RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 NCBP1Q09161 790 aaKnown RBP20.83■□□□□ 0.93
HPS3-202ENST00000460120 RIOK1Q9BRS2 568 aaKnown RBP20.83■□□□□ 0.93
HPS3-202ENST00000460120 FBXO2Q9UK22 296 aaPredicted RBP20.83■□□□□ 0.93
HPS3-202ENST00000460120 MYH14Q7Z406 1995 aaKnown RBP20.83■□□□□ 0.92
HPS3-202ENST00000460120 CYP2D6P10635 497 aa20.83■□□□□ 0.92
HPS3-202ENST00000460120 GSDMDP57764 484 aa20.83■□□□□ 0.92
HPS3-202ENST00000460120 TIGD1Q96MW7 591 aa20.83■□□□□ 0.92
HPS3-202ENST00000460120 ZSCAN10Q96SZ4 725 aaPredicted RBP20.83■□□□□ 0.92
HPS3-202ENST00000460120 CSRNP2Q9H175 543 aa20.83■□□□□ 0.92
HPS3-202ENST00000460120 CCDC196A0A1B0GTZ2 297 aa20.82■□□□□ 0.92
HPS3-202ENST00000460120 WNT7AO00755 349 aa20.82■□□□□ 0.92
HPS3-202ENST00000460120 AFMP43652 599 aa20.82■□□□□ 0.92
HPS3-202ENST00000460120 E4F1Q66K89 784 aaPredicted RBP20.82■□□□□ 0.92
HPS3-202ENST00000460120 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.82■□□□□ 0.92
HPS3-202ENST00000460120 DHX58Q96C10 678 aa20.81■□□□□ 0.92
HPS3-202ENST00000460120 OSBPL5Q9H0X9 879 aaPredicted RBP20.81■□□□□ 0.92
HPS3-202ENST00000460120 PRDX5P30044 214 aa20.81■□□□□ 0.92
HPS3-202ENST00000460120 POSTNQ15063 836 aa20.81■□□□□ 0.92
HPS3-202ENST00000460120 SEC23AQ15436 765 aa20.81■□□□□ 0.92
HPS3-202ENST00000460120 CCDC94Q9BW85 323 aaPredicted RBP20.81■□□□□ 0.92
HPS3-202ENST00000460120 CDCA7Q9BWT1 371 aaPredicted RBP20.81■□□□□ 0.92
HPS3-202ENST00000460120 ECM29Q5VYK3 1845 aa20.8■□□□□ 0.92
HPS3-202ENST00000460120 CTIFO43310 598 aaKnown RBP20.8■□□□□ 0.92
HPS3-202ENST00000460120 RILPL1Q5EBL4 403 aa20.8■□□□□ 0.92
HPS3-202ENST00000460120 STAMQ92783 540 aa20.8■□□□□ 0.92
HPS3-202ENST00000460120 EPSTI1Q96J88 318 aa20.8■□□□□ 0.92
HPS3-202ENST00000460120 MAN1B1Q9UKM7 699 aa20.8■□□□□ 0.92
HPS3-202ENST00000460120 PAXBP1Q9Y5B6 917 aa20.8■□□□□ 0.92
HPS3-202ENST00000460120 COBLO75128 1261 aa20.8■□□□□ 0.92
HPS3-202ENST00000460120 FMR1Q06787 632 aaKnown RBP eCLIP20.8■□□□□ 0.922e-10■■■■■ 37.1
HPS3-202ENST00000460120 ZNF174Q15697 407 aa20.8■□□□□ 0.92
HPS3-202ENST00000460120 CTR9Q6PD62 1173 aa20.8■□□□□ 0.92
HPS3-202ENST00000460120 CATIPQ7Z7H3 387 aa20.8■□□□□ 0.92
HPS3-202ENST00000460120 TMTC2Q8N394 836 aa20.8■□□□□ 0.92
HPS3-202ENST00000460120 FOXP1Q9H334 677 aaPredicted RBP20.8■□□□□ 0.92
HPS3-202ENST00000460120 MECOMQ03112 1051 aa20.79■□□□□ 0.92
HPS3-202ENST00000460120 KLHL10Q6JEL2 608 aa20.79■□□□□ 0.92
HPS3-202ENST00000460120 NYAP1Q6ZVC0 841 aa20.79■□□□□ 0.92
HPS3-202ENST00000460120 BSDC1Q9NW68 430 aaPredicted RBP20.79■□□□□ 0.92
HPS3-202ENST00000460120 IMPACTQ9P2X3 320 aa20.79■□□□□ 0.92
HPS3-202ENST00000460120 CDK11BP21127 795 aaKnown RBP20.79■□□□□ 0.92
HPS3-202ENST00000460120 PTPREP23469 700 aa20.79■□□□□ 0.92
HPS3-202ENST00000460120 SYT10Q6XYQ8 523 aa20.79■□□□□ 0.92
HPS3-202ENST00000460120 NBPF5PQ86XG9 351 aaPredicted RBP20.79■□□□□ 0.92
HPS3-202ENST00000460120 FAM177A1Q8N128 213 aaPredicted RBP20.79■□□□□ 0.92
HPS3-202ENST00000460120 TMX1Q9H3N1 280 aa20.79■□□□□ 0.92
HPS3-202ENST00000460120 ZNF215Q9UL58 517 aaPredicted RBP20.79■□□□□ 0.92
HPS3-202ENST00000460120 ZNF804BA4D1E1 1349 aa20.79■□□□□ 0.92
HPS3-202ENST00000460120 SPATA31A5Q5VU36 1347 aa20.79■□□□□ 0.92
HPS3-202ENST00000460120 SPATA31A7Q8IWB4 1347 aa20.79■□□□□ 0.92
HPS3-202ENST00000460120 IKBKBO14920 756 aa20.78■□□□□ 0.92
HPS3-202ENST00000460120 TXNRD3Q86VQ6 643 aa20.78■□□□□ 0.92
HPS3-202ENST00000460120 PPP1R13BQ96KQ4 1090 aa20.78■□□□□ 0.92
HPS3-202ENST00000460120 UBE4AQ14139 1066 aa20.78■□□□□ 0.92
HPS3-202ENST00000460120 PKN1Q16512 942 aa20.78■□□□□ 0.92
HPS3-202ENST00000460120 IQCA1Q86XH1 822 aa20.78■□□□□ 0.92
HPS3-202ENST00000460120 HOMER1Q86YM7 354 aa20.78■□□□□ 0.92
HPS3-202ENST00000460120 CCDC150Q8NCX0 1101 aa20.78■□□□□ 0.92
HPS3-202ENST00000460120 CICQ96RK0 1608 aaPredicted RBP20.78■□□□□ 0.92
HPS3-202ENST00000460120 VEGFAP15692 232 aaPredicted RBP20.77■□□□□ 0.92
HPS3-202ENST00000460120 STX17P56962 302 aa20.77■□□□□ 0.92
HPS3-202ENST00000460120 SMARCE1Q969G3 411 aa20.77■□□□□ 0.92
HPS3-202ENST00000460120 C8orf37Q96NL8 207 aa20.77■□□□□ 0.92
HPS3-202ENST00000460120 THRAP3Q9Y2W1 955 aaKnown RBP20.77■□□□□ 0.92
HPS3-202ENST00000460120 NFE2L3Q9Y4A8 694 aa20.77■□□□□ 0.92
HPS3-202ENST00000460120 BCL9LQ86UU0 1499 aa20.77■□□□□ 0.92
HPS3-202ENST00000460120 A0A087X0B3 334 aa20.77■□□□□ 0.91
HPS3-202ENST00000460120 GNPATO15228 680 aa20.77■□□□□ 0.91
HPS3-202ENST00000460120 TOP1P11387 765 aaKnown RBP20.77■□□□□ 0.91
HPS3-202ENST00000460120 MDM2Q00987 491 aaPredicted RBP20.77■□□□□ 0.91
HPS3-202ENST00000460120 SMYD4Q8IYR2 804 aaPredicted RBP20.77■□□□□ 0.91
HPS3-202ENST00000460120 ANKRD7Q92527 254 aa20.77■□□□□ 0.91
HPS3-202ENST00000460120 SMARCC1Q92922 1105 aaPredicted RBP20.77■□□□□ 0.91
HPS3-202ENST00000460120 GPR101Q96P66 508 aaPredicted RBP20.77■□□□□ 0.91
HPS3-202ENST00000460120 RTL9Q8NET4 1388 aa20.76■□□□□ 0.91
HPS3-202ENST00000460120 ARAP2Q8WZ64 1704 aa20.76■□□□□ 0.91
HPS3-202ENST00000460120 ADAMTS3O15072 1205 aa20.76■□□□□ 0.91
HPS3-202ENST00000460120 KRT2P35908 639 aa20.76■□□□□ 0.91
HPS3-202ENST00000460120 RPS8P62241 208 aaKnown RBP20.76■□□□□ 0.91
HPS3-202ENST00000460120 CHD4Q14839 1912 aa20.76■□□□□ 0.91
HPS3-202ENST00000460120 TRIM75PA6NK02 468 aa20.76■□□□□ 0.91
HPS3-202ENST00000460120 AMIGO3Q86WK7 504 aa20.76■□□□□ 0.91
HPS3-202ENST00000460120 KIF18AQ8NI77 898 aa20.76■□□□□ 0.91
HPS3-202ENST00000460120 NSUN4Q96CB9 384 aaKnown RBP20.76■□□□□ 0.91
HPS3-202ENST00000460120 SETDB2Q96T68 719 aa20.76■□□□□ 0.91
HPS3-202ENST00000460120 BAZ2BQ9UIF8 2168 aaKnown RBP20.75■□□□□ 0.91
HPS3-202ENST00000460120 SF3B3Q15393 1217 aaKnown RBP20.75■□□□□ 0.91
HPS3-202ENST00000460120 RNF26Q9BY78 433 aaPredicted RBP20.75■□□□□ 0.91
HPS3-202ENST00000460120 SAMSN1Q9NSI8 373 aaKnown RBP20.75■□□□□ 0.91
HPS3-202ENST00000460120 HOOK1Q9UJC3 728 aaKnown RBP20.75■□□□□ 0.91
HPS3-202ENST00000460120 DOCK2Q92608 1830 aa20.75■□□□□ 0.91
HPS3-202ENST00000460120 PHLPP1O60346 1717 aa20.75■□□□□ 0.91
HPS3-202ENST00000460120 FAM237AA0A1B0GTK4 181 aa20.75■□□□□ 0.91
HPS3-202ENST00000460120 VWA3AA6NCI4 1184 aa20.75■□□□□ 0.91
HPS3-202ENST00000460120 XBP1P17861 261 aa20.75■□□□□ 0.91
HPS3-202ENST00000460120 HIBADHP31937 336 aaKnown RBP20.75■□□□□ 0.91
HPS3-202ENST00000460120 NLRP3Q96P20 1036 aa20.75■□□□□ 0.91
HPS3-202ENST00000460120 INTS13Q9NVM9 706 aa20.75■□□□□ 0.91
HPS3-202ENST00000460120 SRPRBQ9Y5M8 271 aaKnown RBP20.75■□□□□ 0.91
HPS3-202ENST00000460120 BAZ2AQ9UIF9 1905 aaKnown RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms