RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 FUT2Q10981 343 aa18.99■□□□□ 0.63
CAPN13-203ENST00000458085 DEFB132Q7Z7B7 95 aa18.99■□□□□ 0.63
CAPN13-203ENST00000458085 LINC00301Q8NCQ3 95 aa18.99■□□□□ 0.63
CAPN13-203ENST00000458085 SHISA4Q96DD7 197 aa18.99■□□□□ 0.63
CAPN13-203ENST00000458085 IL17RBQ9NRM6 502 aa18.99■□□□□ 0.63
CAPN13-203ENST00000458085 KCNJ14Q9UNX9 436 aa18.99■□□□□ 0.63
CAPN13-203ENST00000458085 MYH6P13533 1939 aa18.99■□□□□ 0.63
CAPN13-203ENST00000458085 DDX60LQ5H9U9 1706 aaKnown RBP18.98■□□□□ 0.63
CAPN13-203ENST00000458085 FLT1P17948 1338 aa18.98■□□□□ 0.63
CAPN13-203ENST00000458085 hCG_1642624A0A1W2PR95 340 aa18.98■□□□□ 0.63
CAPN13-203ENST00000458085 LETM1O95202 739 aaPredicted RBP18.98■□□□□ 0.63
CAPN13-203ENST00000458085 TRIM22Q8IYM9 498 aa18.98■□□□□ 0.63
CAPN13-203ENST00000458085 RGS22Q8NE09 1264 aa18.98■□□□□ 0.63
CAPN13-203ENST00000458085 NUP62CLQ9H1M0 184 aa18.98■□□□□ 0.63
CAPN13-203ENST00000458085 DBNDD1Q9H9R9 158 aa18.98■□□□□ 0.63
CAPN13-203ENST00000458085 BAZ2BQ9UIF8 2168 aaKnown RBP18.98■□□□□ 0.63
CAPN13-203ENST00000458085 STYK1Q6J9G0 422 aa18.98■□□□□ 0.63
CAPN13-203ENST00000458085 PCDHA7Q9UN72 937 aa18.98■□□□□ 0.63
CAPN13-203ENST00000458085 ME1P48163 572 aa18.97■□□□□ 0.63
CAPN13-203ENST00000458085 CCAR1Q8IX12 1150 aaKnown RBP18.97■□□□□ 0.63
CAPN13-203ENST00000458085 POLR3EQ9NVU0 708 aa18.97■□□□□ 0.63
CAPN13-203ENST00000458085 ADAMTSL1Q8N6G6 1762 aa18.97■□□□□ 0.63
CAPN13-203ENST00000458085 USP17L3A6NCW0 530 aa18.97■□□□□ 0.63
CAPN13-203ENST00000458085 USP17L4A6NCW7 530 aa18.97■□□□□ 0.63
CAPN13-203ENST00000458085 DEXIO95424 95 aa18.97■□□□□ 0.63
CAPN13-203ENST00000458085 U2AF2P26368 475 aaKnown RBP eCLIP18.97■□□□□ 0.63
CAPN13-203ENST00000458085 TRIM29Q14134 588 aa18.97■□□□□ 0.63
CAPN13-203ENST00000458085 USP17L1Q7RTZ2 530 aa18.97■□□□□ 0.63
CAPN13-203ENST00000458085 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.97■□□□□ 0.63
CAPN13-203ENST00000458085 MKNK2Q9HBH9 465 aa18.97■□□□□ 0.63
CAPN13-203ENST00000458085 MYH1P12882 1939 aa18.96■□□□□ 0.63
CAPN13-203ENST00000458085 SCNN1DP51172 638 aa18.96■□□□□ 0.63
CAPN13-203ENST00000458085 PKN1Q16512 942 aa18.96■□□□□ 0.63
CAPN13-203ENST00000458085 SLF2Q8IX21 1173 aa18.96■□□□□ 0.63
CAPN13-203ENST00000458085 CKAP2LQ8IYA6 745 aa18.96■□□□□ 0.63
CAPN13-203ENST00000458085 WASF1Q92558 559 aa18.96■□□□□ 0.63
CAPN13-203ENST00000458085 TMX4Q9H1E5 349 aaPredicted RBP18.96■□□□□ 0.63
CAPN13-203ENST00000458085 CLSTN2Q9H4D0 955 aa18.96■□□□□ 0.63
CAPN13-203ENST00000458085 TTF2Q9UNY4 1162 aaKnown RBP18.96■□□□□ 0.63
CAPN13-203ENST00000458085 BTBD18B2RXH4 712 aa18.95■□□□□ 0.62
CAPN13-203ENST00000458085 DDAH1O94760 285 aa18.95■□□□□ 0.62
CAPN13-203ENST00000458085 MMP1P03956 469 aa18.95■□□□□ 0.62
CAPN13-203ENST00000458085 STK38Q15208 465 aa18.95■□□□□ 0.62
CAPN13-203ENST00000458085 ANO1Q5XXA6 986 aa18.95■□□□□ 0.62
CAPN13-203ENST00000458085 DDX19AQ9NUU7 478 aaKnown RBP18.95■□□□□ 0.62
CAPN13-203ENST00000458085 PLCG2P16885 1265 aa18.95■□□□□ 0.62
CAPN13-203ENST00000458085 RASA1P20936 1047 aa18.95■□□□□ 0.62
CAPN13-203ENST00000458085 PPP2R5BQ15173 497 aa18.95■□□□□ 0.62
CAPN13-203ENST00000458085 CERS3Q8IU89 383 aa18.95■□□□□ 0.62
CAPN13-203ENST00000458085 AMOTL1Q8IY63 956 aa18.95■□□□□ 0.62
CAPN13-203ENST00000458085 RNF26Q9BY78 433 aaPredicted RBP18.95■□□□□ 0.62
CAPN13-203ENST00000458085 TNMDQ9H2S6 317 aa18.95■□□□□ 0.62
CAPN13-203ENST00000458085 SCN9AQ15858 1988 aa18.95■□□□□ 0.62
CAPN13-203ENST00000458085 QSER1Q2KHR3 1735 aa18.95■□□□□ 0.62
CAPN13-203ENST00000458085 G3V3G9 751 aa18.94■□□□□ 0.62
CAPN13-203ENST00000458085 YEATS4O95619 227 aa18.94■□□□□ 0.62
CAPN13-203ENST00000458085 SNW1Q13573 536 aaKnown RBP18.94■□□□□ 0.62
CAPN13-203ENST00000458085 GNL2Q13823 731 aaKnown RBP18.94■□□□□ 0.62
CAPN13-203ENST00000458085 MAP3K11Q16584 847 aa18.94■□□□□ 0.62
CAPN13-203ENST00000458085 DCAF8Q5TAQ9 597 aa18.94■□□□□ 0.62
CAPN13-203ENST00000458085 TMTC3Q6ZXV5 915 aa18.94■□□□□ 0.62
CAPN13-203ENST00000458085 SRBD1Q8N5C6 995 aaKnown RBP18.94■□□□□ 0.62
CAPN13-203ENST00000458085 C7orf43Q8WVR3 580 aa18.94■□□□□ 0.62
CAPN13-203ENST00000458085 EYA3Q99504 573 aa18.94■□□□□ 0.62
CAPN13-203ENST00000458085 V9GY48 417 aaPredicted RBP18.94■□□□□ 0.62
CAPN13-203ENST00000458085 FOCADQ5VW36 1801 aa18.94■□□□□ 0.62
CAPN13-203ENST00000458085 SPTLC2O15270 562 aa18.94■□□□□ 0.62
CAPN13-203ENST00000458085 SF3A1Q15459 793 aaKnown RBP18.94■□□□□ 0.62
CAPN13-203ENST00000458085 DIS3L2Q8IYB7 885 aaKnown RBP18.94■□□□□ 0.62
CAPN13-203ENST00000458085 RBM28Q9NW13 759 aaKnown RBP18.94■□□□□ 0.62
CAPN13-203ENST00000458085 SNED1Q8TER0 1413 aa18.93■□□□□ 0.62
CAPN13-203ENST00000458085 CALM1P0DP23 149 aa18.93■□□□□ 0.62
CAPN13-203ENST00000458085 CALM2P0DP24 149 aa18.93■□□□□ 0.62
CAPN13-203ENST00000458085 CALM3P0DP25 149 aa18.93■□□□□ 0.62
CAPN13-203ENST00000458085 CDK8P49336 464 aa18.93■□□□□ 0.62
CAPN13-203ENST00000458085 NR5A1Q13285 461 aa18.93■□□□□ 0.62
CAPN13-203ENST00000458085 PICALMQ13492 652 aa18.93■□□□□ 0.62
CAPN13-203ENST00000458085 C16orf86Q6ZW13 317 aa18.93■□□□□ 0.62
CAPN13-203ENST00000458085 FSIP1Q8NA03 581 aa18.93■□□□□ 0.62
CAPN13-203ENST00000458085 ENGASEQ8NFI3 743 aa18.93■□□□□ 0.62
CAPN13-203ENST00000458085 OXER1Q8TDS5 423 aa18.93■□□□□ 0.62
CAPN13-203ENST00000458085 PPP1R9BQ96SB3 815 aa18.93■□□□□ 0.62
CAPN13-203ENST00000458085 DDX4Q9NQI0 724 aaKnown RBP18.93■□□□□ 0.62
CAPN13-203ENST00000458085 VPS54Q9P1Q0 977 aa18.93■□□□□ 0.62
CAPN13-203ENST00000458085 SUGT1Q9Y2Z0 365 aa18.93■□□□□ 0.62
CAPN13-203ENST00000458085 CNTNAP5Q8WYK1 1306 aa18.93■□□□□ 0.62
CAPN13-203ENST00000458085 PRPF3O43395 683 aaKnown RBP18.93■□□□□ 0.62
CAPN13-203ENST00000458085 TSPY3P0CV98 308 aa18.93■□□□□ 0.62
CAPN13-203ENST00000458085 TSPY8P0CW00 308 aa18.93■□□□□ 0.62
CAPN13-203ENST00000458085 RBM43Q6ZSC3 357 aaKnown RBP18.93■□□□□ 0.62
CAPN13-203ENST00000458085 MARCKSP29966 332 aaPredicted RBP18.92■□□□□ 0.62
CAPN13-203ENST00000458085 ADALQ6DHV7 355 aa18.92■□□□□ 0.62
CAPN13-203ENST00000458085 NOSTRINQ8IVI9 506 aa18.92■□□□□ 0.62
CAPN13-203ENST00000458085 ZNF444Q8N0Y2 327 aaPredicted RBP18.92■□□□□ 0.62
CAPN13-203ENST00000458085 CTCFLQ8NI51 663 aaPredicted RBP18.92■□□□□ 0.62
CAPN13-203ENST00000458085 KCNG4Q8TDN1 519 aa18.92■□□□□ 0.62
CAPN13-203ENST00000458085 MAP3K14Q99558 947 aa18.92■□□□□ 0.62
CAPN13-203ENST00000458085 A0A1B0GVL5 298 aa18.91■□□□□ 0.62
CAPN13-203ENST00000458085 WDHD1O75717 1129 aaPredicted RBP18.91■□□□□ 0.62
CAPN13-203ENST00000458085 CCDC173Q0VFZ6 552 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms