RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 CCL14Q16627 93 aa28.65■■■□□ 2.18
PTPRA-208ENST00000455631 GORABQ5T7V8 394 aa28.65■■■□□ 2.18
PTPRA-208ENST00000455631 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.65■■■□□ 2.18
PTPRA-208ENST00000455631 NOL10Q9BSC4 688 aaKnown RBP28.65■■■□□ 2.18
PTPRA-208ENST00000455631 LHX8Q68G74 356 aa28.64■■■□□ 2.18
PTPRA-208ENST00000455631 GPR142Q7Z601 462 aa28.64■■■□□ 2.18
PTPRA-208ENST00000455631 APBA2Q99767 749 aa28.64■■■□□ 2.18
PTPRA-208ENST00000455631 PAGR1Q9BTK6 254 aa28.64■■■□□ 2.18
PTPRA-208ENST00000455631 PORCNQ9H237 461 aa28.64■■■□□ 2.18
PTPRA-208ENST00000455631 DHX36Q9H2U1 1008 aaKnown RBP28.64■■■□□ 2.18
PTPRA-208ENST00000455631 NOB1Q9ULX3 412 aaKnown RBP28.64■■■□□ 2.18
PTPRA-208ENST00000455631 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.64■■■□□ 2.18
PTPRA-208ENST00000455631 MAST2Q6P0Q8 1798 aa28.63■■■□□ 2.17
PTPRA-208ENST00000455631 C19orf81C9J6K1 198 aa28.63■■■□□ 2.17
PTPRA-208ENST00000455631 SRGAP3O43295 1099 aa28.63■■■□□ 2.17
PTPRA-208ENST00000455631 ERVK-9P63128 1117 aa28.63■■■□□ 2.17
PTPRA-208ENST00000455631 ERVK-24P63145 666 aa28.63■■■□□ 2.17
PTPRA-208ENST00000455631 SLFN5Q08AF3 891 aa28.63■■■□□ 2.17
PTPRA-208ENST00000455631 CWC22Q9HCG8 908 aaKnown RBP28.63■■■□□ 2.17
PTPRA-208ENST00000455631 LRP2BPQ9P2M1 347 aa28.63■■■□□ 2.17
PTPRA-208ENST00000455631 RBPJLQ9UBG7 517 aa28.63■■■□□ 2.17
PTPRA-208ENST00000455631 JAG1P78504 1218 aa28.62■■■□□ 2.17
PTPRA-208ENST00000455631 Q3C1V9 767 aa28.62■■■□□ 2.17
PTPRA-208ENST00000455631 USP6NLQ92738 828 aa28.62■■■□□ 2.17
PTPRA-208ENST00000455631 TRIM34Q9BYJ4 488 aa28.62■■■□□ 2.17
PTPRA-208ENST00000455631 API5Q9BZZ5 524 aaKnown RBP28.62■■■□□ 2.17
PTPRA-208ENST00000455631 CDK5RAP2Q96SN8 1893 aa28.61■■■□□ 2.17
PTPRA-208ENST00000455631 USP17L10C9JJH3 530 aa28.61■■■□□ 2.17
PTPRA-208ENST00000455631 GDF11O95390 407 aa28.61■■■□□ 2.17
PTPRA-208ENST00000455631 ARID4AP29374 1257 aaPredicted RBP28.61■■■□□ 2.17
PTPRA-208ENST00000455631 SHROOM1Q2M3G4 852 aaPredicted RBP28.61■■■□□ 2.17
PTPRA-208ENST00000455631 MORN1Q5T089 497 aa28.61■■■□□ 2.17
PTPRA-208ENST00000455631 PLEKHH3Q7Z736 793 aa28.61■■■□□ 2.17
PTPRA-208ENST00000455631 CRACR2BQ8N4Y2 399 aaPredicted RBP28.61■■■□□ 2.17
PTPRA-208ENST00000455631 GUCD1Q96NT3 240 aa28.61■■■□□ 2.17
PTPRA-208ENST00000455631 DNAJC18Q9H819 358 aa28.61■■■□□ 2.17
PTPRA-208ENST00000455631 AATFQ9NY61 560 aaKnown RBP eCLIP28.61■■■□□ 2.17
PTPRA-208ENST00000455631 GTF3C2Q8WUA4 911 aaPredicted RBP28.6■■■□□ 2.17
PTPRA-208ENST00000455631 FAM161BQ96MY7 647 aa28.6■■■□□ 2.17
PTPRA-208ENST00000455631 LBHD1Q9BQE6 289 aaPredicted RBP28.6■■■□□ 2.17
PTPRA-208ENST00000455631 FOCADQ5VW36 1801 aa28.59■■■□□ 2.17
PTPRA-208ENST00000455631 MCAMP43121 646 aa28.59■■■□□ 2.17
PTPRA-208ENST00000455631 MAPKAPK5Q8IW41 473 aa28.59■■■□□ 2.17
PTPRA-208ENST00000455631 ZBTB21Q9ULJ3 1066 aa28.59■■■□□ 2.17
PTPRA-208ENST00000455631 POTEB2H3BUK9 544 aa28.58■■■□□ 2.17
PTPRA-208ENST00000455631 BAG3O95817 575 aa28.58■■■□□ 2.17
PTPRA-208ENST00000455631 FAM109BQ6ICB4 259 aaPredicted RBP28.58■■■□□ 2.17
PTPRA-208ENST00000455631 TGFBRAP1Q8WUH2 860 aa28.58■■■□□ 2.17
PTPRA-208ENST00000455631 SENP6Q9GZR1 1112 aaPredicted RBP28.58■■■□□ 2.17
PTPRA-208ENST00000455631 FLT1P17948 1338 aa28.58■■■□□ 2.17
PTPRA-208ENST00000455631 PLCG2P16885 1265 aa28.57■■■□□ 2.16
PTPRA-208ENST00000455631 NAA16Q6N069 864 aaPredicted RBP28.57■■■□□ 2.16
PTPRA-208ENST00000455631 MAP2K5Q13163 448 aa28.56■■■□□ 2.16
PTPRA-208ENST00000455631 CDCA7LQ96GN5 454 aa28.56■■■□□ 2.16
PTPRA-208ENST00000455631 GINM1Q9NU53 330 aa28.56■■■□□ 2.16
PTPRA-208ENST00000455631 PALD1Q9ULE6 856 aa28.56■■■□□ 2.16
PTPRA-208ENST00000455631 MTX1Q13505 466 aa28.55■■■□□ 2.16
PTPRA-208ENST00000455631 WDR78Q5VTH9 848 aa28.55■■■□□ 2.16
PTPRA-208ENST00000455631 POTEEQ6S8J3 1075 aa28.55■■■□□ 2.16
PTPRA-208ENST00000455631 FOXP4Q8IVH2 680 aaPredicted RBP28.55■■■□□ 2.16
PTPRA-208ENST00000455631 EMILIN3Q9NT22 766 aa28.55■■■□□ 2.16
PTPRA-208ENST00000455631 NDUFB9Q9Y6M9 179 aa28.55■■■□□ 2.16
PTPRA-208ENST00000455631 GNAI3P08754 354 aa28.54■■■□□ 2.16
PTPRA-208ENST00000455631 UQCRFS1P1P0C7P4 283 aa28.54■■■□□ 2.16
PTPRA-208ENST00000455631 ZNF697Q5TEC3 545 aa28.54■■■□□ 2.16
PTPRA-208ENST00000455631 MFSD14CQ5VZR4 134 aa28.54■■■□□ 2.16
PTPRA-208ENST00000455631 USP17L2Q6R6M4 530 aa28.54■■■□□ 2.16
PTPRA-208ENST00000455631 METTL16Q86W50 562 aaKnown RBP28.54■■■□□ 2.16
PTPRA-208ENST00000455631 LTBP2Q14767 1821 aa28.53■■■□□ 2.16
PTPRA-208ENST00000455631 ATN1P54259 1190 aaPredicted RBP28.53■■■□□ 2.16
PTPRA-208ENST00000455631 ZYXQ15942 572 aaKnown RBP28.53■■■□□ 2.16
PTPRA-208ENST00000455631 EDC3Q96F86 508 aaKnown RBP28.53■■■□□ 2.16
PTPRA-208ENST00000455631 FEZ1Q99689 392 aa28.53■■■□□ 2.16
PTPRA-208ENST00000455631 SNRKQ9NRH2 765 aa28.53■■■□□ 2.16
PTPRA-208ENST00000455631 FLRT1Q9NZU1 646 aa28.53■■■□□ 2.16
PTPRA-208ENST00000455631 PRKAG2Q9UGJ0 569 aa28.53■■■□□ 2.16
PTPRA-208ENST00000455631 DDX20Q9UHI6 824 aaKnown RBP28.53■■■□□ 2.16
PTPRA-208ENST00000455631 SAP30BPQ9UHR5 308 aaKnown RBP28.53■■■□□ 2.16
PTPRA-208ENST00000455631 GLRX3O76003 335 aaKnown RBP28.52■■■□□ 2.16
PTPRA-208ENST00000455631 HLA-DOAP06340 250 aa28.52■■■□□ 2.16
PTPRA-208ENST00000455631 CNGA1P29973 690 aa28.52■■■□□ 2.16
PTPRA-208ENST00000455631 CCNA1P78396 465 aa28.52■■■□□ 2.16
PTPRA-208ENST00000455631 ADGRA1Q86SQ6 560 aa28.52■■■□□ 2.16
PTPRA-208ENST00000455631 RABGAP1Q9Y3P9 1069 aa28.52■■■□□ 2.16
PTPRA-208ENST00000455631 PPP4CP60510 307 aa28.51■■■□□ 2.15
PTPRA-208ENST00000455631 CNMDO75829 334 aa28.5■■■□□ 2.15
PTPRA-208ENST00000455631 GH2P01242 217 aa28.5■■■□□ 2.15
PTPRA-208ENST00000455631 LPAR1Q92633 364 aa28.5■■■□□ 2.15
PTPRA-208ENST00000455631 MYO5AQ9Y4I1 1855 aaKnown RBP28.49■■■□□ 2.15
PTPRA-208ENST00000455631 MSCO60682 206 aa28.49■■■□□ 2.15
PTPRA-208ENST00000455631 CT47B1P0C2W7 299 aaPredicted RBP28.49■■■□□ 2.15
PTPRA-208ENST00000455631 G3BP1Q13283 466 aaKnown RBP eCLIP28.49■■■□□ 2.15
PTPRA-208ENST00000455631 TTC39AQ5SRH9 613 aa28.49■■■□□ 2.15
PTPRA-208ENST00000455631 ATF7IPQ6VMQ6 1270 aa28.49■■■□□ 2.15
PTPRA-208ENST00000455631 DNAH12Q6ZR08 3092 aa28.49■■■□□ 2.15
PTPRA-208ENST00000455631 SLC15A5A6NIM6 579 aa28.48■■■□□ 2.15
PTPRA-208ENST00000455631 USP17L15C9J2P7 530 aa28.48■■■□□ 2.15
PTPRA-208ENST00000455631 USP17L13C9JLJ4 530 aa28.48■■■□□ 2.15
PTPRA-208ENST00000455631 USP17L11C9JVI0 530 aa28.48■■■□□ 2.15
PTPRA-208ENST00000455631 USP17L18D6R9N7 530 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms