RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 TMEM87BQ96K49 555 aa5.78□□□□□ -1.48
CSMD3-204ENST00000455883 MPP6Q9NZW5 540 aa5.78□□□□□ -1.48
CSMD3-204ENST00000455883 CD109Q6YHK3 1445 aa5.78□□□□□ -1.48
CSMD3-204ENST00000455883 SERPINB4P48594 390 aa5.78□□□□□ -1.48
CSMD3-204ENST00000455883 NOP2P46087 812 aaKnown RBP5.78□□□□□ -1.48
CSMD3-204ENST00000455883 EXOC8Q8IYI6 725 aa5.78□□□□□ -1.48
CSMD3-204ENST00000455883 TFIP11Q9UBB9 837 aaKnown RBP5.78□□□□□ -1.48
CSMD3-204ENST00000455883 IPO11Q9UI26 975 aaKnown RBP5.78□□□□□ -1.48
CSMD3-204ENST00000455883 ADGRL2O95490 1459 aa5.78□□□□□ -1.48
CSMD3-204ENST00000455883 KRT3P12035 628 aa5.78□□□□□ -1.48
CSMD3-204ENST00000455883 METAP2P50579 478 aaKnown RBP eCLIP5.78□□□□□ -1.48
CSMD3-204ENST00000455883 SAMD9Q5K651 1589 aa5.78□□□□□ -1.48
CSMD3-204ENST00000455883 GOLGA8AA7E2F4 631 aa5.78□□□□□ -1.48
CSMD3-204ENST00000455883 CFAP70Q5T0N1 1121 aa5.78□□□□□ -1.48
CSMD3-204ENST00000455883 TPX2Q9ULW0 747 aaKnown RBP5.78□□□□□ -1.48
CSMD3-204ENST00000455883 TDRD9Q8NDG6 1382 aaKnown RBP5.78□□□□□ -1.48
CSMD3-204ENST00000455883 IRX1P78414 480 aaPredicted RBP5.78□□□□□ -1.48
CSMD3-204ENST00000455883 STAMBPL1Q96FJ0 436 aa5.78□□□□□ -1.48
CSMD3-204ENST00000455883 COMMD10Q9Y6G5 202 aa5.78□□□□□ -1.48
CSMD3-204ENST00000455883 ANKRD20A4Q4UJ75 823 aa5.77□□□□□ -1.49
CSMD3-204ENST00000455883 ANKRD20A8PQ5CZ79 823 aa5.77□□□□□ -1.49
CSMD3-204ENST00000455883 ANKRD20A2Q5SQ80 823 aa5.77□□□□□ -1.49
CSMD3-204ENST00000455883 ANKRD20A1Q5TYW2 823 aa5.77□□□□□ -1.49
CSMD3-204ENST00000455883 SNCBQ16143 134 aa5.77□□□□□ -1.49
CSMD3-204ENST00000455883 TRIM60Q495X7 471 aa5.77□□□□□ -1.49
CSMD3-204ENST00000455883 PRR16Q569H4 304 aa5.77□□□□□ -1.49
CSMD3-204ENST00000455883 LRP2BPQ9P2M1 347 aa5.77□□□□□ -1.49
CSMD3-204ENST00000455883 DNAJC13O75165 2243 aa5.77□□□□□ -1.49
CSMD3-204ENST00000455883 hCG_1984214I3L0E3 225 aa5.77□□□□□ -1.49
CSMD3-204ENST00000455883 KRT16P08779 473 aa5.77□□□□□ -1.49
CSMD3-204ENST00000455883 P4HA1P13674 534 aa5.77□□□□□ -1.49
CSMD3-204ENST00000455883 CAV1Q03135 178 aa5.77□□□□□ -1.49
CSMD3-204ENST00000455883 CCDC117Q8IWD4 279 aaPredicted RBP5.77□□□□□ -1.49
CSMD3-204ENST00000455883 TCP11Q8WWU5 503 aa5.77□□□□□ -1.49
CSMD3-204ENST00000455883 TMEM51Q9NW97 253 aa5.77□□□□□ -1.49
CSMD3-204ENST00000455883 SCOCQ9UIL1 159 aa5.77□□□□□ -1.49
CSMD3-204ENST00000455883 TACC3Q9Y6A5 838 aa5.77□□□□□ -1.49
CSMD3-204ENST00000455883 SPTLC2O15270 562 aa5.77□□□□□ -1.49
CSMD3-204ENST00000455883 RBM6P78332 1123 aaKnown RBP5.77□□□□□ -1.49
CSMD3-204ENST00000455883 GPATCH11Q8N954 259 aa5.77□□□□□ -1.49
CSMD3-204ENST00000455883 H7C0S8 307 aa5.77□□□□□ -1.49
CSMD3-204ENST00000455883 ZFXP17010 805 aaPredicted RBP5.77□□□□□ -1.49
CSMD3-204ENST00000455883 GRM1Q13255 1194 aa5.77□□□□□ -1.49
CSMD3-204ENST00000455883 RUFY3Q7L099 469 aa5.77□□□□□ -1.49
CSMD3-204ENST00000455883 CCDC125Q86Z20 511 aa5.77□□□□□ -1.49
CSMD3-204ENST00000455883 DRC1Q96MC2 740 aa5.77□□□□□ -1.49
CSMD3-204ENST00000455883 A0A087WUV0 522 aaPredicted RBP5.77□□□□□ -1.49
CSMD3-204ENST00000455883 CCDC160A6NGH7 325 aa5.77□□□□□ -1.49
CSMD3-204ENST00000455883 F13A1P00488 732 aa5.77□□□□□ -1.49
CSMD3-204ENST00000455883 IPO4Q8TEX9 1081 aaKnown RBP5.77□□□□□ -1.49
CSMD3-204ENST00000455883 CSRNP1Q96S65 589 aa5.77□□□□□ -1.49
CSMD3-204ENST00000455883 ANGPTL2Q9UKU9 493 aa5.77□□□□□ -1.49
CSMD3-204ENST00000455883 EPB41P11171 864 aaKnown RBP5.77□□□□□ -1.49
CSMD3-204ENST00000455883 TEX12Q9BXU0 123 aa5.77□□□□□ -1.49
CSMD3-204ENST00000455883 MIS18AQ9NYP9 233 aa5.77□□□□□ -1.49
CSMD3-204ENST00000455883 DIS3Q9Y2L1 958 aaKnown RBP5.77□□□□□ -1.49
CSMD3-204ENST00000455883 RIMS2Q9UQ26 1411 aa5.77□□□□□ -1.49
CSMD3-204ENST00000455883 SENP1Q9P0U3 644 aa5.77□□□□□ -1.49
CSMD3-204ENST00000455883 KIAA0556O60303 1618 aa5.77□□□□□ -1.49
CSMD3-204ENST00000455883 ABCC10Q5T3U5 1492 aa5.77□□□□□ -1.49
CSMD3-204ENST00000455883 SERPINI1Q99574 410 aa5.77□□□□□ -1.49
CSMD3-204ENST00000455883 CRNKL1Q9BZJ0 848 aaKnown RBP5.77□□□□□ -1.49
CSMD3-204ENST00000455883 TRIM15Q9C019 465 aa5.77□□□□□ -1.49
CSMD3-204ENST00000455883 ARHGEF37A1IGU5 675 aa5.76□□□□□ -1.49
CSMD3-204ENST00000455883 CFAP73A6NFT4 308 aa5.76□□□□□ -1.49
CSMD3-204ENST00000455883 TRAPPC10P48553 1259 aa5.76□□□□□ -1.49
CSMD3-204ENST00000455883 PPP2R5DQ14738 602 aa5.76□□□□□ -1.49
CSMD3-204ENST00000455883 PPP1R7Q15435 360 aa5.76□□□□□ -1.49
CSMD3-204ENST00000455883 CRACR2BQ8N4Y2 399 aaPredicted RBP5.76□□□□□ -1.49
CSMD3-204ENST00000455883 ATP10DQ9P241 1426 aa5.76□□□□□ -1.49
CSMD3-204ENST00000455883 EIF2S1P05198 315 aaKnown RBP5.76□□□□□ -1.49
CSMD3-204ENST00000455883 KIF23Q02241 960 aaPredicted RBP5.76□□□□□ -1.49
CSMD3-204ENST00000455883 TAF11Q15544 211 aa5.76□□□□□ -1.49
CSMD3-204ENST00000455883 ZSCAN26Q16670 478 aa5.76□□□□□ -1.49
CSMD3-204ENST00000455883 MUM1Q2TAK8 710 aa5.76□□□□□ -1.49
CSMD3-204ENST00000455883 PLB1Q6P1J6 1458 aa5.76□□□□□ -1.49
CSMD3-204ENST00000455883 ZBTB43O43298 467 aa5.76□□□□□ -1.49
CSMD3-204ENST00000455883 CCDC122Q5T0U0 273 aa5.76□□□□□ -1.49
CSMD3-204ENST00000455883 CCT6BQ92526 530 aa5.76□□□□□ -1.49
CSMD3-204ENST00000455883 KDM2BQ8NHM5 1336 aa5.76□□□□□ -1.49
CSMD3-204ENST00000455883 ADCY10Q96PN6 1610 aa5.76□□□□□ -1.49
CSMD3-204ENST00000455883 SVILO95425 2214 aa5.76□□□□□ -1.49
CSMD3-204ENST00000455883 CUTAO60888 179 aa5.76□□□□□ -1.49
CSMD3-204ENST00000455883 RFX1P22670 979 aa5.76□□□□□ -1.49
CSMD3-204ENST00000455883 CDC37Q16543 378 aaPredicted RBP5.76□□□□□ -1.49
CSMD3-204ENST00000455883 METTL14Q9HCE5 456 aaKnown RBP5.76□□□□□ -1.49
CSMD3-204ENST00000455883 PRAG1Q86YV5 1406 aa5.76□□□□□ -1.49
CSMD3-204ENST00000455883 HOXB6P17509 224 aaKnown RBP5.76□□□□□ -1.49
CSMD3-204ENST00000455883 IFT81Q8WYA0 676 aa5.76□□□□□ -1.49
CSMD3-204ENST00000455883 SEPT10Q9P0V9 454 aa5.76□□□□□ -1.49
CSMD3-204ENST00000455883 TTLL7Q6ZT98 887 aa5.76□□□□□ -1.49
CSMD3-204ENST00000455883 MAK16Q9BXY0 300 aaKnown RBP5.76□□□□□ -1.49
CSMD3-204ENST00000455883 PPP1R9AQ9ULJ8 1098 aa5.76□□□□□ -1.49
CSMD3-204ENST00000455883 RFX7Q2KHR2 1363 aa5.76□□□□□ -1.49
CSMD3-204ENST00000455883 KIAA0232Q92628 1395 aa5.76□□□□□ -1.49
CSMD3-204ENST00000455883 SLC26A4O43511 780 aa5.76□□□□□ -1.49
CSMD3-204ENST00000455883 CALUO43852 315 aaPredicted RBP5.76□□□□□ -1.49
CSMD3-204ENST00000455883 IL15P40933 162 aaPredicted RBP5.76□□□□□ -1.49
CSMD3-204ENST00000455883 RBM5P52756 815 aaKnown RBP eCLIP5.76□□□□□ -1.49
CSMD3-204ENST00000455883 SYCP3Q8IZU3 236 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms