RNA–Protein interactions for RNA: ENST00000458550.5

PRRC2B-207, Transcript of proline rich coiled-coil 2B, humanhuman

TSL 1 (best) BASIC

Gene PRRC2B, Length 899 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRC2B-207ENST00000458550 SGPL1O95470 568 aa16.5■□□□□ 0.23
PRRC2B-207ENST00000458550 TFRCP02786 760 aaKnown RBP16.5■□□□□ 0.23
PRRC2B-207ENST00000458550 BACE1P56817 501 aa16.5■□□□□ 0.23
PRRC2B-207ENST00000458550 MAP3K12Q12852 859 aa16.5■□□□□ 0.23
PRRC2B-207ENST00000458550 MTMR2Q13614 643 aa16.5■□□□□ 0.23
PRRC2B-207ENST00000458550 HSP90AB4PQ58FF6 505 aa16.5■□□□□ 0.23
PRRC2B-207ENST00000458550 CEP85Q6P2H3 762 aa16.5■□□□□ 0.23
PRRC2B-207ENST00000458550 AACSQ86V21 672 aa16.5■□□□□ 0.23
PRRC2B-207ENST00000458550 CERS3Q8IU89 383 aa16.5■□□□□ 0.23
PRRC2B-207ENST00000458550 MAGEB6Q8N7X4 407 aa16.5■□□□□ 0.23
PRRC2B-207ENST00000458550 SIPA1L1O43166 1804 aa16.49■□□□□ 0.23
PRRC2B-207ENST00000458550 GDF11O95390 407 aa16.49■□□□□ 0.23
PRRC2B-207ENST00000458550 CAPN2P17655 700 aa16.49■□□□□ 0.23
PRRC2B-207ENST00000458550 PANK1Q8TE04 598 aa16.49■□□□□ 0.23
PRRC2B-207ENST00000458550 COLQQ9Y215 455 aaPredicted RBP16.49■□□□□ 0.23
PRRC2B-207ENST00000458550 EXOC6BQ9Y2D4 811 aa16.49■□□□□ 0.23
PRRC2B-207ENST00000458550 USP17L10C9JJH3 530 aa16.48■□□□□ 0.23
PRRC2B-207ENST00000458550 FARP2O94887 1054 aaPredicted RBP16.48■□□□□ 0.23
PRRC2B-207ENST00000458550 METTL16Q86W50 562 aaKnown RBP16.48■□□□□ 0.23
PRRC2B-207ENST00000458550 CCAR1Q8IX12 1150 aaKnown RBP16.48■□□□□ 0.23
PRRC2B-207ENST00000458550 MIGA1Q8NAN2 632 aa16.48■□□□□ 0.23
PRRC2B-207ENST00000458550 DEFB118Q96PH6 123 aa16.48■□□□□ 0.23
PRRC2B-207ENST00000458550 ZBED9Q6R2W3 1325 aa16.47■□□□□ 0.23
PRRC2B-207ENST00000458550 HOXA7P31268 230 aaPredicted RBP16.47■□□□□ 0.23
PRRC2B-207ENST00000458550 TMED8Q6PL24 325 aaPredicted RBP16.47■□□□□ 0.23
PRRC2B-207ENST00000458550 P2RX7Q99572 595 aaKnown RBP16.47■□□□□ 0.23
PRRC2B-207ENST00000458550 BCL11AQ9H165 835 aa16.47■□□□□ 0.23
PRRC2B-207ENST00000458550 DNAJC18Q9H819 358 aa16.47■□□□□ 0.23
PRRC2B-207ENST00000458550 ZBTB21Q9ULJ3 1066 aa16.47■□□□□ 0.23
PRRC2B-207ENST00000458550 NR2E3Q9Y5X4 410 aa16.47■□□□□ 0.23
PRRC2B-207ENST00000458550 NDUFB9Q9Y6M9 179 aa16.47■□□□□ 0.23
PRRC2B-207ENST00000458550 JAG1P78504 1218 aa16.46■□□□□ 0.23
PRRC2B-207ENST00000458550 TTF1Q15361 905 aaPredicted RBP16.46■□□□□ 0.23
PRRC2B-207ENST00000458550 TTC6Q86TZ1 520 aa16.46■□□□□ 0.23
PRRC2B-207ENST00000458550 GPRC5AQ8NFJ5 357 aa16.46■□□□□ 0.23
PRRC2B-207ENST00000458550 IL1RAPL2Q9NP60 686 aa16.46■□□□□ 0.23
PRRC2B-207ENST00000458550 APBB1O00213 710 aa16.45■□□□□ 0.22
PRRC2B-207ENST00000458550 HMMRO75330 724 aa16.45■□□□□ 0.22
PRRC2B-207ENST00000458550 GH2P01242 217 aa16.45■□□□□ 0.22
PRRC2B-207ENST00000458550 USP17L2Q6R6M4 530 aa16.45■□□□□ 0.22
PRRC2B-207ENST00000458550 UBE2Q1Q7Z7E8 422 aa16.45■□□□□ 0.22
PRRC2B-207ENST00000458550 CLASRPQ8N2M8 674 aaKnown RBP16.45■□□□□ 0.22
PRRC2B-207ENST00000458550 ANTXR1Q9H6X2 564 aa16.45■□□□□ 0.22
PRRC2B-207ENST00000458550 MORF4L1Q9UBU8 362 aa16.45■□□□□ 0.22
PRRC2B-207ENST00000458550 SERPINB13Q9UIV8 391 aa16.45■□□□□ 0.22
PRRC2B-207ENST00000458550 HMGCRP04035 888 aa16.44■□□□□ 0.22
PRRC2B-207ENST00000458550 POLR3DP05423 398 aaPredicted RBP16.44■□□□□ 0.22
PRRC2B-207ENST00000458550 HERVK_113P62684 666 aa16.44■□□□□ 0.22
PRRC2B-207ENST00000458550 SHROOM1Q2M3G4 852 aaPredicted RBP16.44■□□□□ 0.22
PRRC2B-207ENST00000458550 CHRDL2Q6WN34 429 aa16.44■□□□□ 0.22
PRRC2B-207ENST00000458550 RHPN1Q8TCX5 695 aa16.44■□□□□ 0.22
PRRC2B-207ENST00000458550 FEZ1Q99689 392 aa16.44■□□□□ 0.22
PRRC2B-207ENST00000458550 NUDT12Q9BQG2 462 aa16.44■□□□□ 0.22
PRRC2B-207ENST00000458550 CWC22Q9HCG8 908 aaKnown RBP16.44■□□□□ 0.22
PRRC2B-207ENST00000458550 CABP5Q9NP86 173 aa16.44■□□□□ 0.22
PRRC2B-207ENST00000458550 PAK6Q9NQU5 681 aaPredicted RBP16.44■□□□□ 0.22
PRRC2B-207ENST00000458550 GJD2Q9UKL4 321 aa16.44■□□□□ 0.22
PRRC2B-207ENST00000458550 MAGEB6P1A0A0J9YX57 407 aa16.43■□□□□ 0.22
PRRC2B-207ENST00000458550 EVI5O60447 810 aa16.43■□□□□ 0.22
PRRC2B-207ENST00000458550 IFIT2P09913 472 aaKnown RBP16.43■□□□□ 0.22
PRRC2B-207ENST00000458550 CYP2B6P20813 491 aa16.43■□□□□ 0.22
PRRC2B-207ENST00000458550 FXR1P51114 621 aaKnown RBP eCLIP16.43■□□□□ 0.22
PRRC2B-207ENST00000458550 PDE3AQ14432 1141 aa16.43■□□□□ 0.22
PRRC2B-207ENST00000458550 RAB3GAP1Q15042 981 aa16.43■□□□□ 0.22
PRRC2B-207ENST00000458550 CERKLQ49MI3 558 aaPredicted RBP16.43■□□□□ 0.22
PRRC2B-207ENST00000458550 TATDN1Q6P1N9 297 aa16.43■□□□□ 0.22
PRRC2B-207ENST00000458550 RPAP2Q8IXW5 612 aaPredicted RBP16.43■□□□□ 0.22
PRRC2B-207ENST00000458550 GTF3C2Q8WUA4 911 aaPredicted RBP16.43■□□□□ 0.22
PRRC2B-207ENST00000458550 KIF1BPQ96EK5 621 aa16.43■□□□□ 0.22
PRRC2B-207ENST00000458550 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.43■□□□□ 0.22
PRRC2B-207ENST00000458550 EHD4Q9H223 541 aa16.43■□□□□ 0.22
PRRC2B-207ENST00000458550 CHMP4BQ9H444 224 aaKnown RBP16.43■□□□□ 0.22
PRRC2B-207ENST00000458550 HMX1Q9NP08 348 aaPredicted RBP16.43■□□□□ 0.22
PRRC2B-207ENST00000458550 DDX19BQ9UMR2 479 aa16.43■□□□□ 0.22
PRRC2B-207ENST00000458550 RPTORQ8N122 1335 aa16.43■□□□□ 0.22
PRRC2B-207ENST00000458550 MAPK4P31152 587 aa16.42■□□□□ 0.22
PRRC2B-207ENST00000458550 USP14P54578 494 aa16.42■□□□□ 0.22
PRRC2B-207ENST00000458550 ZYXQ15942 572 aaKnown RBP16.42■□□□□ 0.22
PRRC2B-207ENST00000458550 ABCB5Q2M3G0 1257 aa16.42■□□□□ 0.22
PRRC2B-207ENST00000458550 SLC9C2Q5TAH2 1124 aa16.42■□□□□ 0.22
PRRC2B-207ENST00000458550 DNAJC2Q99543 621 aaKnown RBP16.42■□□□□ 0.22
PRRC2B-207ENST00000458550 PAGR1Q9BTK6 254 aa16.42■□□□□ 0.22
PRRC2B-207ENST00000458550 CRNKL1Q9BZJ0 848 aaKnown RBP16.42■□□□□ 0.22
PRRC2B-207ENST00000458550 EMILIN3Q9NT22 766 aa16.42■□□□□ 0.22
PRRC2B-207ENST00000458550 PLXNB2O15031 1838 aa16.41■□□□□ 0.22
PRRC2B-207ENST00000458550 USP17L15C9J2P7 530 aa16.41■□□□□ 0.22
PRRC2B-207ENST00000458550 USP17L13C9JLJ4 530 aa16.41■□□□□ 0.22
PRRC2B-207ENST00000458550 USP17L11C9JVI0 530 aa16.41■□□□□ 0.22
PRRC2B-207ENST00000458550 USP17L18D6R9N7 530 aa16.41■□□□□ 0.22
PRRC2B-207ENST00000458550 USP17L22D6RA61 530 aa16.41■□□□□ 0.22
PRRC2B-207ENST00000458550 USP17L17D6RBQ6 530 aa16.41■□□□□ 0.22
PRRC2B-207ENST00000458550 USP17L19D6RCP7 530 aa16.41■□□□□ 0.22
PRRC2B-207ENST00000458550 USP17L20D6RJB6 530 aa16.41■□□□□ 0.22
PRRC2B-207ENST00000458550 ERVK-9P63128 1117 aa16.41■□□□□ 0.22
PRRC2B-207ENST00000458550 ERVK-24P63145 666 aa16.41■□□□□ 0.22
PRRC2B-207ENST00000458550 USP17L24Q0WX57 530 aa16.41■□□□□ 0.22
PRRC2B-207ENST00000458550 NECAB2Q7Z6G3 386 aa16.41■□□□□ 0.22
PRRC2B-207ENST00000458550 SOCS4Q8WXH5 440 aa16.41■□□□□ 0.22
PRRC2B-207ENST00000458550 PAWRQ96IZ0 340 aaKnown RBP16.41■□□□□ 0.22
PRRC2B-207ENST00000458550 CRISPLD2Q9H0B8 497 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms