RNA–Protein interactions for RNA: ENST00000454252.1

CHEK2-220, Transcript of checkpoint kinase 2, humanhuman

TSL 3

Gene CHEK2, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-220ENST00000454252 FLT1P17948 1338 aa8.67□□□□□ -1.02
CHEK2-220ENST00000454252 BACE1P56817 501 aa8.67□□□□□ -1.02
CHEK2-220ENST00000454252 ZYXQ15942 572 aaKnown RBP8.67□□□□□ -1.02
CHEK2-220ENST00000454252 LRIT3Q3SXY7 679 aa8.67□□□□□ -1.02
CHEK2-220ENST00000454252 GPR142Q7Z601 462 aa8.67□□□□□ -1.02
CHEK2-220ENST00000454252 SLF2Q8IX21 1173 aa8.67□□□□□ -1.02
CHEK2-220ENST00000454252 TRMT2AQ8IZ69 625 aaKnown RBP8.67□□□□□ -1.02
CHEK2-220ENST00000454252 TGFBRAP1Q8WUH2 860 aa8.67□□□□□ -1.02
CHEK2-220ENST00000454252 DOCK2Q92608 1830 aa8.67□□□□□ -1.02
CHEK2-220ENST00000454252 USP6NLQ92738 828 aa8.67□□□□□ -1.02
CHEK2-220ENST00000454252 GUCD1Q96NT3 240 aa8.67□□□□□ -1.02
CHEK2-220ENST00000454252 COL25A1Q9BXS0 654 aaPredicted RBP8.67□□□□□ -1.02
CHEK2-220ENST00000454252 PALD1Q9ULE6 856 aa8.67□□□□□ -1.02
CHEK2-220ENST00000454252 STXBP5LQ9Y2K9 1186 aa8.67□□□□□ -1.02
CHEK2-220ENST00000454252 PRUNE2Q8WUY3 3088 aa8.67□□□□□ -1.02
CHEK2-220ENST00000454252 NPM3O75607 178 aaKnown RBP8.66□□□□□ -1.02
CHEK2-220ENST00000454252 ARID4AP29374 1257 aaPredicted RBP8.66□□□□□ -1.02
CHEK2-220ENST00000454252 ATN1P54259 1190 aaPredicted RBP8.66□□□□□ -1.02
CHEK2-220ENST00000454252 ERVK-9P63128 1117 aa8.66□□□□□ -1.02
CHEK2-220ENST00000454252 ERVK-24P63145 666 aa8.66□□□□□ -1.02
CHEK2-220ENST00000454252 DYNLL1P63167 89 aaKnown RBP8.66□□□□□ -1.02
CHEK2-220ENST00000454252 EVX2Q03828 476 aa8.66□□□□□ -1.02
CHEK2-220ENST00000454252 PABPC4Q13310 644 aaKnown RBP eCLIP8.66□□□□□ -1.02
CHEK2-220ENST00000454252 MORN1Q5T089 497 aa8.66□□□□□ -1.02
CHEK2-220ENST00000454252 GORABQ5T7V8 394 aa8.66□□□□□ -1.02
CHEK2-220ENST00000454252 GPRC5AQ8NFJ5 357 aa8.66□□□□□ -1.02
CHEK2-220ENST00000454252 NUDT12Q9BQG2 462 aa8.66□□□□□ -1.02
CHEK2-220ENST00000454252 WDR18Q9BV38 432 aa8.66□□□□□ -1.02
CHEK2-220ENST00000454252 PIH1D3Q9NQM4 214 aaKnown RBP8.66□□□□□ -1.02
CHEK2-220ENST00000454252 EMILIN3Q9NT22 766 aa8.66□□□□□ -1.02
CHEK2-220ENST00000454252 TMOD4Q9NZQ9 345 aa8.66□□□□□ -1.02
CHEK2-220ENST00000454252 LRP2BPQ9P2M1 347 aa8.66□□□□□ -1.02
CHEK2-220ENST00000454252 ZBTB21Q9ULJ3 1066 aa8.66□□□□□ -1.02
CHEK2-220ENST00000454252 AKAP2Q9Y2D5 859 aa8.66□□□□□ -1.02
CHEK2-220ENST00000454252 CACNA1FO60840 1977 aa8.66□□□□□ -1.02
CHEK2-220ENST00000454252 ALPK3Q96L96 1907 aa8.66□□□□□ -1.02
CHEK2-220ENST00000454252 DOCK1Q14185 1865 aa8.66□□□□□ -1.02
CHEK2-220ENST00000454252 PHIPQ8WWQ0 1821 aa8.66□□□□□ -1.02
CHEK2-220ENST00000454252 MUC3AQ02505 3323 aa8.65□□□□□ -1.02
CHEK2-220ENST00000454252 ZBTB22O15209 634 aa8.65□□□□□ -1.02
CHEK2-220ENST00000454252 GH2P01242 217 aa8.65□□□□□ -1.02
CHEK2-220ENST00000454252 HOXA7P31268 230 aaPredicted RBP8.65□□□□□ -1.02
CHEK2-220ENST00000454252 GSTO1P78417 241 aa8.65□□□□□ -1.02
CHEK2-220ENST00000454252 WDR78Q5VTH9 848 aa8.65□□□□□ -1.02
CHEK2-220ENST00000454252 NAA16Q6N069 864 aaPredicted RBP8.65□□□□□ -1.02
CHEK2-220ENST00000454252 MIGA1Q8NAN2 632 aa8.65□□□□□ -1.02
CHEK2-220ENST00000454252 TRPV1Q8NER1 839 aa8.65□□□□□ -1.02
CHEK2-220ENST00000454252 DBNDD2Q9BQY9 259 aa8.65□□□□□ -1.02
CHEK2-220ENST00000454252 API5Q9BZZ5 524 aaKnown RBP8.65□□□□□ -1.02
CHEK2-220ENST00000454252 AS3MTQ9HBK9 375 aa8.65□□□□□ -1.02
CHEK2-220ENST00000454252 TLR7Q9NYK1 1049 aaKnown RBP8.65□□□□□ -1.02
CHEK2-220ENST00000454252 PI4KBQ9UBF8 816 aa8.65□□□□□ -1.02
CHEK2-220ENST00000454252 HERC5Q9UII4 1024 aaKnown RBP8.65□□□□□ -1.02
CHEK2-220ENST00000454252 COL2A1P02458 1487 aaPredicted RBP8.64□□□□□ -1.03
CHEK2-220ENST00000454252 DDX60LQ5H9U9 1706 aaKnown RBP8.64□□□□□ -1.03
CHEK2-220ENST00000454252 USP17L10C9JJH3 530 aa8.64□□□□□ -1.03
CHEK2-220ENST00000454252 CYP2E1P05181 493 aaPredicted RBP8.64□□□□□ -1.03
CHEK2-220ENST00000454252 LDHCP07864 332 aa8.64□□□□□ -1.03
CHEK2-220ENST00000454252 XRCC5P13010 732 aaKnown RBP8.64□□□□□ -1.03
CHEK2-220ENST00000454252 CYP2C19P33261 490 aa8.64□□□□□ -1.03
CHEK2-220ENST00000454252 RGS2P41220 211 aa8.64□□□□□ -1.03
CHEK2-220ENST00000454252 RARSP54136 660 aaKnown RBP8.64□□□□□ -1.03
CHEK2-220ENST00000454252 MTX1Q13505 466 aa8.64□□□□□ -1.03
CHEK2-220ENST00000454252 PDE3AQ14432 1141 aa8.64□□□□□ -1.03
CHEK2-220ENST00000454252 ANO1Q5XXA6 986 aa8.64□□□□□ -1.03
CHEK2-220ENST00000454252 GPR153Q6NV75 609 aa8.64□□□□□ -1.03
CHEK2-220ENST00000454252 PLEKHH3Q7Z736 793 aa8.64□□□□□ -1.03
CHEK2-220ENST00000454252 CRACR2BQ8N4Y2 399 aaPredicted RBP8.64□□□□□ -1.03
CHEK2-220ENST00000454252 ACER1Q8TDN7 264 aa8.64□□□□□ -1.03
CHEK2-220ENST00000454252 SOCS4Q8WXH5 440 aa8.64□□□□□ -1.03
CHEK2-220ENST00000454252 CLUAP1Q96AJ1 413 aa8.64□□□□□ -1.03
CHEK2-220ENST00000454252 APBA2Q99767 749 aa8.64□□□□□ -1.03
CHEK2-220ENST00000454252 SENP6Q9GZR1 1112 aaPredicted RBP8.64□□□□□ -1.03
CHEK2-220ENST00000454252 C1orf115Q9H7X2 142 aa8.64□□□□□ -1.03
CHEK2-220ENST00000454252 MGAMO43451 1857 aa8.64□□□□□ -1.03
CHEK2-220ENST00000454252 LOC285556D6RIA3 1793 aa8.63□□□□□ -1.03
CHEK2-220ENST00000454252 PTPRFP10586 1907 aa8.63□□□□□ -1.03
CHEK2-220ENST00000454252 ASNSP08243 561 aa8.63□□□□□ -1.03
CHEK2-220ENST00000454252 TRIM27P14373 513 aa8.63□□□□□ -1.03
CHEK2-220ENST00000454252 MAPK4P31152 587 aa8.63□□□□□ -1.03
CHEK2-220ENST00000454252 ZAP70P43403 619 aa8.63□□□□□ -1.03
CHEK2-220ENST00000454252 METTL16Q86W50 562 aaKnown RBP8.63□□□□□ -1.03
CHEK2-220ENST00000454252 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.63□□□□□ -1.03
CHEK2-220ENST00000454252 CCAR1Q8IX12 1150 aaKnown RBP8.63□□□□□ -1.03
CHEK2-220ENST00000454252 NPLOC4Q8TAT6 608 aa8.63□□□□□ -1.03
CHEK2-220ENST00000454252 TBC1D2Q9BYX2 928 aa8.63□□□□□ -1.03
CHEK2-220ENST00000454252 BTBD7Q9P203 1132 aa8.63□□□□□ -1.03
CHEK2-220ENST00000454252 AK9Q5TCS8 1911 aa8.62□□□□□ -1.03
CHEK2-220ENST00000454252 MYH2Q9UKX2 1941 aa8.62□□□□□ -1.03
CHEK2-220ENST00000454252 PLXNB2O15031 1838 aa8.62□□□□□ -1.03
CHEK2-220ENST00000454252 SIPA1L1O43166 1804 aa8.62□□□□□ -1.03
CHEK2-220ENST00000454252 POTEB2H3BUK9 544 aa8.62□□□□□ -1.03
CHEK2-220ENST00000454252 BCAR3O75815 825 aa8.62□□□□□ -1.03
CHEK2-220ENST00000454252 GNAI3P08754 354 aa8.62□□□□□ -1.03
CHEK2-220ENST00000454252 VCAM1P19320 739 aa8.62□□□□□ -1.03
CHEK2-220ENST00000454252 CNGA1P29973 690 aa8.62□□□□□ -1.03
CHEK2-220ENST00000454252 MAP2K5Q13163 448 aa8.62□□□□□ -1.03
CHEK2-220ENST00000454252 G3BP1Q13283 466 aaKnown RBP eCLIP8.62□□□□□ -1.03
CHEK2-220ENST00000454252 RAB3GAP1Q15042 981 aa8.62□□□□□ -1.03
CHEK2-220ENST00000454252 TNNI3KQ59H18 835 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms