45
SLC6A1-203ENST00000460480 ERVK-9P63128 1117 aa17.88■□□□□ 0.45
SLC6A1-203ENST00000460480 ERVK-24P63145 666 aa17.88■□□□□ 0.45
SLC6A1-203ENST00000460480 MORN1Q5T089 497 aa17.88■□□□□ 0.45
SLC6A1-203ENST00000460480 TTC6Q86TZ1 520 aa17.88■□□□□ 0.45
SLC6A1-203ENST00000460480 TRIM34Q9BYJ4 488 aa17.88■□□□□ 0.45
SLC6A1-203ENST00000460480 KIAA1683Q9H0B3 1180 aa17.88■□□□□ 0.45
SLC6A1-203ENST00000460480 HMX1Q9NP08 348 aaPredicted RBP17.88■□□□□ 0.45
SLC6A1-203ENST00000460480 IL1RAPL2Q9NP60 686 aa17.88■□□□□ 0.45
SLC6A1-203ENST00000460480 ZBTB40Q9NUA8 1239 aa17.88■□□□□ 0.45
SLC6A1-203ENST00000460480 OGDHLQ9ULD0 1010 aa17.88■□□□□ 0.45
SLC6A1-203ENST00000460480 MYH1P12882 1939 aa17.88■□□□□ 0.45
SLC6A1-203ENST00000460480 LAMA2P24043 3122 aaKnown RBP17.87■□□□□ 0.45
SLC6A1-203ENST00000460480 COL6A3P12111 3177 aa17.87■□□□□ 0.45
SLC6A1-203ENST00000460480 TCRBV5S4A2TA0A5A2 114 aa17.87■□□□□ 0.45
SLC6A1-203ENST00000460480 CNMDO75829 334 aa17.87■□□□□ 0.45
SLC6A1-203ENST00000460480 CYP2B6P20813 491 aa17.87■□□□□ 0.45
SLC6A1-203ENST00000460480 MAPK4P31152 587 aa17.87■□□□□ 0.45
SLC6A1-203ENST00000460480 CERKLQ49MI3 558 aaPredicted RBP17.87■□□□□ 0.45
SLC6A1-203ENST00000460480 HSP90AB4PQ58FF6 505 aa17.87■□□□□ 0.45
SLC6A1-203ENST00000460480 CATSPERGQ6ZRH7 1159 aa17.87■□□□□ 0.45
SLC6A1-203ENST00000460480 NECAB2Q7Z6G3 386 aa17.87■□□□□ 0.45
SLC6A1-203ENST00000460480 ACER1Q8TDN7 264 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms