RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 ANKLE1Q8NAG6 615 aa15.12■□□□□ 0.01
GPNMB-204ENST00000459927 GPRC5AQ8NFJ5 357 aa15.12■□□□□ 0.01
GPNMB-204ENST00000459927 DNAJC18Q9H819 358 aa15.12■□□□□ 0.01
GPNMB-204ENST00000459927 TMOD4Q9NZQ9 345 aa15.12■□□□□ 0.01
GPNMB-204ENST00000459927 NOP58Q9Y2X3 529 aaKnown RBP15.12■□□□□ 0.01
GPNMB-204ENST00000459927 CYP2B6P20813 491 aa15.11■□□□□ 0.01
GPNMB-204ENST00000459927 ZAP70P43403 619 aa15.11■□□□□ 0.01
GPNMB-204ENST00000459927 MTMR2Q13614 643 aa15.11■□□□□ 0.01
GPNMB-204ENST00000459927 DIS3LQ8TF46 1054 aaKnown RBP15.11■□□□□ 0.01
GPNMB-204ENST00000459927 TXNRD2Q9NNW7 524 aa15.11■□□□□ 0.01
GPNMB-204ENST00000459927 PIH1D3Q9NQM4 214 aaKnown RBP15.11■□□□□ 0.01
GPNMB-204ENST00000459927 A0A1W2PPC1 479 aa15.1■□□□□ 0.01
GPNMB-204ENST00000459927 XRCC5P13010 732 aaKnown RBP15.1■□□□□ 0.01
GPNMB-204ENST00000459927 MNX1P50219 401 aaPredicted RBP15.1■□□□□ 0.01
GPNMB-204ENST00000459927 HERVK_113P62684 666 aa15.1■□□□□ 0.01
GPNMB-204ENST00000459927 DYNLL1P63167 89 aaKnown RBP15.1■□□□□ 0.01
GPNMB-204ENST00000459927 IRX3P78415 501 aaPredicted RBP15.1■□□□□ 0.01
GPNMB-204ENST00000459927 OS9Q13438 667 aaPredicted RBP15.1■□□□□ 0.01
GPNMB-204ENST00000459927 SHROOM1Q2M3G4 852 aaPredicted RBP15.1■□□□□ 0.01
GPNMB-204ENST00000459927 POTEEQ6S8J3 1075 aa15.1■□□□□ 0.01
GPNMB-204ENST00000459927 CRACR2BQ8N4Y2 399 aaPredicted RBP15.1■□□□□ 0.01
GPNMB-204ENST00000459927 NUDT12Q9BQG2 462 aa15.1■□□□□ 0.01
GPNMB-204ENST00000459927 CCDC8Q9H0W5 538 aaPredicted RBP15.1■□□□□ 0.01
GPNMB-204ENST00000459927 EMILIN3Q9NT22 766 aa15.1■□□□□ 0.01
GPNMB-204ENST00000459927 RANBP2P49792 3224 aaKnown RBP15.1■□□□□ 0.01
GPNMB-204ENST00000459927 CYP7A1P22680 504 aa15.09■□□□□ 0.01
GPNMB-204ENST00000459927 TRIB2Q92519 343 aa15.09■□□□□ 0.01
GPNMB-204ENST00000459927 USP6NLQ92738 828 aa15.09■□□□□ 0.01
GPNMB-204ENST00000459927 EAF2Q96CJ1 260 aaPredicted RBP15.09■□□□□ 0.01
GPNMB-204ENST00000459927 TRIM34Q9BYJ4 488 aa15.09■□□□□ 0.01
GPNMB-204ENST00000459927 NBPF3Q9H094 633 aa15.09■□□□□ 0.01
GPNMB-204ENST00000459927 SAP30BPQ9UHR5 308 aaKnown RBP15.09■□□□□ 0.01
GPNMB-204ENST00000459927 OGDHLQ9ULD0 1010 aa15.09■□□□□ 0.01
GPNMB-204ENST00000459927 FLT1P17948 1338 aa15.09■□□□□ 0.01
GPNMB-204ENST00000459927 GDF11O95390 407 aa15.08■□□□□ 0
GPNMB-204ENST00000459927 BMP8BP34820 402 aa15.08■□□□□ 0
GPNMB-204ENST00000459927 MAP3K21Q5TCX8 1036 aa15.08■□□□□ 0
GPNMB-204ENST00000459927 TATDN1Q6P1N9 297 aa15.08■□□□□ 0
GPNMB-204ENST00000459927 USP17L2Q6R6M4 530 aa15.08■□□□□ 0
GPNMB-204ENST00000459927 GDF15Q99988 308 aa15.08■□□□□ 0
GPNMB-204ENST00000459927 DBNLQ9UJU6 430 aaKnown RBP15.08■□□□□ 0
GPNMB-204ENST00000459927 ZBTB21Q9ULJ3 1066 aa15.08■□□□□ 0
GPNMB-204ENST00000459927 SOX1O00570 391 aaPredicted RBP15.07■□□□□ 0
GPNMB-204ENST00000459927 HLA-DOAP06340 250 aa15.07■□□□□ 0
GPNMB-204ENST00000459927 MAPK4P31152 587 aa15.07■□□□□ 0
GPNMB-204ENST00000459927 C1orf115Q9H7X2 142 aa15.07■□□□□ 0
GPNMB-204ENST00000459927 ATAD5Q96QE3 1844 aa15.07■□□□□ 0
GPNMB-204ENST00000459927 LOC285556D6RIA3 1793 aa15.06■□□□□ 0
GPNMB-204ENST00000459927 ERVK-9P63128 1117 aa15.06■□□□□ 0
GPNMB-204ENST00000459927 ERVK-24P63145 666 aa15.06■□□□□ 0
GPNMB-204ENST00000459927 CACNB2Q08289 660 aaPredicted RBP15.06■□□□□ 0
GPNMB-204ENST00000459927 MORN1Q5T089 497 aa15.06■□□□□ 0
GPNMB-204ENST00000459927 CCAR1Q8IX12 1150 aaKnown RBP15.06■□□□□ 0
GPNMB-204ENST00000459927 TRMT44Q8IYL2 757 aaKnown RBP15.06■□□□□ 0
GPNMB-204ENST00000459927 PORCNQ9H237 461 aa15.06■□□□□ 0
GPNMB-204ENST00000459927 C11orf49Q9H6J7 331 aa15.06■□□□□ 0
GPNMB-204ENST00000459927 TLR7Q9NYK1 1049 aaKnown RBP15.06■□□□□ 0
GPNMB-204ENST00000459927 PLXNB2O15031 1838 aa15.06■□□□□ 0
GPNMB-204ENST00000459927 MYO5AQ9Y4I1 1855 aaKnown RBP15.06■□□□□ 0
GPNMB-204ENST00000459927 USP17L15C9J2P7 530 aa15.05■□□□□ -0
GPNMB-204ENST00000459927 USP17L13C9JLJ4 530 aa15.05■□□□□ -0
GPNMB-204ENST00000459927 USP17L11C9JVI0 530 aa15.05■□□□□ -0
GPNMB-204ENST00000459927 USP17L18D6R9N7 530 aa15.05■□□□□ -0
GPNMB-204ENST00000459927 USP17L22D6RA61 530 aa15.05■□□□□ -0
GPNMB-204ENST00000459927 USP17L17D6RBQ6 530 aa15.05■□□□□ -0
GPNMB-204ENST00000459927 USP17L19D6RCP7 530 aa15.05■□□□□ -0
GPNMB-204ENST00000459927 USP17L20D6RJB6 530 aa15.05■□□□□ -0
GPNMB-204ENST00000459927 IDH1O75874 414 aaKnown RBP15.05■□□□□ -0
GPNMB-204ENST00000459927 GH2P01242 217 aa15.05■□□□□ -0
GPNMB-204ENST00000459927 PRKAR2AP13861 404 aaKnown RBP15.05■□□□□ -0
GPNMB-204ENST00000459927 USP17L24Q0WX57 530 aa15.05■□□□□ -0
GPNMB-204ENST00000459927 LHX8Q68G74 356 aa15.05■□□□□ -0
GPNMB-204ENST00000459927 CATSPERGQ6ZRH7 1159 aa15.05■□□□□ -0
GPNMB-204ENST00000459927 GPR142Q7Z601 462 aa15.05■□□□□ -0
GPNMB-204ENST00000459927 PLEKHH3Q7Z736 793 aa15.05■□□□□ -0
GPNMB-204ENST00000459927 C7orf61Q8IZ16 206 aa15.05■□□□□ -0
GPNMB-204ENST00000459927 MAGEB6Q8N7X4 407 aa15.05■□□□□ -0
GPNMB-204ENST00000459927 MIGA1Q8NAN2 632 aa15.05■□□□□ -0
GPNMB-204ENST00000459927 GTF3C2Q8WUA4 911 aaPredicted RBP15.05■□□□□ -0
GPNMB-204ENST00000459927 LRCH3Q96II8 777 aa15.05■□□□□ -0
GPNMB-204ENST00000459927 ANTXR1Q9H6X2 564 aa15.05■□□□□ -0
GPNMB-204ENST00000459927 ZMYND8Q9ULU4 1186 aaPredicted RBP15.05■□□□□ -0
GPNMB-204ENST00000459927 SIPA1L1O43166 1804 aa15.04■□□□□ -0
GPNMB-204ENST00000459927 RLBP1P12271 317 aa15.04■□□□□ -0
GPNMB-204ENST00000459927 RGS2P41220 211 aa15.04■□□□□ -0
GPNMB-204ENST00000459927 USP5P45974 858 aa15.04■□□□□ -0
GPNMB-204ENST00000459927 PDE3AQ14432 1141 aa15.04■□□□□ -0
GPNMB-204ENST00000459927 CCL14Q16627 93 aa15.04■□□□□ -0
GPNMB-204ENST00000459927 CERKLQ49MI3 558 aaPredicted RBP15.04■□□□□ -0
GPNMB-204ENST00000459927 TTC6Q86TZ1 520 aa15.04■□□□□ -0
GPNMB-204ENST00000459927 CERS3Q8IU89 383 aa15.04■□□□□ -0
GPNMB-204ENST00000459927 SOCS4Q8WXH5 440 aa15.04■□□□□ -0
GPNMB-204ENST00000459927 EDC3Q96F86 508 aaKnown RBP15.04■□□□□ -0
GPNMB-204ENST00000459927 C12orf42Q96LP6 360 aa15.04■□□□□ -0
GPNMB-204ENST00000459927 PAGR1Q9BTK6 254 aa15.04■□□□□ -0
GPNMB-204ENST00000459927 SERPINB13Q9UIV8 391 aa15.04■□□□□ -0
GPNMB-204ENST00000459927 RABGAP1Q9Y3P9 1069 aa15.04■□□□□ -0
GPNMB-204ENST00000459927 NDUFB9Q9Y6M9 179 aa15.04■□□□□ -0
GPNMB-204ENST00000459927 CNMDO75829 334 aa15.03■□□□□ -0
GPNMB-204ENST00000459927 CCND3P30281 292 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms