RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 USP17L12C9JPN9 530 aa12.05□□□□□ -0.48
ATG4A-206ENST00000457035 USP17L21D6R901 530 aa12.05□□□□□ -0.48
ATG4A-206ENST00000457035 SMIM22K7EJ46 135 aa12.05□□□□□ -0.48
ATG4A-206ENST00000457035 HIP1O00291 1037 aa12.05□□□□□ -0.48
ATG4A-206ENST00000457035 FOXP2O15409 715 aa12.05□□□□□ -0.48
ATG4A-206ENST00000457035 POLR3DP05423 398 aaPredicted RBP12.05□□□□□ -0.48
ATG4A-206ENST00000457035 HLA-DOAP06340 250 aa12.05□□□□□ -0.48
ATG4A-206ENST00000457035 SLC10A3P09131 477 aa12.05□□□□□ -0.48
ATG4A-206ENST00000457035 CYP2D6P10635 497 aa12.05□□□□□ -0.48
ATG4A-206ENST00000457035 MAP2K2P36507 400 aa12.05□□□□□ -0.48
ATG4A-206ENST00000457035 GABPAQ06546 454 aa12.05□□□□□ -0.48
ATG4A-206ENST00000457035 VGLL4Q14135 290 aa12.05□□□□□ -0.48
ATG4A-206ENST00000457035 RRP1BQ14684 758 aaKnown RBP12.05□□□□□ -0.48
ATG4A-206ENST00000457035 SLC4A8Q2Y0W8 1093 aa12.05□□□□□ -0.48
ATG4A-206ENST00000457035 CTR9Q6PD62 1173 aa12.05□□□□□ -0.48
ATG4A-206ENST00000457035 ZNF589Q86UQ0 364 aaPredicted RBP12.05□□□□□ -0.48
ATG4A-206ENST00000457035 RASAL3Q86YV0 1011 aa12.05□□□□□ -0.48
ATG4A-206ENST00000457035 IFNL3Q8IZI9 196 aa12.05□□□□□ -0.48
ATG4A-206ENST00000457035 ZIC5Q96T25 663 aa12.05□□□□□ -0.48
ATG4A-206ENST00000457035 EHD4Q9H223 541 aa12.05□□□□□ -0.48
ATG4A-206ENST00000457035 EPB41L4AQ9HCS5 686 aaPredicted RBP12.05□□□□□ -0.48
ATG4A-206ENST00000457035 MYH8P13535 1937 aa12.05□□□□□ -0.48
ATG4A-206ENST00000457035 CCDC85CA6NKD9 419 aa12.04□□□□□ -0.48
ATG4A-206ENST00000457035 CTNND1O60716 968 aaKnown RBP12.04□□□□□ -0.48
ATG4A-206ENST00000457035 CHMLP26374 656 aa12.04□□□□□ -0.48
ATG4A-206ENST00000457035 SBK1Q52WX2 424 aa12.04□□□□□ -0.48
ATG4A-206ENST00000457035 BMP2KLQ5H9B9 411 aa12.04□□□□□ -0.48
ATG4A-206ENST00000457035 NOL9Q5SY16 702 aaKnown RBP12.04□□□□□ -0.48
ATG4A-206ENST00000457035 C12orf60Q5U649 245 aa12.04□□□□□ -0.48
ATG4A-206ENST00000457035 VPS53Q5VIR6 699 aa12.04□□□□□ -0.48
ATG4A-206ENST00000457035 SPRYD7Q5W111 196 aa12.04□□□□□ -0.48
ATG4A-206ENST00000457035 CWC27Q6UX04 472 aaKnown RBP12.04□□□□□ -0.48
ATG4A-206ENST00000457035 DIAPH3Q9NSV4 1193 aa12.04□□□□□ -0.48
ATG4A-206ENST00000457035 SERPINB13Q9UIV8 391 aa12.04□□□□□ -0.48
ATG4A-206ENST00000457035 SNCAIPQ9Y6H5 919 aa12.04□□□□□ -0.48
ATG4A-206ENST00000457035 PHIPQ8WWQ0 1821 aa12.04□□□□□ -0.48
ATG4A-206ENST00000457035 ATAD5Q96QE3 1844 aa12.04□□□□□ -0.48
ATG4A-206ENST00000457035 CYP2D7A0A087X1C5 515 aa12.03□□□□□ -0.48
ATG4A-206ENST00000457035 TTLL13PA6NNM8 815 aa12.03□□□□□ -0.48
ATG4A-206ENST00000457035 APPP05067 770 aa12.03□□□□□ -0.48
ATG4A-206ENST00000457035 HSPD1P10809 573 aaKnown RBP12.03□□□□□ -0.48
ATG4A-206ENST00000457035 GJA5P36382 358 aa12.03□□□□□ -0.48
ATG4A-206ENST00000457035 CAP2P40123 477 aa12.03□□□□□ -0.48
ATG4A-206ENST00000457035 ALX1Q15699 326 aa12.03□□□□□ -0.48
ATG4A-206ENST00000457035 TATDN1Q6P1N9 297 aa12.03□□□□□ -0.48
ATG4A-206ENST00000457035 DDRGK1Q96HY6 314 aa12.03□□□□□ -0.48
ATG4A-206ENST00000457035 IL25Q9H293 177 aa12.03□□□□□ -0.48
ATG4A-206ENST00000457035 ELP3Q9H9T3 547 aa12.03□□□□□ -0.48
ATG4A-206ENST00000457035 CSADQ9Y600 493 aa12.03□□□□□ -0.48
ATG4A-206ENST00000457035 DOCK1Q14185 1865 aa12.02□□□□□ -0.48
ATG4A-206ENST00000457035 C7P10643 843 aa12.02□□□□□ -0.49
ATG4A-206ENST00000457035 SHMT1P34896 483 aa12.02□□□□□ -0.49
ATG4A-206ENST00000457035 JAG1P78504 1218 aa12.02□□□□□ -0.49
ATG4A-206ENST00000457035 NOGQ13253 232 aa12.02□□□□□ -0.49
ATG4A-206ENST00000457035 ERO1BQ86YB8 467 aa12.02□□□□□ -0.49
ATG4A-206ENST00000457035 CRACR2BQ8N4Y2 399 aaPredicted RBP12.02□□□□□ -0.49
ATG4A-206ENST00000457035 SLC39A7Q92504 469 aa12.02□□□□□ -0.49
ATG4A-206ENST00000457035 OPTNQ96CV9 577 aa12.02□□□□□ -0.49
ATG4A-206ENST00000457035 DYNLL2Q96FJ2 89 aa12.02□□□□□ -0.49
ATG4A-206ENST00000457035 WNK4Q96J92 1243 aa12.02□□□□□ -0.49
ATG4A-206ENST00000457035 NACAP1Q9BZK3 213 aa12.02□□□□□ -0.49
ATG4A-206ENST00000457035 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.02□□□□□ -0.49
ATG4A-206ENST00000457035 TAOK2Q9UL54 1235 aa12.02□□□□□ -0.49
ATG4A-206ENST00000457035 PCDHB8Q9UN66 801 aa12.02□□□□□ -0.49
ATG4A-206ENST00000457035 CCDC171Q6TFL3 1326 aa12.02□□□□□ -0.49
ATG4A-206ENST00000457035 PTPRFP10586 1907 aa12.01□□□□□ -0.49
ATG4A-206ENST00000457035 LAMB1P07942 1786 aa12.01□□□□□ -0.49
ATG4A-206ENST00000457035 SPDYE5A6NIY4 337 aa12.01□□□□□ -0.49
ATG4A-206ENST00000457035 MINDY4BA8MYZ0 360 aa12.01□□□□□ -0.49
ATG4A-206ENST00000457035 CA12O43570 354 aa12.01□□□□□ -0.49
ATG4A-206ENST00000457035 FGAP02671 866 aa12.01□□□□□ -0.49
ATG4A-206ENST00000457035 ZBTB48P10074 688 aaPredicted RBP12.01□□□□□ -0.49
ATG4A-206ENST00000457035 PTPRAP18433 802 aa12.01□□□□□ -0.49
ATG4A-206ENST00000457035 KIF23Q02241 960 aaPredicted RBP12.01□□□□□ -0.49
ATG4A-206ENST00000457035 PPATQ06203 517 aa12.01□□□□□ -0.49
ATG4A-206ENST00000457035 SCYL3Q8IZE3 742 aa12.01□□□□□ -0.49
ATG4A-206ENST00000457035 ARPP21Q9UBL0 812 aaPredicted RBP12.01□□□□□ -0.49
ATG4A-206ENST00000457035 IRF6O14896 467 aa12□□□□□ -0.49
ATG4A-206ENST00000457035 TM4SF4P48230 202 aa12□□□□□ -0.49
ATG4A-206ENST00000457035 TDO2P48775 406 aa12□□□□□ -0.49
ATG4A-206ENST00000457035 CDK8P49336 464 aa12□□□□□ -0.49
ATG4A-206ENST00000457035 MFAP1P55081 439 aaKnown RBP12□□□□□ -0.49
ATG4A-206ENST00000457035 MKRN3Q13064 507 aaKnown RBP12□□□□□ -0.49
ATG4A-206ENST00000457035 SHROOM1Q2M3G4 852 aaPredicted RBP12□□□□□ -0.49
ATG4A-206ENST00000457035 CERKLQ49MI3 558 aaPredicted RBP12□□□□□ -0.49
ATG4A-206ENST00000457035 C16orf86Q6ZW13 317 aa12□□□□□ -0.49
ATG4A-206ENST00000457035 ZNF467Q7Z7K2 595 aaPredicted RBP12□□□□□ -0.49
ATG4A-206ENST00000457035 AMOTL1Q8IY63 956 aa12□□□□□ -0.49
ATG4A-206ENST00000457035 SLC44A5Q8NCS7 719 aa12□□□□□ -0.49
ATG4A-206ENST00000457035 RUFY2Q8WXA3 655 aa12□□□□□ -0.49
ATG4A-206ENST00000457035 MS4A4AQ96JQ5 239 aa12□□□□□ -0.49
ATG4A-206ENST00000457035 TRIM34Q9BYJ4 488 aa12□□□□□ -0.49
ATG4A-206ENST00000457035 NAPBQ9H115 298 aa12□□□□□ -0.49
ATG4A-206ENST00000457035 FRMD4AQ9P2Q2 1039 aaPredicted RBP12□□□□□ -0.49
ATG4A-206ENST00000457035 SWAP70Q9UH65 585 aa12□□□□□ -0.49
ATG4A-206ENST00000457035 SGSM2O43147 1006 aa11.99□□□□□ -0.49
ATG4A-206ENST00000457035 GDF11O95390 407 aa11.99□□□□□ -0.49
ATG4A-206ENST00000457035 PPIL2Q13356 520 aa11.99□□□□□ -0.49
ATG4A-206ENST00000457035 DGKZQ13574 1117 aa11.99□□□□□ -0.49
ATG4A-206ENST00000457035 OTUD5Q96G74 571 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms