RNA–Protein interactions for RNA: ENST00000459746.5

CCDC66-209, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 628 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-209ENST00000459746 COX4I2Q96KJ9 171 aa9.42□□□□□ -0.9
CCDC66-209ENST00000459746 NT5C1AQ9BXI3 368 aa9.42□□□□□ -0.9
CCDC66-209ENST00000459746 TJP2Q9UDY2 1190 aa9.42□□□□□ -0.9
CCDC66-209ENST00000459746 ADAMTS1Q9UHI8 967 aa9.42□□□□□ -0.9
CCDC66-209ENST00000459746 WNT11O96014 354 aa9.41□□□□□ -0.9
CCDC66-209ENST00000459746 PRNPP04156 253 aa9.41□□□□□ -0.9
CCDC66-209ENST00000459746 YARSP54577 528 aaKnown RBP9.41□□□□□ -0.9
CCDC66-209ENST00000459746 PRAMEF13Q5VWM6 474 aa9.41□□□□□ -0.9
CCDC66-209ENST00000459746 FAM214BQ7L5A3 538 aa9.41□□□□□ -0.9
CCDC66-209ENST00000459746 NETO1Q8TDF5 533 aa9.41□□□□□ -0.9
CCDC66-209ENST00000459746 MISP3Q96FF7 219 aa9.41□□□□□ -0.9
CCDC66-209ENST00000459746 SPON2Q9BUD6 331 aa9.41□□□□□ -0.9
CCDC66-209ENST00000459746 PODXL2Q9NZ53 605 aa9.41□□□□□ -0.9
CCDC66-209ENST00000459746 KIAA1522Q9P206 1035 aaPredicted RBP9.41□□□□□ -0.9
CCDC66-209ENST00000459746 ZC3H7BQ9UGR2 993 aaKnown RBP9.41□□□□□ -0.9
CCDC66-209ENST00000459746 SLITRK5O94991 958 aa9.4□□□□□ -0.9
CCDC66-209ENST00000459746 CYP7A1P22680 504 aa9.4□□□□□ -0.9
CCDC66-209ENST00000459746 KIAA0825Q8IV33 1275 aa9.4□□□□□ -0.9
CCDC66-209ENST00000459746 STK11IPQ8N1F8 1099 aa9.4□□□□□ -0.9
CCDC66-209ENST00000459746 REXO1Q8N1G1 1221 aaKnown RBP9.4□□□□□ -0.9
CCDC66-209ENST00000459746 PRDM5Q9NQX1 630 aaPredicted RBP9.4□□□□□ -0.9
CCDC66-209ENST00000459746 MAPK8IP1Q9UQF2 711 aa9.4□□□□□ -0.9
CCDC66-209ENST00000459746 UNCXA6NJT0 531 aa9.39□□□□□ -0.91
CCDC66-209ENST00000459746 EOMESO95936 686 aa9.39□□□□□ -0.91
CCDC66-209ENST00000459746 APOBRQ0VD83 1088 aa9.39□□□□□ -0.91
CCDC66-209ENST00000459746 LETMD1Q6P1Q0 360 aa9.39□□□□□ -0.91
CCDC66-209ENST00000459746 ACSF2Q96CM8 615 aaPredicted RBP9.39□□□□□ -0.91
CCDC66-209ENST00000459746 HEXIM2Q96MH2 286 aaKnown RBP9.39□□□□□ -0.91
CCDC66-209ENST00000459746 DDX41Q9UJV9 622 aaKnown RBP9.39□□□□□ -0.91
CCDC66-209ENST00000459746 ANGEL1Q9UNK9 670 aaKnown RBP9.39□□□□□ -0.91
CCDC66-209ENST00000459746 SNX11Q9Y5W9 270 aa9.39□□□□□ -0.91
CCDC66-209ENST00000459746 TMEM265A0A087WTH1 108 aa9.38□□□□□ -0.91
CCDC66-209ENST00000459746 ATE1O95260 518 aa9.38□□□□□ -0.91
CCDC66-209ENST00000459746 HTR3BO95264 441 aa9.38□□□□□ -0.91
CCDC66-209ENST00000459746 OXCT1P55809 520 aa9.38□□□□□ -0.91
CCDC66-209ENST00000459746 IFI16Q16666 785 aaKnown RBP9.38□□□□□ -0.91
CCDC66-209ENST00000459746 VSIG10LQ86VR7 867 aa9.38□□□□□ -0.91
CCDC66-209ENST00000459746 SLFN12Q8IYM2 578 aa9.38□□□□□ -0.91
CCDC66-209ENST00000459746 ZNF654Q8IZM8 581 aa9.38□□□□□ -0.91
CCDC66-209ENST00000459746 FBXO27Q8NI29 283 aa9.38□□□□□ -0.91
CCDC66-209ENST00000459746 MIPEPQ99797 713 aa9.38□□□□□ -0.91
CCDC66-209ENST00000459746 REV1Q9UBZ9 1251 aa9.38□□□□□ -0.91
CCDC66-209ENST00000459746 TPX2Q9ULW0 747 aaKnown RBP9.38□□□□□ -0.91
CCDC66-209ENST00000459746 POLR3KQ9Y2Y1 108 aaPredicted RBP9.38□□□□□ -0.91
CCDC66-209ENST00000459746 CORINQ9Y5Q5 1042 aa9.38□□□□□ -0.91
CCDC66-209ENST00000459746 GNAT3A8MTJ3 354 aa9.37□□□□□ -0.91
CCDC66-209ENST00000459746 ETV3P41162 512 aa9.37□□□□□ -0.91
CCDC66-209ENST00000459746 ZNF165P49910 485 aa9.37□□□□□ -0.91
CCDC66-209ENST00000459746 C22orf34Q6ZV56 151 aa9.37□□□□□ -0.91
CCDC66-209ENST00000459746 SLITRK4Q8IW52 837 aa9.37□□□□□ -0.91
CCDC66-209ENST00000459746 NKD1Q969G9 470 aa9.37□□□□□ -0.91
CCDC66-209ENST00000459746 FBXL18Q96ME1 805 aa9.37□□□□□ -0.91
CCDC66-209ENST00000459746 EHMT1Q9H9B1 1298 aa9.37□□□□□ -0.91
CCDC66-209ENST00000459746 CCDC39Q9UFE4 941 aa9.37□□□□□ -0.91
CCDC66-209ENST00000459746 VAV3Q9UKW4 847 aa9.37□□□□□ -0.91
CCDC66-209ENST00000459746 TLR3O15455 904 aaKnown RBP9.36□□□□□ -0.91
CCDC66-209ENST00000459746 CEACAM5P06731 702 aa9.36□□□□□ -0.91
CCDC66-209ENST00000459746 SFRP5Q5T4F7 317 aa9.36□□□□□ -0.91
CCDC66-209ENST00000459746 METTL16Q86W50 562 aaKnown RBP9.36□□□□□ -0.91
CCDC66-209ENST00000459746 FAM13CQ8NE31 585 aa9.36□□□□□ -0.91
CCDC66-209ENST00000459746 SPATA32Q96LK8 384 aa9.36□□□□□ -0.91
CCDC66-209ENST00000459746 BRMS1Q9HCU9 246 aa9.36□□□□□ -0.91
CCDC66-209ENST00000459746 UBP1Q9NZI7 540 aa9.36□□□□□ -0.91
CCDC66-209ENST00000459746 CEP131Q9UPN4 1083 aa9.36□□□□□ -0.91
CCDC66-209ENST00000459746 GRIN3BO60391 1043 aa9.35□□□□□ -0.91
CCDC66-209ENST00000459746 LRRFIP1Q32MZ4 808 aaKnown RBP9.35□□□□□ -0.91
CCDC66-209ENST00000459746 FAM181AQ8N9Y4 354 aa9.35□□□□□ -0.91
CCDC66-209ENST00000459746 CYB5D2Q8WUJ1 264 aa9.35□□□□□ -0.91
CCDC66-209ENST00000459746 TNKS2Q9H2K2 1166 aa9.35□□□□□ -0.91
CCDC66-209ENST00000459746 PCDHB14Q9Y5E9 798 aa9.35□□□□□ -0.91
CCDC66-209ENST00000459746 KIR3DL1P43629 444 aa9.34□□□□□ -0.91
CCDC66-209ENST00000459746 CRKP46108 304 aa9.34□□□□□ -0.91
CCDC66-209ENST00000459746 PRKCQQ04759 706 aa9.34□□□□□ -0.91
CCDC66-209ENST00000459746 SEZ6Q53EL9 994 aa9.34□□□□□ -0.91
CCDC66-209ENST00000459746 ZNF394Q53GI3 561 aa9.34□□□□□ -0.91
CCDC66-209ENST00000459746 PLD6Q8N2A8 252 aaKnown RBP9.34□□□□□ -0.91
CCDC66-209ENST00000459746 EAF1Q96JC9 268 aaPredicted RBP9.34□□□□□ -0.91
CCDC66-209ENST00000459746 KRTAP4-8Q9BYQ9 185 aa9.34□□□□□ -0.91
CCDC66-209ENST00000459746 SLC5A6Q9Y289 635 aa9.34□□□□□ -0.91
CCDC66-209ENST00000459746 MCM4P33991 863 aa9.33□□□□□ -0.92
CCDC66-209ENST00000459746 NT5DC4Q86YG4 428 aa9.33□□□□□ -0.92
CCDC66-209ENST00000459746 RIN3Q8TB24 985 aa9.33□□□□□ -0.92
CCDC66-209ENST00000459746 XAGE3Q8WTP9 111 aa9.33□□□□□ -0.92
CCDC66-209ENST00000459746 CCDC74BQ96LY2 380 aa9.33□□□□□ -0.92
CCDC66-209ENST00000459746 UPK3BL1B0FP48 263 aa9.32□□□□□ -0.92
CCDC66-209ENST00000459746 UPK3BL2E5RIL1 263 aa9.32□□□□□ -0.92
CCDC66-209ENST00000459746 ZNF865P0CJ78 1059 aaPredicted RBP9.32□□□□□ -0.92
CCDC66-209ENST00000459746 IMPDH2P12268 514 aa9.32□□□□□ -0.92
CCDC66-209ENST00000459746 CLCN7P51798 805 aa9.32□□□□□ -0.92
CCDC66-209ENST00000459746 GP2P55259 537 aaKnown RBP9.32□□□□□ -0.92
CCDC66-209ENST00000459746 RACK1P63244 317 aaKnown RBP9.32□□□□□ -0.92
CCDC66-209ENST00000459746 HDLBPQ00341 1268 aaKnown RBP9.32□□□□□ -0.92
CCDC66-209ENST00000459746 COL9A2Q14055 689 aaPredicted RBP9.32□□□□□ -0.92
CCDC66-209ENST00000459746 CDH24Q86UP0 819 aa9.32□□□□□ -0.92
CCDC66-209ENST00000459746 AGBL5Q8NDL9 886 aa9.32□□□□□ -0.92
CCDC66-209ENST00000459746 HRASLS5Q96KN8 279 aa9.32□□□□□ -0.92
CCDC66-209ENST00000459746 DPH2Q9BQC3 489 aaPredicted RBP9.32□□□□□ -0.92
CCDC66-209ENST00000459746 GMIPQ9P107 970 aa9.32□□□□□ -0.92
CCDC66-209ENST00000459746 PCDHGB7Q9Y5F8 929 aa9.32□□□□□ -0.92
CCDC66-209ENST00000459746 SLC22A31A6NKX4 558 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms