RNA–Protein interactions for RNA: ENST00000455906.1

COL20A1-204, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 5

Gene COL20A1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-204ENST00000455906 PAK6Q9NQU5 681 aaPredicted RBP22.91■■□□□ 1.26
COL20A1-204ENST00000455906 HTATIP2Q9BUP3 242 aa22.9■■□□□ 1.26
COL20A1-204ENST00000455906 MORF4L1Q9UBU8 362 aa22.9■■□□□ 1.26
COL20A1-204ENST00000455906 SAP30BPQ9UHR5 308 aaKnown RBP22.9■■□□□ 1.26
COL20A1-204ENST00000455906 GJD2Q9UKL4 321 aa22.9■■□□□ 1.26
COL20A1-204ENST00000455906 TAOK2Q9UL54 1235 aa22.9■■□□□ 1.26
COL20A1-204ENST00000455906 GDF11O95390 407 aa22.89■■□□□ 1.25
COL20A1-204ENST00000455906 CYP7A1P22680 504 aa22.89■■□□□ 1.25
COL20A1-204ENST00000455906 HOXA7P31268 230 aaPredicted RBP22.89■■□□□ 1.25
COL20A1-204ENST00000455906 CRACR2BQ8N4Y2 399 aaPredicted RBP22.89■■□□□ 1.25
COL20A1-204ENST00000455906 DEFB118Q96PH6 123 aa22.89■■□□□ 1.25
COL20A1-204ENST00000455906 GINM1Q9NU53 330 aa22.89■■□□□ 1.25
COL20A1-204ENST00000455906 ZBTB21Q9ULJ3 1066 aa22.89■■□□□ 1.25
COL20A1-204ENST00000455906 NDUFB9Q9Y6M9 179 aa22.89■■□□□ 1.25
COL20A1-204ENST00000455906 IDH1O75874 414 aaKnown RBP22.88■■□□□ 1.25
COL20A1-204ENST00000455906 CHRDL2Q6WN34 429 aa22.88■■□□□ 1.25
COL20A1-204ENST00000455906 P2RX7Q99572 595 aaKnown RBP22.88■■□□□ 1.25
COL20A1-204ENST00000455906 CRISPLD2Q9H0B8 497 aa22.88■■□□□ 1.25
COL20A1-204ENST00000455906 C19orf81C9J6K1 198 aa22.87■■□□□ 1.25
COL20A1-204ENST00000455906 MIGA1Q8NAN2 632 aa22.87■■□□□ 1.25
COL20A1-204ENST00000455906 TRIM34Q9BYJ4 488 aa22.87■■□□□ 1.25
COL20A1-204ENST00000455906 ANTXR1Q9H6X2 564 aa22.87■■□□□ 1.25
COL20A1-204ENST00000455906 TMOD4Q9NZQ9 345 aa22.87■■□□□ 1.25
COL20A1-204ENST00000455906 EXOC6BQ9Y2D4 811 aa22.87■■□□□ 1.25
COL20A1-204ENST00000455906 USP17L10C9JJH3 530 aa22.86■■□□□ 1.25
COL20A1-204ENST00000455906 PEX10O60683 326 aa22.86■■□□□ 1.25
COL20A1-204ENST00000455906 TFRCP02786 760 aaKnown RBP22.86■■□□□ 1.25
COL20A1-204ENST00000455906 HLA-DOAP06340 250 aa22.86■■□□□ 1.25
COL20A1-204ENST00000455906 CAPN2P17655 700 aa22.86■■□□□ 1.25
COL20A1-204ENST00000455906 IRX3P78415 501 aaPredicted RBP22.86■■□□□ 1.25
COL20A1-204ENST00000455906 MAGEB6Q8N7X4 407 aa22.86■■□□□ 1.25
COL20A1-204ENST00000455906 TXNRD2Q9NNW7 524 aa22.86■■□□□ 1.25
COL20A1-204ENST00000455906 LAMA3Q16787 3333 aa22.85■■□□□ 1.25
COL20A1-204ENST00000455906 ALPK3Q96L96 1907 aa22.85■■□□□ 1.25
COL20A1-204ENST00000455906 HMGCRP04035 888 aa22.85■■□□□ 1.25
COL20A1-204ENST00000455906 HERVK_113P62684 666 aa22.85■■□□□ 1.25
COL20A1-204ENST00000455906 PANK1Q8TE04 598 aa22.85■■□□□ 1.25
COL20A1-204ENST00000455906 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.85■■□□□ 1.25
COL20A1-204ENST00000455906 TRIM32Q13049 653 aa22.84■■□□□ 1.25
COL20A1-204ENST00000455906 TATDN1Q6P1N9 297 aa22.84■■□□□ 1.25
COL20A1-204ENST00000455906 AACSQ86V21 672 aa22.84■■□□□ 1.25
COL20A1-204ENST00000455906 CERS3Q8IU89 383 aa22.84■■□□□ 1.25
COL20A1-204ENST00000455906 PRO3102Q9H379 93 aa22.84■■□□□ 1.25
COL20A1-204ENST00000455906 EMILIN3Q9NT22 766 aa22.84■■□□□ 1.25
COL20A1-204ENST00000455906 RBM27Q9P2N5 1060 aaKnown RBP22.84■■□□□ 1.25
COL20A1-204ENST00000455906 DDX60LQ5H9U9 1706 aaKnown RBP22.84■■□□□ 1.25
COL20A1-204ENST00000455906 ZBED9Q6R2W3 1325 aa22.83■■□□□ 1.25
COL20A1-204ENST00000455906 GH2P01242 217 aa22.83■■□□□ 1.25
COL20A1-204ENST00000455906 POTEEQ6S8J3 1075 aa22.83■■□□□ 1.25
COL20A1-204ENST00000455906 ERC1Q8IUD2 1116 aa22.83■■□□□ 1.25
COL20A1-204ENST00000455906 RBPJLQ9UBG7 517 aa22.83■■□□□ 1.25
COL20A1-204ENST00000455906 NR2E3Q9Y5X4 410 aa22.83■■□□□ 1.25
COL20A1-204ENST00000455906 USP5P45974 858 aa22.82■■□□□ 1.24
COL20A1-204ENST00000455906 MAP3K12Q12852 859 aa22.82■■□□□ 1.24
COL20A1-204ENST00000455906 GPRC5AQ8NFJ5 357 aa22.82■■□□□ 1.24
COL20A1-204ENST00000455906 PAWRQ96IZ0 340 aaKnown RBP22.82■■□□□ 1.24
COL20A1-204ENST00000455906 EHD4Q9H223 541 aa22.82■■□□□ 1.24
COL20A1-204ENST00000455906 Q3C1V9 767 aa22.81■■□□□ 1.24
COL20A1-204ENST00000455906 TMED8Q6PL24 325 aaPredicted RBP22.81■■□□□ 1.24
COL20A1-204ENST00000455906 TRIB2Q92519 343 aa22.81■■□□□ 1.24
COL20A1-204ENST00000455906 RIOK1Q9BRS2 568 aaKnown RBP22.81■■□□□ 1.24
COL20A1-204ENST00000455906 IL1RAPL2Q9NP60 686 aa22.81■■□□□ 1.24
COL20A1-204ENST00000455906 SERPINB13Q9UIV8 391 aa22.81■■□□□ 1.24
COL20A1-204ENST00000455906 RPTORQ8N122 1335 aa22.81■■□□□ 1.24
COL20A1-204ENST00000455906 USP17L2Q6R6M4 530 aa22.8■■□□□ 1.24
COL20A1-204ENST00000455906 RHPN1Q8TCX5 695 aa22.8■■□□□ 1.24
COL20A1-204ENST00000455906 DIS3LQ8TF46 1054 aaKnown RBP22.8■■□□□ 1.24
COL20A1-204ENST00000455906 C12orf42Q96LP6 360 aa22.8■■□□□ 1.24
COL20A1-204ENST00000455906 NAV1Q8NEY1 1877 aa22.79■■□□□ 1.24
COL20A1-204ENST00000455906 CYP2B6P20813 491 aa22.79■■□□□ 1.24
COL20A1-204ENST00000455906 ERVK-9P63128 1117 aa22.79■■□□□ 1.24
COL20A1-204ENST00000455906 ERVK-24P63145 666 aa22.79■■□□□ 1.24
COL20A1-204ENST00000455906 MAP3K21Q5TCX8 1036 aa22.79■■□□□ 1.24
COL20A1-204ENST00000455906 PORCNQ9H237 461 aa22.79■■□□□ 1.24
COL20A1-204ENST00000455906 HMX1Q9NP08 348 aaPredicted RBP22.79■■□□□ 1.24
COL20A1-204ENST00000455906 EVI5O60447 810 aa22.78■■□□□ 1.24
COL20A1-204ENST00000455906 XRCC5P13010 732 aaKnown RBP22.78■■□□□ 1.24
COL20A1-204ENST00000455906 HSP90AB4PQ58FF6 505 aa22.78■■□□□ 1.24
COL20A1-204ENST00000455906 DIEXFQ68CQ4 756 aaKnown RBP22.78■■□□□ 1.24
COL20A1-204ENST00000455906 TTC6Q86TZ1 520 aa22.78■■□□□ 1.24
COL20A1-204ENST00000455906 ANKLE1Q8NAG6 615 aa22.78■■□□□ 1.24
COL20A1-204ENST00000455906 GTF3C2Q8WUA4 911 aaPredicted RBP22.78■■□□□ 1.24
COL20A1-204ENST00000455906 SOCS4Q8WXH5 440 aa22.78■■□□□ 1.24
COL20A1-204ENST00000455906 USP6NLQ92738 828 aa22.78■■□□□ 1.24
COL20A1-204ENST00000455906 NUDT12Q9BQG2 462 aa22.78■■□□□ 1.24
COL20A1-204ENST00000455906 MAPK4P31152 587 aa22.77■■□□□ 1.24
COL20A1-204ENST00000455906 SHMT1P34896 483 aa22.77■■□□□ 1.24
COL20A1-204ENST00000455906 MNX1P50219 401 aaPredicted RBP22.77■■□□□ 1.24
COL20A1-204ENST00000455906 PLCD1P51178 756 aa22.77■■□□□ 1.24
COL20A1-204ENST00000455906 NECAB2Q7Z6G3 386 aa22.77■■□□□ 1.24
COL20A1-204ENST00000455906 PAGR1Q9BTK6 254 aa22.77■■□□□ 1.24
COL20A1-204ENST00000455906 RAB3GAP1Q15042 981 aa22.76■■□□□ 1.23
COL20A1-204ENST00000455906 ZYXQ15942 572 aaKnown RBP22.76■■□□□ 1.23
COL20A1-204ENST00000455906 ABCB5Q2M3G0 1257 aa22.76■■□□□ 1.23
COL20A1-204ENST00000455906 CERKLQ49MI3 558 aaPredicted RBP22.76■■□□□ 1.23
COL20A1-204ENST00000455906 GPR142Q7Z601 462 aa22.76■■□□□ 1.23
COL20A1-204ENST00000455906 ACER1Q8TDN7 264 aa22.76■■□□□ 1.23
COL20A1-204ENST00000455906 MAGEB6P1A0A0J9YX57 407 aa22.75■■□□□ 1.23
COL20A1-204ENST00000455906 CNMDO75829 334 aa22.75■■□□□ 1.23
COL20A1-204ENST00000455906 PRKAR2AP13861 404 aaKnown RBP22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms