RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 PRAMEF13Q5VWM6 474 aa5.04□□□□□ -1.6
SCARNA18-201ENST00000459004 FAM214BQ7L5A3 538 aa5.04□□□□□ -1.6
SCARNA18-201ENST00000459004 ZNF654Q8IZM8 581 aa5.04□□□□□ -1.6
SCARNA18-201ENST00000459004 NKD1Q969G9 470 aa5.04□□□□□ -1.6
SCARNA18-201ENST00000459004 ZNF428Q96B54 188 aa5.04□□□□□ -1.6
SCARNA18-201ENST00000459004 ACSF2Q96CM8 615 aaPredicted RBP5.04□□□□□ -1.6
SCARNA18-201ENST00000459004 EAF1Q96JC9 268 aaPredicted RBP5.04□□□□□ -1.6
SCARNA18-201ENST00000459004 MKNK2Q9HBH9 465 aa5.04□□□□□ -1.6
SCARNA18-201ENST00000459004 LRRC4CQ9HCJ2 640 aa5.04□□□□□ -1.6
SCARNA18-201ENST00000459004 ZFP64Q9NPA5 681 aa5.04□□□□□ -1.6
SCARNA18-201ENST00000459004 GTF2IRD1Q9UHL9 959 aa5.04□□□□□ -1.6
SCARNA18-201ENST00000459004 PCDHGB7Q9Y5F8 929 aa5.04□□□□□ -1.6
SCARNA18-201ENST00000459004 KIAA1324LA8MWY0 1029 aaPredicted RBP5.03□□□□□ -1.6
SCARNA18-201ENST00000459004 IGF2BP3O00425 579 aaKnown RBP eCLIP5.03□□□□□ -1.6
SCARNA18-201ENST00000459004 GRIN3BO60391 1043 aa5.03□□□□□ -1.6
SCARNA18-201ENST00000459004 ATE1O95260 518 aa5.03□□□□□ -1.6
SCARNA18-201ENST00000459004 EOMESO95936 686 aa5.03□□□□□ -1.6
SCARNA18-201ENST00000459004 CRKP46108 304 aa5.03□□□□□ -1.6
SCARNA18-201ENST00000459004 APOBRQ0VD83 1088 aa5.03□□□□□ -1.6
SCARNA18-201ENST00000459004 MLECQ14165 292 aa5.03□□□□□ -1.6
SCARNA18-201ENST00000459004 SEZ6Q53EL9 994 aa5.03□□□□□ -1.6
SCARNA18-201ENST00000459004 C9orf131Q5VYM1 1079 aa5.03□□□□□ -1.6
SCARNA18-201ENST00000459004 DTX1Q86Y01 620 aa5.03□□□□□ -1.6
SCARNA18-201ENST00000459004 NT5DC4Q86YG4 428 aa5.03□□□□□ -1.6
SCARNA18-201ENST00000459004 SLITRK4Q8IW52 837 aa5.03□□□□□ -1.6
SCARNA18-201ENST00000459004 FAM13CQ8NE31 585 aa5.03□□□□□ -1.6
SCARNA18-201ENST00000459004 MIPEPQ99797 713 aa5.03□□□□□ -1.6
SCARNA18-201ENST00000459004 BRMS1Q9HCU9 246 aa5.03□□□□□ -1.6
SCARNA18-201ENST00000459004 PCMTD2Q9NV79 361 aa5.03□□□□□ -1.6
SCARNA18-201ENST00000459004 UBP1Q9NZI7 540 aa5.03□□□□□ -1.6
SCARNA18-201ENST00000459004 REV1Q9UBZ9 1251 aa5.03□□□□□ -1.6
SCARNA18-201ENST00000459004 UPK3BL1B0FP48 263 aa5.02□□□□□ -1.61
SCARNA18-201ENST00000459004 UPK3BL2E5RIL1 263 aa5.02□□□□□ -1.61
SCARNA18-201ENST00000459004 HTR3BO95264 441 aa5.02□□□□□ -1.61
SCARNA18-201ENST00000459004 SPINK2P20155 84 aa5.02□□□□□ -1.61
SCARNA18-201ENST00000459004 ZNF165P49910 485 aa5.02□□□□□ -1.61
SCARNA18-201ENST00000459004 YARSP54577 528 aaKnown RBP5.02□□□□□ -1.61
SCARNA18-201ENST00000459004 MSMPQ1L6U9 139 aa5.02□□□□□ -1.61
SCARNA18-201ENST00000459004 ZNF746Q6NUN9 644 aaPredicted RBP5.02□□□□□ -1.61
SCARNA18-201ENST00000459004 LETMD1Q6P1Q0 360 aa5.02□□□□□ -1.61
SCARNA18-201ENST00000459004 ARHGAP27Q6ZUM4 889 aa5.02□□□□□ -1.61
SCARNA18-201ENST00000459004 REXO1Q8N1G1 1221 aaKnown RBP5.02□□□□□ -1.61
SCARNA18-201ENST00000459004 Q8N3U1 123 aa5.02□□□□□ -1.61
SCARNA18-201ENST00000459004 RIN3Q8TB24 985 aa5.02□□□□□ -1.61
SCARNA18-201ENST00000459004 XAGE3Q8WTP9 111 aa5.02□□□□□ -1.61
SCARNA18-201ENST00000459004 HEXIM2Q96MH2 286 aaKnown RBP5.02□□□□□ -1.61
SCARNA18-201ENST00000459004 EHMT1Q9H9B1 1298 aa5.02□□□□□ -1.61
SCARNA18-201ENST00000459004 ZC3H7BQ9UGR2 993 aaKnown RBP5.02□□□□□ -1.61
SCARNA18-201ENST00000459004 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.02□□□□□ -1.61
SCARNA18-201ENST00000459004 PCDHB14Q9Y5E9 798 aa5.02□□□□□ -1.61
SCARNA18-201ENST00000459004 CHURC1-FNTBB4DL54 471 aa5.01□□□□□ -1.61
SCARNA18-201ENST00000459004 MCM4P33991 863 aa5.01□□□□□ -1.61
SCARNA18-201ENST00000459004 OXCT1P55809 520 aa5.01□□□□□ -1.61
SCARNA18-201ENST00000459004 SLFN12Q8IYM2 578 aa5.01□□□□□ -1.61
SCARNA18-201ENST00000459004 NETO1Q8TDF5 533 aa5.01□□□□□ -1.61
SCARNA18-201ENST00000459004 TGIF2Q9GZN2 237 aa5.01□□□□□ -1.61
SCARNA18-201ENST00000459004 PRDM5Q9NQX1 630 aaPredicted RBP5.01□□□□□ -1.61
SCARNA18-201ENST00000459004 BSDC1Q9NW68 430 aaPredicted RBP5.01□□□□□ -1.61
SCARNA18-201ENST00000459004 TPX2Q9ULW0 747 aaKnown RBP5.01□□□□□ -1.61
SCARNA18-201ENST00000459004 CEP131Q9UPN4 1083 aa5.01□□□□□ -1.61
SCARNA18-201ENST00000459004 MAPK8IP1Q9UQF2 711 aa5.01□□□□□ -1.61
SCARNA18-201ENST00000459004 SLC22A31A6NKX4 558 aa5□□□□□ -1.61
SCARNA18-201ENST00000459004 E9PSI1 815 aa5□□□□□ -1.61
SCARNA18-201ENST00000459004 PRNPP04156 253 aa5□□□□□ -1.61
SCARNA18-201ENST00000459004 CEACAM5P06731 702 aa5□□□□□ -1.61
SCARNA18-201ENST00000459004 CYP7A1P22680 504 aa5□□□□□ -1.61
SCARNA18-201ENST00000459004 CLCQ05315 142 aa5□□□□□ -1.61
SCARNA18-201ENST00000459004 SFRP5Q5T4F7 317 aa5□□□□□ -1.61
SCARNA18-201ENST00000459004 GK5Q6ZS86 529 aa5□□□□□ -1.61
SCARNA18-201ENST00000459004 CDH24Q86UP0 819 aa5□□□□□ -1.61
SCARNA18-201ENST00000459004 FAM181AQ8N9Y4 354 aa5□□□□□ -1.61
SCARNA18-201ENST00000459004 CYB5D2Q8WUJ1 264 aa5□□□□□ -1.61
SCARNA18-201ENST00000459004 COX4I2Q96KJ9 171 aa5□□□□□ -1.61
SCARNA18-201ENST00000459004 SPATA32Q96LK8 384 aa5□□□□□ -1.61
SCARNA18-201ENST00000459004 DPH2Q9BQC3 489 aaPredicted RBP5□□□□□ -1.61
SCARNA18-201ENST00000459004 KLHL3Q9UH77 587 aa5□□□□□ -1.61
SCARNA18-201ENST00000459004 TMEM265A0A087WTH1 108 aa4.99□□□□□ -1.61
SCARNA18-201ENST00000459004 GNAT3A8MTJ3 354 aa4.99□□□□□ -1.61
SCARNA18-201ENST00000459004 WNT11O96014 354 aa4.99□□□□□ -1.61
SCARNA18-201ENST00000459004 TCF3P15923 654 aa4.99□□□□□ -1.61
SCARNA18-201ENST00000459004 ETV3P41162 512 aa4.99□□□□□ -1.61
SCARNA18-201ENST00000459004 RAD51AP2Q09MP3 1159 aa4.99□□□□□ -1.61
SCARNA18-201ENST00000459004 PAK2Q13177 524 aa4.99□□□□□ -1.61
SCARNA18-201ENST00000459004 COL9A2Q14055 689 aaPredicted RBP4.99□□□□□ -1.61
SCARNA18-201ENST00000459004 IFI16Q16666 785 aaKnown RBP4.99□□□□□ -1.61
SCARNA18-201ENST00000459004 LRRFIP1Q32MZ4 808 aaKnown RBP4.99□□□□□ -1.61
SCARNA18-201ENST00000459004 C22orf34Q6ZV56 151 aa4.99□□□□□ -1.61
SCARNA18-201ENST00000459004 NBPF11Q86T75 865 aa4.99□□□□□ -1.61
SCARNA18-201ENST00000459004 PLD6Q8N2A8 252 aaKnown RBP4.99□□□□□ -1.61
SCARNA18-201ENST00000459004 MISP3Q96FF7 219 aa4.99□□□□□ -1.61
SCARNA18-201ENST00000459004 CCDC74BQ96LY2 380 aa4.99□□□□□ -1.61
SCARNA18-201ENST00000459004 CCDC39Q9UFE4 941 aa4.99□□□□□ -1.61
SCARNA18-201ENST00000459004 PLAGL2Q9UPG8 496 aa4.99□□□□□ -1.61
SCARNA18-201ENST00000459004 SNX11Q9Y5W9 270 aa4.99□□□□□ -1.61
SCARNA18-201ENST00000459004 CNTNAP4Q9C0A0 1308 aa4.98□□□□□ -1.61
SCARNA18-201ENST00000459004 DNAJA2O60884 412 aa4.98□□□□□ -1.61
SCARNA18-201ENST00000459004 ZNF865P0CJ78 1059 aaPredicted RBP4.98□□□□□ -1.61
SCARNA18-201ENST00000459004 IMPDH2P12268 514 aa4.98□□□□□ -1.61
SCARNA18-201ENST00000459004 ERCC5P28715 1186 aaPredicted RBP4.98□□□□□ -1.61
SCARNA18-201ENST00000459004 KIR3DL1P43629 444 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms