RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 MAP2K2P36507 400 aa16.85■□□□□ 0.29
SMPD4-215ENST00000457039 PPIL2Q13356 520 aa16.85■□□□□ 0.29
SMPD4-215ENST00000457039 JMYQ8N9B5 988 aa16.85■□□□□ 0.29
SMPD4-215ENST00000457039 GINM1Q9NU53 330 aa16.85■□□□□ 0.29
SMPD4-215ENST00000457039 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.85■□□□□ 0.29
SMPD4-215ENST00000457039 ANAPC4Q9UJX5 808 aa16.85■□□□□ 0.29
SMPD4-215ENST00000457039 PCNTO95613 3336 aa16.85■□□□□ 0.29
SMPD4-215ENST00000457039 ATAD5Q96QE3 1844 aa16.84■□□□□ 0.29
SMPD4-215ENST00000457039 ASNSP08243 561 aa16.84■□□□□ 0.29
SMPD4-215ENST00000457039 KIF23Q02241 960 aaPredicted RBP16.84■□□□□ 0.29
SMPD4-215ENST00000457039 CERKLQ49MI3 558 aaPredicted RBP16.84■□□□□ 0.29
SMPD4-215ENST00000457039 OTUD5Q96G74 571 aa16.84■□□□□ 0.29
SMPD4-215ENST00000457039 PICK1Q9NRD5 415 aa16.84■□□□□ 0.29
SMPD4-215ENST00000457039 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.84■□□□□ 0.29
SMPD4-215ENST00000457039 ZBTB21Q9ULJ3 1066 aa16.84■□□□□ 0.29
SMPD4-215ENST00000457039 GTF3C3Q9Y5Q9 886 aa16.84■□□□□ 0.29
SMPD4-215ENST00000457039 PHIPQ8WWQ0 1821 aa16.84■□□□□ 0.29
SMPD4-215ENST00000457039 IRF6O14896 467 aa16.83■□□□□ 0.28
SMPD4-215ENST00000457039 GUCY1A2P33402 732 aa16.83■□□□□ 0.28
SMPD4-215ENST00000457039 PTH1RQ03431 593 aa16.83■□□□□ 0.28
SMPD4-215ENST00000457039 MKRN3Q13064 507 aaKnown RBP16.83■□□□□ 0.28
SMPD4-215ENST00000457039 CCDC84Q86UT8 332 aaPredicted RBP16.83■□□□□ 0.28
SMPD4-215ENST00000457039 MS4A4AQ96JQ5 239 aa16.83■□□□□ 0.28
SMPD4-215ENST00000457039 KCNH4Q9UQ05 1017 aa16.83■□□□□ 0.28
SMPD4-215ENST00000457039 AFG3L2Q9Y4W6 797 aa16.83■□□□□ 0.28
SMPD4-215ENST00000457039 TACC3Q9Y6A5 838 aa16.83■□□□□ 0.28
SMPD4-215ENST00000457039 GH2P01242 217 aa16.82■□□□□ 0.28
SMPD4-215ENST00000457039 FGRP09769 529 aa16.82■□□□□ 0.28
SMPD4-215ENST00000457039 AKR1B1P15121 316 aa16.82■□□□□ 0.28
SMPD4-215ENST00000457039 RASA1P20936 1047 aa16.82■□□□□ 0.28
SMPD4-215ENST00000457039 ABCB5Q2M3G0 1257 aa16.82■□□□□ 0.28
SMPD4-215ENST00000457039 CCDC17Q96LX7 622 aa16.82■□□□□ 0.28
SMPD4-215ENST00000457039 LSG1Q9H089 658 aaKnown RBP16.82■□□□□ 0.28
SMPD4-215ENST00000457039 NBPF3Q9H094 633 aa16.82■□□□□ 0.28
SMPD4-215ENST00000457039 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.82■□□□□ 0.28
SMPD4-215ENST00000457039 ZHX2Q9Y6X8 837 aa16.82■□□□□ 0.28
SMPD4-215ENST00000457039 TESPA1A2RU30 521 aaPredicted RBP16.81■□□□□ 0.28
SMPD4-215ENST00000457039 USP17L5A8MUK1 530 aa16.81■□□□□ 0.28
SMPD4-215ENST00000457039 CTDSPL2Q05D32 466 aa16.81■□□□□ 0.28
SMPD4-215ENST00000457039 REM2Q8IYK8 340 aaPredicted RBP16.81■□□□□ 0.28
SMPD4-215ENST00000457039 STK11IPQ8N1F8 1099 aa16.81■□□□□ 0.28
SMPD4-215ENST00000457039 MAP4K1Q92918 833 aa16.81■□□□□ 0.28
SMPD4-215ENST00000457039 TBC1D2Q9BYX2 928 aa16.81■□□□□ 0.28
SMPD4-215ENST00000457039 LAMA4Q16363 1823 aa16.81■□□□□ 0.28
SMPD4-215ENST00000457039 MYH8P13535 1937 aa16.8■□□□□ 0.28
SMPD4-215ENST00000457039 MANSC4A6NHS7 340 aaPredicted RBP16.8■□□□□ 0.28
SMPD4-215ENST00000457039 CXCL11O14625 94 aa16.8■□□□□ 0.28
SMPD4-215ENST00000457039 PRDM1O75626 825 aa16.8■□□□□ 0.28
SMPD4-215ENST00000457039 SLC3A2P08195 630 aaKnown RBP16.8■□□□□ 0.28
SMPD4-215ENST00000457039 TM4SF4P48230 202 aa16.8■□□□□ 0.28
SMPD4-215ENST00000457039 GTF2A2P52657 109 aa16.8■□□□□ 0.28
SMPD4-215ENST00000457039 HAND2P61296 217 aa16.8■□□□□ 0.28
SMPD4-215ENST00000457039 PDE4BQ07343 736 aa16.8■□□□□ 0.28
SMPD4-215ENST00000457039 CASC1Q6TDU7 716 aa16.8■□□□□ 0.28
SMPD4-215ENST00000457039 TMEM179Q6ZVK1 233 aa16.8■□□□□ 0.28
SMPD4-215ENST00000457039 WDR18Q9BV38 432 aa16.8■□□□□ 0.28
SMPD4-215ENST00000457039 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.8■□□□□ 0.28
SMPD4-215ENST00000457039 ZNF287Q9HBT7 754 aa16.8■□□□□ 0.28
SMPD4-215ENST00000457039 CTNNA3Q9UI47 895 aa16.8■□□□□ 0.28
SMPD4-215ENST00000457039 GREB1LQ9C091 1923 aaPredicted RBP16.8■□□□□ 0.28
SMPD4-215ENST00000457039 MOGSQ13724 837 aa16.79■□□□□ 0.28
SMPD4-215ENST00000457039 SEPT2Q15019 361 aa16.79■□□□□ 0.28
SMPD4-215ENST00000457039 TBC1D10CQ8IV04 446 aa16.79■□□□□ 0.28
SMPD4-215ENST00000457039 ZNF280CQ8ND82 737 aa16.79■□□□□ 0.28
SMPD4-215ENST00000457039 BRI3BPQ8WY22 251 aa16.79■□□□□ 0.28
SMPD4-215ENST00000457039 MKNK2Q9HBH9 465 aa16.79■□□□□ 0.28
SMPD4-215ENST00000457039 CABP5Q9NP86 173 aa16.79■□□□□ 0.28
SMPD4-215ENST00000457039 INCENPQ9NQS7 918 aa16.79■□□□□ 0.28
SMPD4-215ENST00000457039 U3KPZ7 1027 aaPredicted RBP16.79■□□□□ 0.28
SMPD4-215ENST00000457039 PLIN4Q96Q06 1357 aa16.78■□□□□ 0.28
SMPD4-215ENST00000457039 A0A0G2JLL6 359 aaPredicted RBP16.78■□□□□ 0.28
SMPD4-215ENST00000457039 ZNF213O14771 459 aa16.78■□□□□ 0.28
SMPD4-215ENST00000457039 ORC4O43929 436 aa16.78■□□□□ 0.28
SMPD4-215ENST00000457039 INHBEP58166 350 aa16.78■□□□□ 0.28
SMPD4-215ENST00000457039 SREBF2Q12772 1141 aa16.78■□□□□ 0.28
SMPD4-215ENST00000457039 SPP2Q13103 211 aa16.78■□□□□ 0.28
SMPD4-215ENST00000457039 SNAPC2Q13487 334 aa16.78■□□□□ 0.28
SMPD4-215ENST00000457039 IMMTQ16891 758 aaKnown RBP16.78■□□□□ 0.28
SMPD4-215ENST00000457039 AKNAD1Q5T1N1 836 aa16.78■□□□□ 0.28
SMPD4-215ENST00000457039 PRRT2Q7Z6L0 340 aaPredicted RBP16.78■□□□□ 0.28
SMPD4-215ENST00000457039 STAG1Q8WVM7 1258 aa16.78■□□□□ 0.28
SMPD4-215ENST00000457039 PTPN18Q99952 460 aa16.78■□□□□ 0.28
SMPD4-215ENST00000457039 AS3MTQ9HBK9 375 aa16.78■□□□□ 0.28
SMPD4-215ENST00000457039 PTPRFP10586 1907 aa16.77■□□□□ 0.28
SMPD4-215ENST00000457039 CCL15-CCL14A0A0B4J2E2 113 aa16.77■□□□□ 0.28
SMPD4-215ENST00000457039 IGKV6D-41A0A0C4DH26 115 aa16.77■□□□□ 0.28
SMPD4-215ENST00000457039 TRIM75PA6NK02 468 aa16.77■□□□□ 0.28
SMPD4-215ENST00000457039 MPHOSPH10O00566 681 aaKnown RBP16.77■□□□□ 0.28
SMPD4-215ENST00000457039 PCP11498 1178 aaKnown RBP16.77■□□□□ 0.28
SMPD4-215ENST00000457039 CETPP11597 493 aa16.77■□□□□ 0.28
SMPD4-215ENST00000457039 MAP2K1Q02750 393 aaPredicted RBP16.77■□□□□ 0.28
SMPD4-215ENST00000457039 RAB3GAP1Q15042 981 aa16.77■□□□□ 0.28
SMPD4-215ENST00000457039 CCL15Q16663 113 aa16.77■□□□□ 0.28
SMPD4-215ENST00000457039 KIAA1211Q6ZU35 1233 aa16.77■□□□□ 0.28
SMPD4-215ENST00000457039 SIAH1Q8IUQ4 282 aa16.77■□□□□ 0.28
SMPD4-215ENST00000457039 ZNF444Q8N0Y2 327 aaPredicted RBP16.77■□□□□ 0.28
SMPD4-215ENST00000457039 ANO2Q9NQ90 1003 aa16.77■□□□□ 0.28
SMPD4-215ENST00000457039 WBP1LQ9NX94 342 aa16.77■□□□□ 0.28
SMPD4-215ENST00000457039 RBM8AQ9Y5S9 174 aaKnown RBP16.77■□□□□ 0.28
SMPD4-215ENST00000457039 IGF2BP3O00425 579 aaKnown RBP eCLIP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms