RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 MKL1Q969V6 931 aa12.05□□□□□ -0.48
HERC4-207ENST00000460168 ZKSCAN3Q9BRR0 538 aa12.05□□□□□ -0.48
HERC4-207ENST00000460168 UBAC1Q9BSL1 405 aa12.05□□□□□ -0.48
HERC4-207ENST00000460168 USP17L3A6NCW0 530 aa12.04□□□□□ -0.48
HERC4-207ENST00000460168 USP17L4A6NCW7 530 aa12.04□□□□□ -0.48
HERC4-207ENST00000460168 GOLGA6L22H0YM25 854 aa12.04□□□□□ -0.48
HERC4-207ENST00000460168 DHX16O60231 1041 aaKnown RBP12.04□□□□□ -0.48
HERC4-207ENST00000460168 RANBP6O60518 1105 aaKnown RBP12.04□□□□□ -0.48
HERC4-207ENST00000460168 PRDM1O75626 825 aa12.04□□□□□ -0.48
HERC4-207ENST00000460168 PDCP20941 246 aa12.04□□□□□ -0.48
HERC4-207ENST00000460168 PDE4BQ07343 736 aa12.04□□□□□ -0.48
HERC4-207ENST00000460168 LARP1BQ659C4 914 aaKnown RBP12.04□□□□□ -0.48
HERC4-207ENST00000460168 USP17L1Q7RTZ2 530 aa12.04□□□□□ -0.48
HERC4-207ENST00000460168 KIAA0825Q8IV33 1275 aa12.04□□□□□ -0.48
HERC4-207ENST00000460168 MAPKAPK5Q8IW41 473 aa12.04□□□□□ -0.48
HERC4-207ENST00000460168 IGDCC4Q8TDY8 1250 aa12.04□□□□□ -0.48
HERC4-207ENST00000460168 ITFG2Q969R8 447 aa12.04□□□□□ -0.48
HERC4-207ENST00000460168 TEKT1Q969V4 418 aa12.04□□□□□ -0.48
HERC4-207ENST00000460168 LLPHQ9BRT6 129 aaKnown RBP12.04□□□□□ -0.48
HERC4-207ENST00000460168 MKRN1Q9UHC7 482 aaKnown RBP12.04□□□□□ -0.48
HERC4-207ENST00000460168 SCN9AQ15858 1988 aa12.04□□□□□ -0.48
HERC4-207ENST00000460168 NAV1Q8NEY1 1877 aa12.04□□□□□ -0.48
HERC4-207ENST00000460168 CCDC69A6NI79 296 aa12.03□□□□□ -0.48
HERC4-207ENST00000460168 NRDCO43847 1150 aa12.03□□□□□ -0.48
HERC4-207ENST00000460168 JAK2O60674 1132 aa12.03□□□□□ -0.48
HERC4-207ENST00000460168 BAG4O95429 457 aaKnown RBP12.03□□□□□ -0.48
HERC4-207ENST00000460168 POLR3DP05423 398 aaPredicted RBP12.03□□□□□ -0.48
HERC4-207ENST00000460168 CYP2D6P10635 497 aa12.03□□□□□ -0.48
HERC4-207ENST00000460168 SETDB1Q15047 1291 aa12.03□□□□□ -0.48
HERC4-207ENST00000460168 DALRD3Q5D0E6 543 aaKnown RBP12.03□□□□□ -0.48
HERC4-207ENST00000460168 RAB11FIP4Q86YS3 637 aa12.03□□□□□ -0.48
HERC4-207ENST00000460168 LARGE2Q8N3Y3 721 aa12.03□□□□□ -0.48
HERC4-207ENST00000460168 LY9Q9HBG7 655 aa12.03□□□□□ -0.48
HERC4-207ENST00000460168 ZBTB12Q9Y330 459 aaPredicted RBP12.03□□□□□ -0.48
HERC4-207ENST00000460168 KIF3AQ9Y496 699 aa12.03□□□□□ -0.48
HERC4-207ENST00000460168 VPS37CA5D8V6 355 aaPredicted RBP12.03□□□□□ -0.48
HERC4-207ENST00000460168 CPLX1O14810 134 aa12.03□□□□□ -0.48
HERC4-207ENST00000460168 LIFRP42702 1097 aa12.03□□□□□ -0.48
HERC4-207ENST00000460168 RHBDL3P58872 404 aa12.03□□□□□ -0.48
HERC4-207ENST00000460168 EVX2Q03828 476 aa12.03□□□□□ -0.48
HERC4-207ENST00000460168 WTAPQ15007 396 aa12.03□□□□□ -0.48
HERC4-207ENST00000460168 DACT2Q5SW24 774 aa12.03□□□□□ -0.48
HERC4-207ENST00000460168 APOA5Q6Q788 366 aa12.03□□□□□ -0.48
HERC4-207ENST00000460168 CLEC17AQ6ZS10 378 aa12.03□□□□□ -0.48
HERC4-207ENST00000460168 MICU3Q86XE3 530 aa12.03□□□□□ -0.48
HERC4-207ENST00000460168 IQCA1Q86XH1 822 aa12.03□□□□□ -0.48
HERC4-207ENST00000460168 FAM184AQ8NB25 1140 aa12.03□□□□□ -0.48
HERC4-207ENST00000460168 DDX11Q96FC9 970 aa12.03□□□□□ -0.48
HERC4-207ENST00000460168 ZNF277Q9NRM2 450 aaPredicted RBP12.03□□□□□ -0.48
HERC4-207ENST00000460168 SAP30BPQ9UHR5 308 aaKnown RBP12.03□□□□□ -0.48
HERC4-207ENST00000460168 FLT1P17948 1338 aa12.03□□□□□ -0.48
HERC4-207ENST00000460168 CDK5RAP2Q96SN8 1893 aa12.03□□□□□ -0.48
HERC4-207ENST00000460168 PTPDC1A2A3K4 754 aa12.02□□□□□ -0.48
HERC4-207ENST00000460168 FGRP09769 529 aa12.02□□□□□ -0.48
HERC4-207ENST00000460168 ZSCAN22P10073 491 aaPredicted RBP12.02□□□□□ -0.48
HERC4-207ENST00000460168 METAP2P50579 478 aaKnown RBP eCLIP12.02□□□□□ -0.48
HERC4-207ENST00000460168 FKBP1AP62942 108 aaKnown RBP12.02□□□□□ -0.48
HERC4-207ENST00000460168 HMGN5P82970 282 aaKnown RBP12.02□□□□□ -0.48
HERC4-207ENST00000460168 C12orf60Q5U649 245 aa12.02□□□□□ -0.48
HERC4-207ENST00000460168 SYNE3Q6ZMZ3 975 aa12.02□□□□□ -0.48
HERC4-207ENST00000460168 SGMS1Q86VZ5 419 aa12.02□□□□□ -0.48
HERC4-207ENST00000460168 NSUN7Q8NE18 718 aaKnown RBP12.02□□□□□ -0.48
HERC4-207ENST00000460168 MTA3Q9BTC8 594 aa12.02□□□□□ -0.48
HERC4-207ENST00000460168 SENP2Q9HC62 589 aa12.02□□□□□ -0.48
HERC4-207ENST00000460168 DONSONQ9NYP3 566 aa12.02□□□□□ -0.48
HERC4-207ENST00000460168 SLC12A7Q9Y666 1083 aa12.02□□□□□ -0.48
HERC4-207ENST00000460168 MRVI1Q9Y6F6 885 aa12.02□□□□□ -0.48
HERC4-207ENST00000460168 UQCRHLA0A096LP55 91 aa12.02□□□□□ -0.49
HERC4-207ENST00000460168 ZBTB43O43298 467 aa12.02□□□□□ -0.49
HERC4-207ENST00000460168 UQCRHP07919 91 aa12.02□□□□□ -0.49
HERC4-207ENST00000460168 MRE11P49959 708 aa12.02□□□□□ -0.49
HERC4-207ENST00000460168 RBM5P52756 815 aaKnown RBP eCLIP12.02□□□□□ -0.49
HERC4-207ENST00000460168 PICALMQ13492 652 aa12.02□□□□□ -0.49
HERC4-207ENST00000460168 MCTP1Q6DN14 999 aa12.02□□□□□ -0.49
HERC4-207ENST00000460168 HHIPL2Q6UWX4 724 aa12.02□□□□□ -0.49
HERC4-207ENST00000460168 TSPAN18Q96SJ8 248 aa12.02□□□□□ -0.49
HERC4-207ENST00000460168 SGIP1Q9BQI5 828 aa12.02□□□□□ -0.49
HERC4-207ENST00000460168 ISY1Q9ULR0 285 aaKnown RBP12.02□□□□□ -0.49
HERC4-207ENST00000460168 HPS5Q9UPZ3 1129 aa12.02□□□□□ -0.49
HERC4-207ENST00000460168 TNKSO95271 1327 aa12.02□□□□□ -0.49
HERC4-207ENST00000460168 YDJCA8MPS7 323 aa12.01□□□□□ -0.49
HERC4-207ENST00000460168 KIF1CO43896 1103 aaKnown RBP12.01□□□□□ -0.49
HERC4-207ENST00000460168 ORC4O43929 436 aa12.01□□□□□ -0.49
HERC4-207ENST00000460168 PPFIA3O75145 1194 aa12.01□□□□□ -0.49
HERC4-207ENST00000460168 RXRAP19793 462 aa12.01□□□□□ -0.49
HERC4-207ENST00000460168 CRKP46108 304 aa12.01□□□□□ -0.49
HERC4-207ENST00000460168 FOXD4L6Q3SYB3 417 aaPredicted RBP12.01□□□□□ -0.49
HERC4-207ENST00000460168 FOXD4L3Q6VB84 417 aaPredicted RBP12.01□□□□□ -0.49
HERC4-207ENST00000460168 SMARCC2Q8TAQ2 1214 aa12.01□□□□□ -0.49
HERC4-207ENST00000460168 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.01□□□□□ -0.49
HERC4-207ENST00000460168 CD2APQ9Y5K6 639 aa12.01□□□□□ -0.49
HERC4-207ENST00000460168 UTRNP46939 3433 aa12.01□□□□□ -0.49
HERC4-207ENST00000460168 TSPY2A6NKD2 308 aa12.01□□□□□ -0.49
HERC4-207ENST00000460168 CTDNEP1O95476 244 aa12.01□□□□□ -0.49
HERC4-207ENST00000460168 PLCD1P51178 756 aa12.01□□□□□ -0.49
HERC4-207ENST00000460168 DNAJC14Q6Y2X3 702 aaPredicted RBP12.01□□□□□ -0.49
HERC4-207ENST00000460168 ARMCX6Q7L4S7 300 aa12.01□□□□□ -0.49
HERC4-207ENST00000460168 CCDC144CPQ8IYA2 1237 aa12.01□□□□□ -0.49
HERC4-207ENST00000460168 ZSCAN10Q96SZ4 725 aaPredicted RBP12.01□□□□□ -0.49
HERC4-207ENST00000460168 MYL10Q9BUA6 226 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms