RNA–Protein interactions for RNA: ENST00000456096.6

TVP23A-202, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-202ENST00000456096 P2RX7Q99572 595 aaKnown RBP20.5■□□□□ 0.87
TVP23A-202ENST00000456096 TMOD4Q9NZQ9 345 aa20.5■□□□□ 0.87
TVP23A-202ENST00000456096 MORF4L1Q9UBU8 362 aa20.5■□□□□ 0.87
TVP23A-202ENST00000456096 SAP30BPQ9UHR5 308 aaKnown RBP20.5■□□□□ 0.87
TVP23A-202ENST00000456096 FOCADQ5VW36 1801 aa20.5■□□□□ 0.87
TVP23A-202ENST00000456096 PEX10O60683 326 aa20.49■□□□□ 0.87
TVP23A-202ENST00000456096 GDF11O95390 407 aa20.49■□□□□ 0.87
TVP23A-202ENST00000456096 HMGCRP04035 888 aa20.49■□□□□ 0.87
TVP23A-202ENST00000456096 HOXA7P31268 230 aaPredicted RBP20.49■□□□□ 0.87
TVP23A-202ENST00000456096 DYNLL1P63167 89 aaKnown RBP20.49■□□□□ 0.87
TVP23A-202ENST00000456096 IRX3P78415 501 aaPredicted RBP20.49■□□□□ 0.87
TVP23A-202ENST00000456096 TRIM32Q13049 653 aa20.49■□□□□ 0.87
TVP23A-202ENST00000456096 TRIM34Q9BYJ4 488 aa20.49■□□□□ 0.87
TVP23A-202ENST00000456096 DBNLQ9UJU6 430 aaKnown RBP20.49■□□□□ 0.87
TVP23A-202ENST00000456096 DIS3LQ8TF46 1054 aaKnown RBP20.48■□□□□ 0.87
TVP23A-202ENST00000456096 CCDC8Q9H0W5 538 aaPredicted RBP20.48■□□□□ 0.87
TVP23A-202ENST00000456096 TLR7Q9NYK1 1049 aaKnown RBP20.48■□□□□ 0.87
TVP23A-202ENST00000456096 NOP58Q9Y2X3 529 aaKnown RBP20.48■□□□□ 0.87
TVP23A-202ENST00000456096 PLXNB2O15031 1838 aa20.48■□□□□ 0.87
TVP23A-202ENST00000456096 LAMA3Q16787 3333 aa20.48■□□□□ 0.87
TVP23A-202ENST00000456096 C19orf81C9J6K1 198 aa20.47■□□□□ 0.87
TVP23A-202ENST00000456096 USP17L10C9JJH3 530 aa20.47■□□□□ 0.87
TVP23A-202ENST00000456096 HERVK_113P62684 666 aa20.47■□□□□ 0.87
TVP23A-202ENST00000456096 NECAB2Q7Z6G3 386 aa20.47■□□□□ 0.87
TVP23A-202ENST00000456096 EAF2Q96CJ1 260 aaPredicted RBP20.47■□□□□ 0.87
TVP23A-202ENST00000456096 TXNRD2Q9NNW7 524 aa20.47■□□□□ 0.87
TVP23A-202ENST00000456096 HMX1Q9NP08 348 aaPredicted RBP20.47■□□□□ 0.87
TVP23A-202ENST00000456096 GINM1Q9NU53 330 aa20.47■□□□□ 0.87
TVP23A-202ENST00000456096 ZBTB21Q9ULJ3 1066 aa20.47■□□□□ 0.87
TVP23A-202ENST00000456096 IGSF3O75054 1194 aa20.46■□□□□ 0.87
TVP23A-202ENST00000456096 CYP2B6P20813 491 aa20.46■□□□□ 0.87
TVP23A-202ENST00000456096 CYP7A1P22680 504 aa20.46■□□□□ 0.87
TVP23A-202ENST00000456096 FTSJ3Q8IY81 847 aaKnown RBP20.46■□□□□ 0.87
TVP23A-202ENST00000456096 GPRC5AQ8NFJ5 357 aa20.46■□□□□ 0.87
TVP23A-202ENST00000456096 RBPJLQ9UBG7 517 aa20.46■□□□□ 0.87
TVP23A-202ENST00000456096 ALPK3Q96L96 1907 aa20.46■□□□□ 0.87
TVP23A-202ENST00000456096 RPTORQ8N122 1335 aa20.46■□□□□ 0.87
TVP23A-202ENST00000456096 IDH1O75874 414 aaKnown RBP20.45■□□□□ 0.86
TVP23A-202ENST00000456096 HLA-DOAP06340 250 aa20.45■□□□□ 0.86
TVP23A-202ENST00000456096 RLBP1P12271 317 aa20.45■□□□□ 0.86
TVP23A-202ENST00000456096 ITPRIPQ8IWB1 547 aa20.45■□□□□ 0.86
TVP23A-202ENST00000456096 MIGA1Q8NAN2 632 aa20.45■□□□□ 0.86
TVP23A-202ENST00000456096 TRIB2Q92519 343 aa20.45■□□□□ 0.86
TVP23A-202ENST00000456096 EMILIN3Q9NT22 766 aa20.45■□□□□ 0.86
TVP23A-202ENST00000456096 ANKLE1Q8NAG6 615 aa20.44■□□□□ 0.86
TVP23A-202ENST00000456096 STAP2Q9UGK3 403 aa20.44■□□□□ 0.86
TVP23A-202ENST00000456096 NDUFB9Q9Y6M9 179 aa20.44■□□□□ 0.86
TVP23A-202ENST00000456096 MYH1P12882 1939 aa20.44■□□□□ 0.86
TVP23A-202ENST00000456096 DNAH12Q6ZR08 3092 aa20.44■□□□□ 0.86
TVP23A-202ENST00000456096 GH2P01242 217 aa20.43■□□□□ 0.86
TVP23A-202ENST00000456096 Q3C1V9 767 aa20.43■□□□□ 0.86
TVP23A-202ENST00000456096 MAGEB6Q8N7X4 407 aa20.43■□□□□ 0.86
TVP23A-202ENST00000456096 NUDT12Q9BQG2 462 aa20.43■□□□□ 0.86
TVP23A-202ENST00000456096 USP5P45974 858 aa20.42■□□□□ 0.86
TVP23A-202ENST00000456096 MNX1P50219 401 aaPredicted RBP20.42■□□□□ 0.86
TVP23A-202ENST00000456096 MAP3K21Q5TCX8 1036 aa20.42■□□□□ 0.86
TVP23A-202ENST00000456096 USP17L2Q6R6M4 530 aa20.42■□□□□ 0.86
TVP23A-202ENST00000456096 POTEEQ6S8J3 1075 aa20.42■□□□□ 0.86
TVP23A-202ENST00000456096 PAGR1Q9BTK6 254 aa20.42■□□□□ 0.86
TVP23A-202ENST00000456096 NBPF3Q9H094 633 aa20.42■□□□□ 0.86
TVP23A-202ENST00000456096 PORCNQ9H237 461 aa20.42■□□□□ 0.86
TVP23A-202ENST00000456096 ANTXR1Q9H6X2 564 aa20.42■□□□□ 0.86
TVP23A-202ENST00000456096 COL6A3P12111 3177 aa20.41■□□□□ 0.86
TVP23A-202ENST00000456096 A0A1W2PPC1 479 aa20.41■□□□□ 0.86
TVP23A-202ENST00000456096 XRCC5P13010 732 aaKnown RBP20.41■□□□□ 0.86
TVP23A-202ENST00000456096 PRKAR2AP13861 404 aaKnown RBP20.41■□□□□ 0.86
TVP23A-202ENST00000456096 MAPK4P31152 587 aa20.41■□□□□ 0.86
TVP23A-202ENST00000456096 ERVK-9P63128 1117 aa20.41■□□□□ 0.86
TVP23A-202ENST00000456096 ERVK-24P63145 666 aa20.41■□□□□ 0.86
TVP23A-202ENST00000456096 TATDN1Q6P1N9 297 aa20.41■□□□□ 0.86
TVP23A-202ENST00000456096 SOCS4Q8WXH5 440 aa20.41■□□□□ 0.86
TVP23A-202ENST00000456096 OGDHLQ9ULD0 1010 aa20.41■□□□□ 0.86
TVP23A-202ENST00000456096 HNRNPUQ00839 825 aaKnown RBP eCLIP20.4■□□□□ 0.86
TVP23A-202ENST00000456096 PDE3AQ14432 1141 aa20.4■□□□□ 0.86
TVP23A-202ENST00000456096 CEP85Q6P2H3 762 aa20.4■□□□□ 0.86
TVP23A-202ENST00000456096 CERS3Q8IU89 383 aa20.4■□□□□ 0.86
TVP23A-202ENST00000456096 CCAR1Q8IX12 1150 aaKnown RBP20.4■□□□□ 0.86
TVP23A-202ENST00000456096 C7orf61Q8IZ16 206 aa20.4■□□□□ 0.86
TVP23A-202ENST00000456096 USP6NLQ92738 828 aa20.4■□□□□ 0.86
TVP23A-202ENST00000456096 SERPINB13Q9UIV8 391 aa20.4■□□□□ 0.86
TVP23A-202ENST00000456096 A0A0C4DFX4 3053 aa20.4■□□□□ 0.86
TVP23A-202ENST00000456096 DDX60LQ5H9U9 1706 aaKnown RBP20.39■□□□□ 0.86
TVP23A-202ENST00000456096 MAP3K12Q12852 859 aa20.39■□□□□ 0.85
TVP23A-202ENST00000456096 ZYXQ15942 572 aaKnown RBP20.39■□□□□ 0.85
TVP23A-202ENST00000456096 MORN1Q5T089 497 aa20.39■□□□□ 0.85
TVP23A-202ENST00000456096 GPR142Q7Z601 462 aa20.39■□□□□ 0.85
TVP23A-202ENST00000456096 GTF3C2Q8WUA4 911 aaPredicted RBP20.39■□□□□ 0.85
TVP23A-202ENST00000456096 EHD4Q9H223 541 aa20.39■□□□□ 0.85
TVP23A-202ENST00000456096 C11orf49Q9H6J7 331 aa20.39■□□□□ 0.85
TVP23A-202ENST00000456096 EXOC6BQ9Y2D4 811 aa20.39■□□□□ 0.85
TVP23A-202ENST00000456096 SOX1O00570 391 aaPredicted RBP20.38■□□□□ 0.85
TVP23A-202ENST00000456096 ZKSCAN1P17029 563 aaPredicted RBP20.38■□□□□ 0.85
TVP23A-202ENST00000456096 CACNB2Q08289 660 aaPredicted RBP20.38■□□□□ 0.85
TVP23A-202ENST00000456096 RAB3GAP1Q15042 981 aa20.38■□□□□ 0.85
TVP23A-202ENST00000456096 PLEKHH3Q7Z736 793 aa20.38■□□□□ 0.85
TVP23A-202ENST00000456096 AACSQ86V21 672 aa20.38■□□□□ 0.85
TVP23A-202ENST00000456096 TRMT44Q8IYL2 757 aaKnown RBP20.38■□□□□ 0.85
TVP23A-202ENST00000456096 C12orf42Q96LP6 360 aa20.38■□□□□ 0.85
TVP23A-202ENST00000456096 FEZ1Q99689 392 aa20.38■□□□□ 0.85
TVP23A-202ENST00000456096 ZMYND8Q9ULU4 1186 aaPredicted RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms