RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 APPBP2Q92624 585 aa17.97■□□□□ 0.47
ATG4B-213ENST00000460211 FSD1Q9BTV5 496 aa17.97■□□□□ 0.47
ATG4B-213ENST00000460211 AFG3L2Q9Y4W6 797 aa17.97■□□□□ 0.47
ATG4B-213ENST00000460211 NUCB1Q02818 461 aa17.96■□□□□ 0.47
ATG4B-213ENST00000460211 SLFNL1Q499Z3 407 aa17.96■□□□□ 0.47
ATG4B-213ENST00000460211 NBPF11Q86T75 865 aa17.96■□□□□ 0.47
ATG4B-213ENST00000460211 SDR42E1Q8WUS8 393 aa17.96■□□□□ 0.47
ATG4B-213ENST00000460211 ARHGAP39Q9C0H5 1083 aa17.96■□□□□ 0.47
ATG4B-213ENST00000460211 AS3MTQ9HBK9 375 aa17.96■□□□□ 0.47
ATG4B-213ENST00000460211 DCP1AQ9NPI6 582 aaPredicted RBP17.96■□□□□ 0.47
ATG4B-213ENST00000460211 TAOK2Q9UL54 1235 aa17.96■□□□□ 0.47
ATG4B-213ENST00000460211 SLC4A4Q9Y6R1 1079 aa17.96■□□□□ 0.47
ATG4B-213ENST00000460211 SALL3Q9BXA9 1300 aa17.96■□□□□ 0.46
ATG4B-213ENST00000460211 USP17L5A8MUK1 530 aa17.95■□□□□ 0.46
ATG4B-213ENST00000460211 BTBD19C9JJ37 291 aa17.95■□□□□ 0.46
ATG4B-213ENST00000460211 FXR1P51114 621 aaKnown RBP eCLIP17.95■□□□□ 0.46
ATG4B-213ENST00000460211 ARHGEF6Q15052 776 aa17.95■□□□□ 0.46
ATG4B-213ENST00000460211 ANKRD23Q86SG2 305 aa17.95■□□□□ 0.46
ATG4B-213ENST00000460211 SH3TC2Q8TF17 1288 aa17.95■□□□□ 0.46
ATG4B-213ENST00000460211 EVI5LQ96CN4 794 aa17.95■□□□□ 0.46
ATG4B-213ENST00000460211 PUS7LQ9H0K6 701 aaKnown RBP17.95■□□□□ 0.46
ATG4B-213ENST00000460211 TRIM75PA6NK02 468 aa17.94■□□□□ 0.46
ATG4B-213ENST00000460211 GNAT2P19087 354 aa17.94■□□□□ 0.46
ATG4B-213ENST00000460211 ZNF280CQ8ND82 737 aa17.94■□□□□ 0.46
ATG4B-213ENST00000460211 DNAJC18Q9H819 358 aa17.94■□□□□ 0.46
ATG4B-213ENST00000460211 COLQQ9Y215 455 aaPredicted RBP17.94■□□□□ 0.46
ATG4B-213ENST00000460211 A0A0G2JLL6 359 aaPredicted RBP17.93■□□□□ 0.46
ATG4B-213ENST00000460211 PDHXO00330 501 aa17.93■□□□□ 0.46
ATG4B-213ENST00000460211 PRKAB2O43741 272 aa17.93■□□□□ 0.46
ATG4B-213ENST00000460211 CHGBP05060 677 aa17.93■□□□□ 0.46
ATG4B-213ENST00000460211 PLCD1P51178 756 aa17.93■□□□□ 0.46
ATG4B-213ENST00000460211 SPP2Q13103 211 aa17.93■□□□□ 0.46
ATG4B-213ENST00000460211 CERKLQ49MI3 558 aaPredicted RBP17.93■□□□□ 0.46
ATG4B-213ENST00000460211 TATDN1Q6P1N9 297 aa17.93■□□□□ 0.46
ATG4B-213ENST00000460211 PRRT2Q7Z6L0 340 aaPredicted RBP17.93■□□□□ 0.46
ATG4B-213ENST00000460211 OSBP2Q969R2 916 aa17.93■□□□□ 0.46
ATG4B-213ENST00000460211 STRBPQ96SI9 672 aaKnown RBP17.93■□□□□ 0.46
ATG4B-213ENST00000460211 CABP5Q9NP86 173 aa17.93■□□□□ 0.46
ATG4B-213ENST00000460211 GDF11O95390 407 aa17.92■□□□□ 0.46
ATG4B-213ENST00000460211 RRP1BQ14684 758 aaKnown RBP17.92■□□□□ 0.46
ATG4B-213ENST00000460211 KIF22Q14807 665 aa17.92■□□□□ 0.46
ATG4B-213ENST00000460211 GADL1Q6ZQY3 521 aa17.92■□□□□ 0.46
ATG4B-213ENST00000460211 TICAM2Q86XR7 235 aa17.92■□□□□ 0.46
ATG4B-213ENST00000460211 WDR18Q9BV38 432 aa17.92■□□□□ 0.46
ATG4B-213ENST00000460211 SWAP70Q9UH65 585 aa17.92■□□□□ 0.46
ATG4B-213ENST00000460211 TLR2O60603 784 aa17.91■□□□□ 0.46
ATG4B-213ENST00000460211 GIMAP6Q6P9H5 292 aa17.91■□□□□ 0.46
ATG4B-213ENST00000460211 CCDC84Q86UT8 332 aaPredicted RBP17.91■□□□□ 0.46
ATG4B-213ENST00000460211 PARK7Q99497 189 aaKnown RBP17.91■□□□□ 0.46
ATG4B-213ENST00000460211 ZBTB21Q9ULJ3 1066 aa17.91■□□□□ 0.46
ATG4B-213ENST00000460211 FOCADQ5VW36 1801 aa17.91■□□□□ 0.46
ATG4B-213ENST00000460211 TRIM6-TRIM34B2RNG4 842 aa17.9■□□□□ 0.46
ATG4B-213ENST00000460211 USP17L12C9JPN9 530 aa17.9■□□□□ 0.46
ATG4B-213ENST00000460211 USP17L21D6R901 530 aa17.9■□□□□ 0.46
ATG4B-213ENST00000460211 GPAA1O43292 621 aa17.9■□□□□ 0.46
ATG4B-213ENST00000460211 GH2P01242 217 aa17.9■□□□□ 0.46
ATG4B-213ENST00000460211 APPP05067 770 aa17.9■□□□□ 0.46
ATG4B-213ENST00000460211 LACTBP83111 547 aaPredicted RBP17.9■□□□□ 0.46
ATG4B-213ENST00000460211 GABPAQ06546 454 aa17.9■□□□□ 0.46
ATG4B-213ENST00000460211 ABCB5Q2M3G0 1257 aa17.9■□□□□ 0.46
ATG4B-213ENST00000460211 NACAP1Q9BZK3 213 aa17.9■□□□□ 0.46
ATG4B-213ENST00000460211 OSBPL3Q9H4L5 887 aa17.9■□□□□ 0.46
ATG4B-213ENST00000460211 TMOD4Q9NZQ9 345 aa17.9■□□□□ 0.46
ATG4B-213ENST00000460211 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.9■□□□□ 0.46
ATG4B-213ENST00000460211 ARPP21Q9UBL0 812 aaPredicted RBP17.9■□□□□ 0.46
ATG4B-213ENST00000460211 SLC45A1Q9Y2W3 748 aa17.9■□□□□ 0.46
ATG4B-213ENST00000460211 C19orf81C9J6K1 198 aa17.89■□□□□ 0.45
ATG4B-213ENST00000460211 H0YGN5 161 aa17.89■□□□□ 0.45
ATG4B-213ENST00000460211 PABPC4Q13310 644 aaKnown RBP eCLIP17.89■□□□□ 0.45
ATG4B-213ENST00000460211 MOGSQ13724 837 aa17.89■□□□□ 0.45
ATG4B-213ENST00000460211 C12orf60Q5U649 245 aa17.89■□□□□ 0.45
ATG4B-213ENST00000460211 PLEKHM2Q8IWE5 1019 aa17.89■□□□□ 0.45
ATG4B-213ENST00000460211 PROCA1Q8NCQ7 364 aaPredicted RBP17.89■□□□□ 0.45
ATG4B-213ENST00000460211 PNMA3Q9UL41 463 aa17.89■□□□□ 0.45
ATG4B-213ENST00000460211 AGTPBP1Q9UPW5 1226 aa17.89■□□□□ 0.45
ATG4B-213ENST00000460211 MYH1P12882 1939 aa17.89■□□□□ 0.45
ATG4B-213ENST00000460211 DOCK1Q14185 1865 aa17.88■□□□□ 0.45
ATG4B-213ENST00000460211 CDK5RAP2Q96SN8 1893 aa17.88■□□□□ 0.45
ATG4B-213ENST00000460211 GSG1L2A8MUP6 293 aa17.88■□□□□ 0.45
ATG4B-213ENST00000460211 PATL2C9JE40 543 aaKnown RBP17.88■□□□□ 0.45
ATG4B-213ENST00000460211 USP17L10C9JJH3 530 aa17.88■□□□□ 0.45
ATG4B-213ENST00000460211 CYP2D6P10635 497 aa17.88■□□□□ 0.45
ATG4B-213ENST00000460211 SHMT1P34896 483 aa17.88■□□□□ 0.45
ATG4B-213ENST00000460211 TDO2P48775 406 aa17.88■□□□□ 0.45
ATG4B-213ENST00000460211 BACE1P56817 501 aa17.88■□□□□ 0.45
ATG4B-213ENST00000460211 RAB3GAP1Q15042 981 aa17.88■□□□□ 0.45
ATG4B-213ENST00000460211 ZMYM1Q5SVZ6 1142 aa17.88■□□□□ 0.45
ATG4B-213ENST00000460211 GPAT2Q6NUI2 795 aa17.88■□□□□ 0.45
ATG4B-213ENST00000460211 CTR9Q6PD62 1173 aa17.88■□□□□ 0.45
ATG4B-213ENST00000460211 RILPL2Q969X0 211 aa17.88■□□□□ 0.45
ATG4B-213ENST00000460211 CPA4Q9UI42 421 aa17.88■□□□□ 0.45
ATG4B-213ENST00000460211 CEP290O15078 2479 aa17.87■□□□□ 0.45
ATG4B-213ENST00000460211 M0R2C6 588 aa17.87■□□□□ 0.45
ATG4B-213ENST00000460211 MPHOSPH10O00566 681 aaKnown RBP17.87■□□□□ 0.45
ATG4B-213ENST00000460211 HMGCS2P54868 508 aa17.87■□□□□ 0.45
ATG4B-213ENST00000460211 MTFR1Q15390 333 aa17.87■□□□□ 0.45
ATG4B-213ENST00000460211 SBK1Q52WX2 424 aa17.87■□□□□ 0.45
ATG4B-213ENST00000460211 SH3D19Q5HYK7 790 aa17.87■□□□□ 0.45
ATG4B-213ENST00000460211 CCDC17Q96LX7 622 aa17.87■□□□□ 0.45
ATG4B-213ENST00000460211 MYH7P12883 1935 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms