RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 GIMAP6Q6P9H5 292 aa26.05■■□□□ 1.76
SSNA1-202ENST00000459860 PTPN18Q99952 460 aa26.05■■□□□ 1.76
SSNA1-202ENST00000459860 NACAP1Q9BZK3 213 aa26.05■■□□□ 1.76
SSNA1-202ENST00000459860 GINM1Q9NU53 330 aa26.05■■□□□ 1.76
SSNA1-202ENST00000459860 TAOK2Q9UL54 1235 aa26.05■■□□□ 1.76
SSNA1-202ENST00000459860 ZHX2Q9Y6X8 837 aa26.05■■□□□ 1.76
SSNA1-202ENST00000459860 TESPA1A2RU30 521 aaPredicted RBP26.04■■□□□ 1.76
SSNA1-202ENST00000459860 ASNSP08243 561 aa26.04■■□□□ 1.76
SSNA1-202ENST00000459860 SEC62Q99442 399 aaKnown RBP26.04■■□□□ 1.76
SSNA1-202ENST00000459860 TBC1D2Q9BYX2 928 aa26.04■■□□□ 1.76
SSNA1-202ENST00000459860 HELLSQ9NRZ9 838 aa26.04■■□□□ 1.76
SSNA1-202ENST00000459860 HTTP42858 3142 aa26.03■■□□□ 1.76
SSNA1-202ENST00000459860 HIP1O00291 1037 aa26.03■■□□□ 1.76
SSNA1-202ENST00000459860 TDO2P48775 406 aa26.03■■□□□ 1.76
SSNA1-202ENST00000459860 TTC22Q5TAA0 569 aa26.03■■□□□ 1.76
SSNA1-202ENST00000459860 MS4A4AQ96JQ5 239 aa26.03■■□□□ 1.76
SSNA1-202ENST00000459860 SWAP70Q9UH65 585 aa26.03■■□□□ 1.76
SSNA1-202ENST00000459860 GSG1L2A8MUP6 293 aa26.02■■□□□ 1.76
SSNA1-202ENST00000459860 USP17L12C9JPN9 530 aa26.02■■□□□ 1.76
SSNA1-202ENST00000459860 USP17L21D6R901 530 aa26.02■■□□□ 1.76
SSNA1-202ENST00000459860 GDF11O95390 407 aa26.02■■□□□ 1.76
SSNA1-202ENST00000459860 CYP2D6P10635 497 aa26.02■■□□□ 1.76
SSNA1-202ENST00000459860 TATDN1Q6P1N9 297 aa26.02■■□□□ 1.76
SSNA1-202ENST00000459860 AS3MTQ9HBK9 375 aa26.02■■□□□ 1.76
SSNA1-202ENST00000459860 DIAPH3Q9NSV4 1193 aa26.02■■□□□ 1.76
SSNA1-202ENST00000459860 KCNH4Q9UQ05 1017 aa26.02■■□□□ 1.76
SSNA1-202ENST00000459860 PTPRFP10586 1907 aa26.02■■□□□ 1.76
SSNA1-202ENST00000459860 USP17L5A8MUK1 530 aa26.01■■□□□ 1.75
SSNA1-202ENST00000459860 PATL2C9JE40 543 aaKnown RBP26.01■■□□□ 1.75
SSNA1-202ENST00000459860 CXCL11O14625 94 aa26.01■■□□□ 1.75
SSNA1-202ENST00000459860 CERKLQ49MI3 558 aaPredicted RBP26.01■■□□□ 1.75
SSNA1-202ENST00000459860 C12orf60Q5U649 245 aa26.01■■□□□ 1.75
SSNA1-202ENST00000459860 OTOP1Q7RTM1 612 aa26.01■■□□□ 1.75
SSNA1-202ENST00000459860 BRI3BPQ8WY22 251 aa26.01■■□□□ 1.75
SSNA1-202ENST00000459860 SDSP20132 328 aa26■■□□□ 1.75
SSNA1-202ENST00000459860 GABPAQ06546 454 aa26■■□□□ 1.75
SSNA1-202ENST00000459860 CRHR2Q13324 411 aa26■■□□□ 1.75
SSNA1-202ENST00000459860 RRP1BQ14684 758 aaKnown RBP26■■□□□ 1.75
SSNA1-202ENST00000459860 MCMDC2Q4G0Z9 681 aa26■■□□□ 1.75
SSNA1-202ENST00000459860 CTR9Q6PD62 1173 aa26■■□□□ 1.75
SSNA1-202ENST00000459860 CABP5Q9NP86 173 aa26■■□□□ 1.75
SSNA1-202ENST00000459860 ZBTB21Q9ULJ3 1066 aa26■■□□□ 1.75
SSNA1-202ENST00000459860 TRIM17Q9Y577 477 aa26■■□□□ 1.75
SSNA1-202ENST00000459860 MFAP1P55081 439 aaKnown RBP25.99■■□□□ 1.75
SSNA1-202ENST00000459860 NMIQ13287 307 aaPredicted RBP25.99■■□□□ 1.75
SSNA1-202ENST00000459860 SBK1Q52WX2 424 aa25.99■■□□□ 1.75
SSNA1-202ENST00000459860 ERICH6BQ5W0A0 696 aa25.99■■□□□ 1.75
SSNA1-202ENST00000459860 CCDC129Q6ZRS4 1044 aa25.99■■□□□ 1.75
SSNA1-202ENST00000459860 FAM227BQ96M60 508 aa25.99■■□□□ 1.75
SSNA1-202ENST00000459860 NAPBQ9H115 298 aa25.99■■□□□ 1.75
SSNA1-202ENST00000459860 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.99■■□□□ 1.75
SSNA1-202ENST00000459860 AFG3L2Q9Y4W6 797 aa25.99■■□□□ 1.75
SSNA1-202ENST00000459860 A0A0D9SFI3 127 aa25.98■■□□□ 1.75
SSNA1-202ENST00000459860 TRIM75PA6NK02 468 aa25.98■■□□□ 1.75
SSNA1-202ENST00000459860 SHMT1P34896 483 aa25.98■■□□□ 1.75
SSNA1-202ENST00000459860 CAP1Q01518 475 aa25.98■■□□□ 1.75
SSNA1-202ENST00000459860 ABCB5Q2M3G0 1257 aa25.98■■□□□ 1.75
SSNA1-202ENST00000459860 PRPF38BQ5VTL8 546 aaKnown RBP25.98■■□□□ 1.75
SSNA1-202ENST00000459860 IFNL3Q8IZI9 196 aa25.98■■□□□ 1.75
SSNA1-202ENST00000459860 ZNF280CQ8ND82 737 aa25.98■■□□□ 1.75
SSNA1-202ENST00000459860 EPB41L4AQ9HCS5 686 aaPredicted RBP25.98■■□□□ 1.75
SSNA1-202ENST00000459860 CYP2D7A0A087X1C5 515 aa25.97■■□□□ 1.75
SSNA1-202ENST00000459860 MINDY4BA8MYZ0 360 aa25.97■■□□□ 1.75
SSNA1-202ENST00000459860 GH2P01242 217 aa25.97■■□□□ 1.75
SSNA1-202ENST00000459860 GSPT1P15170 499 aaKnown RBP25.97■■□□□ 1.75
SSNA1-202ENST00000459860 FASTKD5Q7L8L6 764 aaKnown RBP25.97■■□□□ 1.75
SSNA1-202ENST00000459860 CCDC84Q86UT8 332 aaPredicted RBP25.97■■□□□ 1.75
SSNA1-202ENST00000459860 ZCCHC17Q9NP64 241 aaKnown RBP25.97■■□□□ 1.75
SSNA1-202ENST00000459860 A0A0G2JLL6 359 aaPredicted RBP25.96■■□□□ 1.75
SSNA1-202ENST00000459860 EVX2Q03828 476 aa25.96■■□□□ 1.75
SSNA1-202ENST00000459860 PRRT2Q7Z6L0 340 aaPredicted RBP25.96■■□□□ 1.75
SSNA1-202ENST00000459860 DYNLL2Q96FJ2 89 aa25.96■■□□□ 1.75
SSNA1-202ENST00000459860 LOC285556D6RIA3 1793 aa25.95■■□□□ 1.75
SSNA1-202ENST00000459860 CCDC171Q6TFL3 1326 aa25.95■■□□□ 1.75
SSNA1-202ENST00000459860 MPHOSPH10O00566 681 aaKnown RBP25.95■■□□□ 1.74
SSNA1-202ENST00000459860 SPP2Q13103 211 aa25.95■■□□□ 1.74
SSNA1-202ENST00000459860 TAF1CQ15572 869 aaPredicted RBP25.95■■□□□ 1.74
SSNA1-202ENST00000459860 GADL1Q6ZQY3 521 aa25.95■■□□□ 1.74
SSNA1-202ENST00000459860 C16orf86Q6ZW13 317 aa25.95■■□□□ 1.74
SSNA1-202ENST00000459860 SLC44A5Q8NCS7 719 aa25.95■■□□□ 1.74
SSNA1-202ENST00000459860 CD99L2Q8TCZ2 262 aa25.95■■□□□ 1.74
SSNA1-202ENST00000459860 PTPN22Q9Y2R2 807 aa25.95■■□□□ 1.74
SSNA1-202ENST00000459860 ROBO3Q96MS0 1386 aa25.95■■□□□ 1.74
SSNA1-202ENST00000459860 BTBD19C9JJ37 291 aa25.94■■□□□ 1.74
SSNA1-202ENST00000459860 SLC3A2P08195 630 aaKnown RBP25.94■■□□□ 1.74
SSNA1-202ENST00000459860 RAB3GAP1Q15042 981 aa25.94■■□□□ 1.74
SSNA1-202ENST00000459860 CWC27Q6UX04 472 aaKnown RBP25.94■■□□□ 1.74
SSNA1-202ENST00000459860 ANKRD23Q86SG2 305 aa25.94■■□□□ 1.74
SSNA1-202ENST00000459860 FAM43AQ8N2R8 423 aa25.94■■□□□ 1.74
SSNA1-202ENST00000459860 ERO1AQ96HE7 468 aa25.94■■□□□ 1.74
SSNA1-202ENST00000459860 WDR18Q9BV38 432 aa25.94■■□□□ 1.74
SSNA1-202ENST00000459860 ZNF287Q9HBT7 754 aa25.94■■□□□ 1.74
SSNA1-202ENST00000459860 PDE4DIPQ5VU43 2346 aa25.94■■□□□ 1.74
SSNA1-202ENST00000459860 CDK8P49336 464 aa25.93■■□□□ 1.74
SSNA1-202ENST00000459860 CCDC17Q96LX7 622 aa25.93■■□□□ 1.74
SSNA1-202ENST00000459860 ZFYVE28Q9HCC9 887 aa25.93■■□□□ 1.74
SSNA1-202ENST00000459860 JAG1P78504 1218 aa25.92■■□□□ 1.74
SSNA1-202ENST00000459860 SP3Q02447 781 aa25.92■■□□□ 1.74
SSNA1-202ENST00000459860 SHROOM1Q2M3G4 852 aaPredicted RBP25.92■■□□□ 1.74
SSNA1-202ENST00000459860 FEZ1Q99689 392 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms