RNA–Protein interactions for RNA: ENST00000459904.1

LMNA-209, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-209ENST00000459904 FLT1P17948 1338 aa18.52■□□□□ 0.56
LMNA-209ENST00000459904 HMGCRP04035 888 aa18.52■□□□□ 0.56
LMNA-209ENST00000459904 UQCRFS1P1P0C7P4 283 aa18.52■□□□□ 0.56
LMNA-209ENST00000459904 IRX3P78415 501 aaPredicted RBP18.52■□□□□ 0.56
LMNA-209ENST00000459904 NOL10Q9BSC4 688 aaKnown RBP18.52■□□□□ 0.56
LMNA-209ENST00000459904 PAGR1Q9BTK6 254 aa18.52■□□□□ 0.56
LMNA-209ENST00000459904 CCDC8Q9H0W5 538 aaPredicted RBP18.52■□□□□ 0.56
LMNA-209ENST00000459904 PI4KBQ9UBF8 816 aa18.52■□□□□ 0.56
LMNA-209ENST00000459904 GCLCP48506 637 aaPredicted RBP18.51■□□□□ 0.55
LMNA-209ENST00000459904 OS9Q13438 667 aaPredicted RBP18.51■□□□□ 0.55
LMNA-209ENST00000459904 CCL14Q16627 93 aa18.51■□□□□ 0.55
LMNA-209ENST00000459904 NECAB2Q7Z6G3 386 aa18.51■□□□□ 0.55
LMNA-209ENST00000459904 PORCNQ9H237 461 aa18.51■□□□□ 0.55
LMNA-209ENST00000459904 BACE1P56817 501 aa18.5■□□□□ 0.55
LMNA-209ENST00000459904 POLA2Q14181 598 aa18.5■□□□□ 0.55
LMNA-209ENST00000459904 CRACR2BQ8N4Y2 399 aaPredicted RBP18.5■□□□□ 0.55
LMNA-209ENST00000459904 MIGA1Q8NAN2 632 aa18.5■□□□□ 0.55
LMNA-209ENST00000459904 WDR18Q9BV38 432 aa18.5■□□□□ 0.55
LMNA-209ENST00000459904 AS3MTQ9HBK9 375 aa18.5■□□□□ 0.55
LMNA-209ENST00000459904 HMX1Q9NP08 348 aaPredicted RBP18.5■□□□□ 0.55
LMNA-209ENST00000459904 TMOD4Q9NZQ9 345 aa18.5■□□□□ 0.55
LMNA-209ENST00000459904 RBPJLQ9UBG7 517 aa18.5■□□□□ 0.55
LMNA-209ENST00000459904 MORF4L1Q9UBU8 362 aa18.5■□□□□ 0.55
LMNA-209ENST00000459904 HERC5Q9UII4 1024 aaKnown RBP18.5■□□□□ 0.55
LMNA-209ENST00000459904 MYH8P13535 1937 aa18.5■□□□□ 0.55
LMNA-209ENST00000459904 LAMA2P24043 3122 aaKnown RBP18.5■□□□□ 0.55
LMNA-209ENST00000459904 NAV1Q8NEY1 1877 aa18.5■□□□□ 0.55
LMNA-209ENST00000459904 SURF6O75683 361 aaKnown RBP18.49■□□□□ 0.55
LMNA-209ENST00000459904 HERVK_113P62684 666 aa18.49■□□□□ 0.55
LMNA-209ENST00000459904 EVX2Q03828 476 aa18.49■□□□□ 0.55
LMNA-209ENST00000459904 PABPC4Q13310 644 aaKnown RBP eCLIP18.49■□□□□ 0.551e-11■□□□□ 10
LMNA-209ENST00000459904 EMILIN3Q9NT22 766 aa18.49■□□□□ 0.55
LMNA-209ENST00000459904 ZBTB21Q9ULJ3 1066 aa18.49■□□□□ 0.55
LMNA-209ENST00000459904 A0A0C4DFX4 3053 aa18.49■□□□□ 0.55
LMNA-209ENST00000459904 ZNFX1Q9P2E3 1918 aaKnown RBP18.49■□□□□ 0.55
LMNA-209ENST00000459904 RPTORQ8N122 1335 aa18.49■□□□□ 0.55
LMNA-209ENST00000459904 IPO8O15397 1037 aaKnown RBP18.48■□□□□ 0.55
LMNA-209ENST00000459904 PRKAR2AP13861 404 aaKnown RBP18.48■□□□□ 0.55
LMNA-209ENST00000459904 CYP7A1P22680 504 aa18.48■□□□□ 0.55
LMNA-209ENST00000459904 CCND3P30281 292 aaPredicted RBP18.48■□□□□ 0.55
LMNA-209ENST00000459904 ATP8B2P98198 1209 aa18.48■□□□□ 0.55
LMNA-209ENST00000459904 CCDC158Q5M9N0 1113 aa18.48■□□□□ 0.55
LMNA-209ENST00000459904 TRIM34Q9BYJ4 488 aa18.48■□□□□ 0.55
LMNA-209ENST00000459904 ANTXR1Q9H6X2 564 aa18.48■□□□□ 0.55
LMNA-209ENST00000459904 DBNLQ9UJU6 430 aaKnown RBP18.48■□□□□ 0.55
LMNA-209ENST00000459904 BAZ2AQ9UIF9 1905 aaKnown RBP18.48■□□□□ 0.55
LMNA-209ENST00000459904 USP17L10C9JJH3 530 aa18.47■□□□□ 0.55
LMNA-209ENST00000459904 BAG3O95817 575 aa18.47■□□□□ 0.55
LMNA-209ENST00000459904 MAP4K4O95819 1239 aaPredicted RBP18.47■□□□□ 0.55
LMNA-209ENST00000459904 GH2P01242 217 aa18.47■□□□□ 0.55
LMNA-209ENST00000459904 ASNSP08243 561 aa18.47■□□□□ 0.55
LMNA-209ENST00000459904 RLBP1P12271 317 aa18.47■□□□□ 0.55
LMNA-209ENST00000459904 PPP4CP60510 307 aa18.47■□□□□ 0.55
LMNA-209ENST00000459904 Q7L0L9 218 aa18.47■□□□□ 0.55
LMNA-209ENST00000459904 PFASO15067 1338 aa18.47■□□□□ 0.55
LMNA-209ENST00000459904 IDH1O75874 414 aaKnown RBP18.46■□□□□ 0.55
LMNA-209ENST00000459904 CACNB2Q08289 660 aaPredicted RBP18.46■□□□□ 0.55
LMNA-209ENST00000459904 GPRC5AQ8NFJ5 357 aa18.46■□□□□ 0.55
LMNA-209ENST00000459904 SSH3Q8TE77 659 aa18.46■□□□□ 0.55
LMNA-209ENST00000459904 EAF2Q96CJ1 260 aaPredicted RBP18.46■□□□□ 0.55
LMNA-209ENST00000459904 BCL11AQ9H165 835 aa18.46■□□□□ 0.55
LMNA-209ENST00000459904 DHX36Q9H2U1 1008 aaKnown RBP18.46■□□□□ 0.55
LMNA-209ENST00000459904 C11orf49Q9H6J7 331 aa18.46■□□□□ 0.55
LMNA-209ENST00000459904 CNMDO75829 334 aa18.45■□□□□ 0.54
LMNA-209ENST00000459904 HOXA7P31268 230 aaPredicted RBP18.45■□□□□ 0.54
LMNA-209ENST00000459904 ERVK-9P63128 1117 aa18.45■□□□□ 0.54
LMNA-209ENST00000459904 ERVK-24P63145 666 aa18.45■□□□□ 0.54
LMNA-209ENST00000459904 METTL16Q86W50 562 aaKnown RBP18.45■□□□□ 0.54
LMNA-209ENST00000459904 FOXP4Q8IVH2 680 aaPredicted RBP18.45■□□□□ 0.54
LMNA-209ENST00000459904 ACER1Q8TDN7 264 aa18.45■□□□□ 0.54
LMNA-209ENST00000459904 GDF15Q99988 308 aa18.45■□□□□ 0.54
LMNA-209ENST00000459904 NUDT12Q9BQG2 462 aa18.45■□□□□ 0.54
LMNA-209ENST00000459904 TBC1D2Q9BYX2 928 aa18.45■□□□□ 0.54
LMNA-209ENST00000459904 NBPF3Q9H094 633 aa18.45■□□□□ 0.54
LMNA-209ENST00000459904 GPR108Q9NPR9 543 aa18.45■□□□□ 0.54
LMNA-209ENST00000459904 SMCHD1A6NHR9 2005 aa18.44■□□□□ 0.54
LMNA-209ENST00000459904 PLCG2P16885 1265 aa18.44■□□□□ 0.54
LMNA-209ENST00000459904 MAGEA10P43363 369 aaPredicted RBP18.44■□□□□ 0.54
LMNA-209ENST00000459904 ZKSCAN2Q63HK3 967 aa18.44■□□□□ 0.54
LMNA-209ENST00000459904 GPR142Q7Z601 462 aa18.44■□□□□ 0.54
LMNA-209ENST00000459904 MAGEB6Q8N7X4 407 aa18.44■□□□□ 0.54
LMNA-209ENST00000459904 FLRT1Q9NZU1 646 aa18.44■□□□□ 0.54
LMNA-209ENST00000459904 OGDHLQ9ULD0 1010 aa18.44■□□□□ 0.54
LMNA-209ENST00000459904 RLFQ13129 1914 aa18.44■□□□□ 0.54
LMNA-209ENST00000459904 COL11A1P12107 1806 aaPredicted RBP18.44■□□□□ 0.54
LMNA-209ENST00000459904 C19orf81C9J6K1 198 aa18.43■□□□□ 0.54
LMNA-209ENST00000459904 ZKSCAN1P17029 563 aaPredicted RBP18.43■□□□□ 0.54
LMNA-209ENST00000459904 USP5P45974 858 aa18.43■□□□□ 0.54
LMNA-209ENST00000459904 MAP3K21Q5TCX8 1036 aa18.43■□□□□ 0.54
LMNA-209ENST00000459904 WDR78Q5VTH9 848 aa18.43■□□□□ 0.54
LMNA-209ENST00000459904 ITPRIPQ8IWB1 547 aa18.43■□□□□ 0.54
LMNA-209ENST00000459904 SLC17A8Q8NDX2 589 aa18.43■□□□□ 0.54
LMNA-209ENST00000459904 USP6NLQ92738 828 aa18.43■□□□□ 0.54
LMNA-209ENST00000459904 HLA-DOAP06340 250 aa18.42■□□□□ 0.54
LMNA-209ENST00000459904 RAB3GAP1Q15042 981 aa18.42■□□□□ 0.54
LMNA-209ENST00000459904 LRRC26Q2I0M4 334 aa18.42■□□□□ 0.54
LMNA-209ENST00000459904 MORN1Q5T089 497 aa18.42■□□□□ 0.54
LMNA-209ENST00000459904 USP17L2Q6R6M4 530 aa18.42■□□□□ 0.54
LMNA-209ENST00000459904 PLEKHH3Q7Z736 793 aa18.42■□□□□ 0.54
LMNA-209ENST00000459904 CCAR1Q8IX12 1150 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms