RNA–Protein interactions for RNA: ENST00000454850.1

CLCN4-204, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 3

Gene CLCN4, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-204ENST00000454850 LDHCP07864 332 aa12.23□□□□□ -0.45
CLCN4-204ENST00000454850 XRCC5P13010 732 aaKnown RBP12.23□□□□□ -0.45
CLCN4-204ENST00000454850 MAPK4P31152 587 aa12.23□□□□□ -0.45
CLCN4-204ENST00000454850 RGS2P41220 211 aa12.23□□□□□ -0.45
CLCN4-204ENST00000454850 BACE1P56817 501 aa12.23□□□□□ -0.45
CLCN4-204ENST00000454850 GORABQ5T7V8 394 aa12.23□□□□□ -0.45
CLCN4-204ENST00000454850 TRMT44Q8IYL2 757 aaKnown RBP12.23□□□□□ -0.45
CLCN4-204ENST00000454850 SPATA5Q8NB90 893 aa12.23□□□□□ -0.45
CLCN4-204ENST00000454850 SH3RF3Q8TEJ3 882 aaPredicted RBP12.23□□□□□ -0.45
CLCN4-204ENST00000454850 NSUN4Q96CB9 384 aaKnown RBP12.23□□□□□ -0.45
CLCN4-204ENST00000454850 PORCNQ9H237 461 aa12.23□□□□□ -0.45
CLCN4-204ENST00000454850 COPRSQ9NQ92 184 aa12.23□□□□□ -0.45
CLCN4-204ENST00000454850 HMG20BQ9P0W2 317 aa12.23□□□□□ -0.45
CLCN4-204ENST00000454850 HERC5Q9UII4 1024 aaKnown RBP12.23□□□□□ -0.45
CLCN4-204ENST00000454850 ERVK-9P63128 1117 aa12.22□□□□□ -0.45
CLCN4-204ENST00000454850 ERVK-24P63145 666 aa12.22□□□□□ -0.45
CLCN4-204ENST00000454850 JAG1P78504 1218 aa12.22□□□□□ -0.45
CLCN4-204ENST00000454850 LHX8Q68G74 356 aa12.22□□□□□ -0.45
CLCN4-204ENST00000454850 GPR142Q7Z601 462 aa12.22□□□□□ -0.45
CLCN4-204ENST00000454850 APBA2Q99767 749 aa12.22□□□□□ -0.45
CLCN4-204ENST00000454850 LBHD1Q9BQE6 289 aaPredicted RBP12.22□□□□□ -0.45
CLCN4-204ENST00000454850 NOL10Q9BSC4 688 aaKnown RBP12.22□□□□□ -0.45
CLCN4-204ENST00000454850 WDR18Q9BV38 432 aa12.22□□□□□ -0.45
CLCN4-204ENST00000454850 TRIM34Q9BYJ4 488 aa12.22□□□□□ -0.45
CLCN4-204ENST00000454850 SENP6Q9GZR1 1112 aaPredicted RBP12.22□□□□□ -0.45
CLCN4-204ENST00000454850 RBPJLQ9UBG7 517 aa12.22□□□□□ -0.45
CLCN4-204ENST00000454850 AKAP2Q9Y2D5 859 aa12.22□□□□□ -0.45
CLCN4-204ENST00000454850 NDUFB9Q9Y6M9 179 aa12.22□□□□□ -0.45
CLCN4-204ENST00000454850 MYO9BQ13459 2157 aa12.22□□□□□ -0.45
CLCN4-204ENST00000454850 USP17L10C9JJH3 530 aa12.21□□□□□ -0.45
CLCN4-204ENST00000454850 POTEB2H3BUK9 544 aa12.21□□□□□ -0.45
CLCN4-204ENST00000454850 ZBTB22O15209 634 aa12.21□□□□□ -0.45
CLCN4-204ENST00000454850 ASNSP08243 561 aa12.21□□□□□ -0.45
CLCN4-204ENST00000454850 HOXA7P31268 230 aaPredicted RBP12.21□□□□□ -0.45
CLCN4-204ENST00000454850 ATN1P54259 1190 aaPredicted RBP12.21□□□□□ -0.45
CLCN4-204ENST00000454850 Q3C1V9 767 aa12.21□□□□□ -0.45
CLCN4-204ENST00000454850 ZNF697Q5TEC3 545 aa12.21□□□□□ -0.45
CLCN4-204ENST00000454850 WDR78Q5VTH9 848 aa12.21□□□□□ -0.45
CLCN4-204ENST00000454850 PLEKHH3Q7Z736 793 aa12.21□□□□□ -0.45
CLCN4-204ENST00000454850 MAPKAPK5Q8IW41 473 aa12.21□□□□□ -0.45
CLCN4-204ENST00000454850 CRACR2BQ8N4Y2 399 aaPredicted RBP12.21□□□□□ -0.45
CLCN4-204ENST00000454850 MEIS3Q99687 375 aa12.21□□□□□ -0.45
CLCN4-204ENST00000454850 LRP2BPQ9P2M1 347 aa12.21□□□□□ -0.45
CLCN4-204ENST00000454850 PI4KBQ9UBF8 816 aa12.21□□□□□ -0.45
CLCN4-204ENST00000454850 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.21□□□□□ -0.45
CLCN4-204ENST00000454850 E9PSI1 815 aa12.2□□□□□ -0.46
CLCN4-204ENST00000454850 SRGAP3O43295 1099 aa12.2□□□□□ -0.46
CLCN4-204ENST00000454850 MAP4K4O95819 1239 aaPredicted RBP12.2□□□□□ -0.46
CLCN4-204ENST00000454850 CNGA1P29973 690 aa12.2□□□□□ -0.46
CLCN4-204ENST00000454850 ZYXQ15942 572 aaKnown RBP12.2□□□□□ -0.46
CLCN4-204ENST00000454850 ALDH1L2Q3SY69 923 aa12.2□□□□□ -0.46
CLCN4-204ENST00000454850 MORN1Q5T089 497 aa12.2□□□□□ -0.46
CLCN4-204ENST00000454850 USP6NLQ92738 828 aa12.2□□□□□ -0.46
CLCN4-204ENST00000454850 DNAJC18Q9H819 358 aa12.2□□□□□ -0.46
CLCN4-204ENST00000454850 AATFQ9NY61 560 aaKnown RBP eCLIP12.2□□□□□ -0.46
CLCN4-204ENST00000454850 ZBTB21Q9ULJ3 1066 aa12.2□□□□□ -0.46
CLCN4-204ENST00000454850 ZNFX1Q9P2E3 1918 aaKnown RBP12.19□□□□□ -0.46
CLCN4-204ENST00000454850 C19orf81C9J6K1 198 aa12.19□□□□□ -0.46
CLCN4-204ENST00000454850 MAP2K5Q13163 448 aa12.19□□□□□ -0.46
CLCN4-204ENST00000454850 MFSD14CQ5VZR4 134 aa12.19□□□□□ -0.46
CLCN4-204ENST00000454850 FAM109BQ6ICB4 259 aaPredicted RBP12.19□□□□□ -0.46
CLCN4-204ENST00000454850 TGFBRAP1Q8WUH2 860 aa12.19□□□□□ -0.46
CLCN4-204ENST00000454850 FLRT1Q9NZU1 646 aa12.19□□□□□ -0.46
CLCN4-204ENST00000454850 PRKAG2Q9UGJ0 569 aa12.19□□□□□ -0.46
CLCN4-204ENST00000454850 SAP30BPQ9UHR5 308 aaKnown RBP12.19□□□□□ -0.46
CLCN4-204ENST00000454850 PALD1Q9ULE6 856 aa12.19□□□□□ -0.46
CLCN4-204ENST00000454850 NOB1Q9ULX3 412 aaKnown RBP12.19□□□□□ -0.46
CLCN4-204ENST00000454850 HDAC5Q9UQL6 1122 aa12.19□□□□□ -0.46
CLCN4-204ENST00000454850 SMCHD1A6NHR9 2005 aa12.18□□□□□ -0.46
CLCN4-204ENST00000454850 FLT1P17948 1338 aa12.18□□□□□ -0.46
CLCN4-204ENST00000454850 MYH8P13535 1937 aa12.18□□□□□ -0.46
CLCN4-204ENST00000454850 ARID4AP29374 1257 aaPredicted RBP12.18□□□□□ -0.46
CLCN4-204ENST00000454850 MCAMP43121 646 aa12.18□□□□□ -0.46
CLCN4-204ENST00000454850 RTP1P59025 263 aa12.18□□□□□ -0.46
CLCN4-204ENST00000454850 NAA16Q6N069 864 aaPredicted RBP12.18□□□□□ -0.46
CLCN4-204ENST00000454850 POTEEQ6S8J3 1075 aa12.18□□□□□ -0.46
CLCN4-204ENST00000454850 GTF3C2Q8WUA4 911 aaPredicted RBP12.18□□□□□ -0.46
CLCN4-204ENST00000454850 CDX2Q99626 313 aaPredicted RBP12.18□□□□□ -0.46
CLCN4-204ENST00000454850 FEZ1Q99689 392 aa12.18□□□□□ -0.46
CLCN4-204ENST00000454850 DHX36Q9H2U1 1008 aaKnown RBP12.18□□□□□ -0.46
CLCN4-204ENST00000454850 SNRKQ9NRH2 765 aa12.18□□□□□ -0.46
CLCN4-204ENST00000454850 EMILIN3Q9NT22 766 aa12.18□□□□□ -0.46
CLCN4-204ENST00000454850 ATP11BQ9Y2G3 1177 aa12.18□□□□□ -0.46
CLCN4-204ENST00000454850 GLRX3O76003 335 aaKnown RBP12.17□□□□□ -0.46
CLCN4-204ENST00000454850 BAG3O95817 575 aa12.17□□□□□ -0.46
CLCN4-204ENST00000454850 MYCNP04198 464 aaPredicted RBP12.17□□□□□ -0.46
CLCN4-204ENST00000454850 SLFN5Q08AF3 891 aa12.17□□□□□ -0.46
CLCN4-204ENST00000454850 USP17L2Q6R6M4 530 aa12.17□□□□□ -0.46
CLCN4-204ENST00000454850 MAFAQ8NHW3 353 aaPredicted RBP12.17□□□□□ -0.46
CLCN4-204ENST00000454850 EDC3Q96F86 508 aaKnown RBP12.17□□□□□ -0.46
CLCN4-204ENST00000454850 API5Q9BZZ5 524 aaKnown RBP12.17□□□□□ -0.46
CLCN4-204ENST00000454850 PRDM5Q9NQX1 630 aaPredicted RBP12.17□□□□□ -0.46
CLCN4-204ENST00000454850 DDX20Q9UHI6 824 aaKnown RBP12.17□□□□□ -0.46
CLCN4-204ENST00000454850 CNMDO75829 334 aa12.16□□□□□ -0.46
CLCN4-204ENST00000454850 GH2P01242 217 aa12.16□□□□□ -0.46
CLCN4-204ENST00000454850 HLA-DOAP06340 250 aa12.16□□□□□ -0.46
CLCN4-204ENST00000454850 PLCG2P16885 1265 aa12.16□□□□□ -0.46
CLCN4-204ENST00000454850 CYP2C19P33261 490 aa12.16□□□□□ -0.46
CLCN4-204ENST00000454850 CCNA1P78396 465 aa12.16□□□□□ -0.46
CLCN4-204ENST00000454850 ATP2B2Q01814 1243 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms