RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 P2RX7Q99572 595 aaKnown RBP29.02■■■□□ 2.24
LYSMD2-202ENST00000454181 SAP30BPQ9UHR5 308 aaKnown RBP29.02■■■□□ 2.24
LYSMD2-202ENST00000454181 LOC285556D6RIA3 1793 aa29.02■■■□□ 2.24
LYSMD2-202ENST00000454181 GDF11O95390 407 aa29.01■■■□□ 2.23
LYSMD2-202ENST00000454181 CYP7A1P22680 504 aa29.01■■■□□ 2.23
LYSMD2-202ENST00000454181 ZAP70P43403 619 aa29.01■■■□□ 2.23
LYSMD2-202ENST00000454181 ADGRA1Q86SQ6 560 aa29.01■■■□□ 2.23
LYSMD2-202ENST00000454181 DOCK3Q8IZD9 2030 aa29■■■□□ 2.23
LYSMD2-202ENST00000454181 ATAD5Q96QE3 1844 aa29■■■□□ 2.23
LYSMD2-202ENST00000454181 CYP2B6P20813 491 aa29■■■□□ 2.23
LYSMD2-202ENST00000454181 HERVK_113P62684 666 aa29■■■□□ 2.23
LYSMD2-202ENST00000454181 PDE3AQ14432 1141 aa29■■■□□ 2.23
LYSMD2-202ENST00000454181 METTL16Q86W50 562 aaKnown RBP29■■■□□ 2.23
LYSMD2-202ENST00000454181 NUDT12Q9BQG2 462 aa29■■■□□ 2.23
LYSMD2-202ENST00000454181 PRO3102Q9H379 93 aa29■■■□□ 2.23
LYSMD2-202ENST00000454181 C1orf115Q9H7X2 142 aa29■■■□□ 2.23
LYSMD2-202ENST00000454181 ZBTB21Q9ULJ3 1066 aa29■■■□□ 2.23
LYSMD2-202ENST00000454181 A0A1W2PPC1 479 aa28.99■■■□□ 2.23
LYSMD2-202ENST00000454181 SOCS4Q8WXH5 440 aa28.99■■■□□ 2.23
LYSMD2-202ENST00000454181 DNAJC18Q9H819 358 aa28.99■■■□□ 2.23
LYSMD2-202ENST00000454181 PIH1D3Q9NQM4 214 aaKnown RBP28.99■■■□□ 2.23
LYSMD2-202ENST00000454181 IDH1O75874 414 aaKnown RBP28.98■■■□□ 2.23
LYSMD2-202ENST00000454181 USP5P45974 858 aa28.98■■■□□ 2.23
LYSMD2-202ENST00000454181 JAG1P78504 1218 aa28.98■■■□□ 2.23
LYSMD2-202ENST00000454181 CERS3Q8IU89 383 aa28.98■■■□□ 2.23
LYSMD2-202ENST00000454181 ITPRIPQ8IWB1 547 aa28.98■■■□□ 2.23
LYSMD2-202ENST00000454181 DIS3LQ8TF46 1054 aaKnown RBP28.98■■■□□ 2.23
LYSMD2-202ENST00000454181 GTF3C2Q8WUA4 911 aaPredicted RBP28.98■■■□□ 2.23
LYSMD2-202ENST00000454181 NBPF3Q9H094 633 aa28.98■■■□□ 2.23
LYSMD2-202ENST00000454181 CCDC8Q9H0W5 538 aaPredicted RBP28.98■■■□□ 2.23
LYSMD2-202ENST00000454181 CWC22Q9HCG8 908 aaKnown RBP28.98■■■□□ 2.23
LYSMD2-202ENST00000454181 MAPK4P31152 587 aa28.97■■■□□ 2.23
LYSMD2-202ENST00000454181 DYNLL1P63167 89 aaKnown RBP28.97■■■□□ 2.23
LYSMD2-202ENST00000454181 TRIM32Q13049 653 aa28.97■■■□□ 2.23
LYSMD2-202ENST00000454181 USP17L2Q6R6M4 530 aa28.97■■■□□ 2.23
LYSMD2-202ENST00000454181 STAP2Q9UGK3 403 aa28.97■■■□□ 2.23
LYSMD2-202ENST00000454181 DBNLQ9UJU6 430 aaKnown RBP28.97■■■□□ 2.23
LYSMD2-202ENST00000454181 NOP58Q9Y2X3 529 aaKnown RBP28.97■■■□□ 2.23
LYSMD2-202ENST00000454181 TRMT44Q8IYL2 757 aaKnown RBP28.96■■■□□ 2.23
LYSMD2-202ENST00000454181 TRIB2Q92519 343 aa28.96■■■□□ 2.23
LYSMD2-202ENST00000454181 FEZ1Q99689 392 aa28.96■■■□□ 2.23
LYSMD2-202ENST00000454181 PAGR1Q9BTK6 254 aa28.96■■■□□ 2.23
LYSMD2-202ENST00000454181 C7orf61Q8IZ16 206 aa28.95■■■□□ 2.22
LYSMD2-202ENST00000454181 MIGA1Q8NAN2 632 aa28.95■■■□□ 2.22
LYSMD2-202ENST00000454181 TXNRD2Q9NNW7 524 aa28.95■■■□□ 2.22
LYSMD2-202ENST00000454181 MAST2Q6P0Q8 1798 aa28.95■■■□□ 2.22
LYSMD2-202ENST00000454181 XRCC5P13010 732 aaKnown RBP28.94■■■□□ 2.22
LYSMD2-202ENST00000454181 PRKAR2AP13861 404 aaKnown RBP28.94■■■□□ 2.22
LYSMD2-202ENST00000454181 SHROOM1Q2M3G4 852 aaPredicted RBP28.94■■■□□ 2.22
LYSMD2-202ENST00000454181 C11orf49Q9H6J7 331 aa28.94■■■□□ 2.22
LYSMD2-202ENST00000454181 RBPJLQ9UBG7 517 aa28.94■■■□□ 2.22
LYSMD2-202ENST00000454181 PEX10O60683 326 aa28.93■■■□□ 2.22
LYSMD2-202ENST00000454181 GH2P01242 217 aa28.93■■■□□ 2.22
LYSMD2-202ENST00000454181 ZKSCAN1P17029 563 aaPredicted RBP28.93■■■□□ 2.22
LYSMD2-202ENST00000454181 ERVK-9P63128 1117 aa28.93■■■□□ 2.22
LYSMD2-202ENST00000454181 ERVK-24P63145 666 aa28.93■■■□□ 2.22
LYSMD2-202ENST00000454181 MAP3K12Q12852 859 aa28.93■■■□□ 2.22
LYSMD2-202ENST00000454181 MAGEB6Q8N7X4 407 aa28.93■■■□□ 2.22
LYSMD2-202ENST00000454181 TLR7Q9NYK1 1049 aaKnown RBP28.93■■■□□ 2.22
LYSMD2-202ENST00000454181 RGS2P41220 211 aa28.92■■■□□ 2.22
LYSMD2-202ENST00000454181 TTC6Q86TZ1 520 aa28.92■■■□□ 2.22
LYSMD2-202ENST00000454181 EAF2Q96CJ1 260 aaPredicted RBP28.92■■■□□ 2.22
LYSMD2-202ENST00000454181 EMILIN3Q9NT22 766 aa28.92■■■□□ 2.22
LYSMD2-202ENST00000454181 OGDHLQ9ULD0 1010 aa28.92■■■□□ 2.22
LYSMD2-202ENST00000454181 RANBP2P49792 3224 aaKnown RBP28.91■■■□□ 2.22
LYSMD2-202ENST00000454181 PLEKHH3Q7Z736 793 aa28.91■■■□□ 2.22
LYSMD2-202ENST00000454181 SERPINB13Q9UIV8 391 aa28.91■■■□□ 2.22
LYSMD2-202ENST00000454181 SIPA1L1O43166 1804 aa28.9■■■□□ 2.22
LYSMD2-202ENST00000454181 GLRX3O76003 335 aaKnown RBP28.9■■■□□ 2.22
LYSMD2-202ENST00000454181 RAB3GAP1Q15042 981 aa28.9■■■□□ 2.22
LYSMD2-202ENST00000454181 ZYXQ15942 572 aaKnown RBP28.9■■■□□ 2.22
LYSMD2-202ENST00000454181 Q3C1V9 767 aa28.9■■■□□ 2.22
LYSMD2-202ENST00000454181 MAP3K21Q5TCX8 1036 aa28.9■■■□□ 2.22
LYSMD2-202ENST00000454181 TMED8Q6PL24 325 aaPredicted RBP28.9■■■□□ 2.22
LYSMD2-202ENST00000454181 GPR142Q7Z601 462 aa28.9■■■□□ 2.22
LYSMD2-202ENST00000454181 ERC1Q8IUD2 1116 aa28.9■■■□□ 2.22
LYSMD2-202ENST00000454181 ZMYND8Q9ULU4 1186 aaPredicted RBP28.9■■■□□ 2.22
LYSMD2-202ENST00000454181 USP17L15C9J2P7 530 aa28.89■■■□□ 2.22
LYSMD2-202ENST00000454181 USP17L13C9JLJ4 530 aa28.89■■■□□ 2.22
LYSMD2-202ENST00000454181 USP17L11C9JVI0 530 aa28.89■■■□□ 2.22
LYSMD2-202ENST00000454181 USP17L18D6R9N7 530 aa28.89■■■□□ 2.22
LYSMD2-202ENST00000454181 USP17L22D6RA61 530 aa28.89■■■□□ 2.22
LYSMD2-202ENST00000454181 USP17L17D6RBQ6 530 aa28.89■■■□□ 2.22
LYSMD2-202ENST00000454181 USP17L19D6RCP7 530 aa28.89■■■□□ 2.22
LYSMD2-202ENST00000454181 USP17L20D6RJB6 530 aa28.89■■■□□ 2.22
LYSMD2-202ENST00000454181 USP14P54578 494 aa28.89■■■□□ 2.22
LYSMD2-202ENST00000454181 CCNA1P78396 465 aa28.89■■■□□ 2.22
LYSMD2-202ENST00000454181 USP17L24Q0WX57 530 aa28.89■■■□□ 2.22
LYSMD2-202ENST00000454181 PORCNQ9H237 461 aa28.89■■■□□ 2.22
LYSMD2-202ENST00000454181 CABP5Q9NP86 173 aa28.89■■■□□ 2.22
LYSMD2-202ENST00000454181 HNRNPUQ00839 825 aaKnown RBP eCLIP28.88■■■□□ 2.21
LYSMD2-202ENST00000454181 CERKLQ49MI3 558 aaPredicted RBP28.88■■■□□ 2.21
LYSMD2-202ENST00000454181 TATDN1Q6P1N9 297 aa28.88■■■□□ 2.21
LYSMD2-202ENST00000454181 AACSQ86V21 672 aa28.88■■■□□ 2.21
LYSMD2-202ENST00000454181 EHD4Q9H223 541 aa28.88■■■□□ 2.21
LYSMD2-202ENST00000454181 ABCB5Q2M3G0 1257 aa28.87■■■□□ 2.21
LYSMD2-202ENST00000454181 WDR78Q5VTH9 848 aa28.87■■■□□ 2.21
LYSMD2-202ENST00000454181 RABGAP1Q9Y3P9 1069 aa28.87■■■□□ 2.21
LYSMD2-202ENST00000454181 NDUFB9Q9Y6M9 179 aa28.87■■■□□ 2.21
LYSMD2-202ENST00000454181 CACNB2Q08289 660 aaPredicted RBP28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms