RNA–Protein interactions for RNA: ENST00000454040.5

PCGEM1-201, PCGEM1, prostate-specific transcript, humanhuman

TSL 1 (best) BASIC

Gene PCGEM1, Length 1,590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGEM1-201ENST00000454040 HCLS1P14317 486 aaPredicted RBP6.8□□□□□ -1.32
PCGEM1-201ENST00000454040 ETFBP38117 255 aa6.8□□□□□ -1.32
PCGEM1-201ENST00000454040 CDKN1CP49918 316 aaPredicted RBP6.8□□□□□ -1.32
PCGEM1-201ENST00000454040 CHMP4BP1P59074 171 aa6.8□□□□□ -1.32
PCGEM1-201ENST00000454040 DHX8Q14562 1220 aaKnown RBP6.8□□□□□ -1.32
PCGEM1-201ENST00000454040 CCSAPQ6IQ19 270 aaPredicted RBP6.8□□□□□ -1.32
PCGEM1-201ENST00000454040 LRRC69Q6ZNQ3 347 aa6.8□□□□□ -1.32
PCGEM1-201ENST00000454040 ANKS3Q6ZW76 656 aa6.8□□□□□ -1.32
PCGEM1-201ENST00000454040 NLRP13Q86W25 1043 aa6.8□□□□□ -1.32
PCGEM1-201ENST00000454040 WDR75Q8IWA0 830 aaKnown RBP6.8□□□□□ -1.32
PCGEM1-201ENST00000454040 LILRB2Q8N423 598 aa6.8□□□□□ -1.32
PCGEM1-201ENST00000454040 SENP7Q9BQF6 1050 aa6.8□□□□□ -1.32
PCGEM1-201ENST00000454040 FAM126AQ9BYI3 521 aaPredicted RBP6.8□□□□□ -1.32
PCGEM1-201ENST00000454040 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.8□□□□□ -1.32
PCGEM1-201ENST00000454040 KIF1BO60333 1816 aa6.8□□□□□ -1.32
PCGEM1-201ENST00000454040 INO80Q9ULG1 1556 aaPredicted RBP6.8□□□□□ -1.32
PCGEM1-201ENST00000454040 ZFYVE16Q7Z3T8 1539 aa6.8□□□□□ -1.32
PCGEM1-201ENST00000454040 FANCIQ9NVI1 1328 aa6.79□□□□□ -1.32
PCGEM1-201ENST00000454040 DBX1A6NMT0 343 aa6.79□□□□□ -1.32
PCGEM1-201ENST00000454040 RGS9O75916 674 aaPredicted RBP6.79□□□□□ -1.32
PCGEM1-201ENST00000454040 SCNN1DP51172 638 aa6.79□□□□□ -1.32
PCGEM1-201ENST00000454040 GDF10P55107 478 aa6.79□□□□□ -1.32
PCGEM1-201ENST00000454040 JAMLQ86YT9 394 aa6.79□□□□□ -1.32
PCGEM1-201ENST00000454040 AMOTL1Q8IY63 956 aa6.79□□□□□ -1.32
PCGEM1-201ENST00000454040 APBA2Q99767 749 aa6.79□□□□□ -1.32
PCGEM1-201ENST00000454040 UBE2OQ9C0C9 1292 aaKnown RBP6.79□□□□□ -1.32
PCGEM1-201ENST00000454040 HOMER2Q9NSB8 354 aa6.79□□□□□ -1.32
PCGEM1-201ENST00000454040 CABP1Q9NZU7 370 aa6.79□□□□□ -1.32
PCGEM1-201ENST00000454040 MADDQ8WXG6 1647 aa6.79□□□□□ -1.32
PCGEM1-201ENST00000454040 KANK1Q14678 1352 aa6.79□□□□□ -1.32
PCGEM1-201ENST00000454040 SPAG9O60271 1321 aaKnown RBP6.78□□□□□ -1.32
PCGEM1-201ENST00000454040 TMF1P82094 1093 aa6.78□□□□□ -1.32
PCGEM1-201ENST00000454040 BRDTQ58F21 947 aaPredicted RBP6.78□□□□□ -1.32
PCGEM1-201ENST00000454040 SYCP2LQ5T4T6 812 aa6.78□□□□□ -1.32
PCGEM1-201ENST00000454040 PSAPL1Q6NUJ1 521 aa6.78□□□□□ -1.32
PCGEM1-201ENST00000454040 RASGRP4Q8TDF6 673 aa6.78□□□□□ -1.32
PCGEM1-201ENST00000454040 ZNF512BQ96KM6 892 aaPredicted RBP6.78□□□□□ -1.32
PCGEM1-201ENST00000454040 MPHOSPH6Q99547 160 aaKnown RBP6.78□□□□□ -1.32
PCGEM1-201ENST00000454040 GPC6Q9Y625 555 aaPredicted RBP6.78□□□□□ -1.32
PCGEM1-201ENST00000454040 CFAP74Q9C0B2 1584 aa6.78□□□□□ -1.32
PCGEM1-201ENST00000454040 RAB33AQ14088 237 aa6.78□□□□□ -1.32
PCGEM1-201ENST00000454040 ARSHQ5FYA8 562 aa6.78□□□□□ -1.32
PCGEM1-201ENST00000454040 CXorf38Q8TB03 319 aa6.78□□□□□ -1.32
PCGEM1-201ENST00000454040 APPBP2Q92624 585 aa6.78□□□□□ -1.32
PCGEM1-201ENST00000454040 RELTQ969Z4 430 aa6.78□□□□□ -1.32
PCGEM1-201ENST00000454040 TESK2Q96S53 571 aa6.78□□□□□ -1.32
PCGEM1-201ENST00000454040 CEP89Q96ST8 783 aa6.78□□□□□ -1.32
PCGEM1-201ENST00000454040 ANP32EQ9BTT0 268 aa6.78□□□□□ -1.32
PCGEM1-201ENST00000454040 COPRSQ9NQ92 184 aa6.78□□□□□ -1.32
PCGEM1-201ENST00000454040 STOML1Q9UBI4 398 aa6.78□□□□□ -1.32
PCGEM1-201ENST00000454040 SWAP70Q9UH65 585 aa6.78□□□□□ -1.32
PCGEM1-201ENST00000454040 FBXO9Q9UK97 447 aaPredicted RBP6.78□□□□□ -1.32
PCGEM1-201ENST00000454040 MRVI1Q9Y6F6 885 aa6.78□□□□□ -1.32
PCGEM1-201ENST00000454040 ATP7AQ04656 1500 aa6.77□□□□□ -1.32
PCGEM1-201ENST00000454040 TRAPPC8Q9Y2L5 1435 aa6.77□□□□□ -1.33
PCGEM1-201ENST00000454040 SSBP05455 408 aaKnown RBP eCLIP6.77□□□□□ -1.33
PCGEM1-201ENST00000454040 TBC1D8BQ0IIM8 1120 aa6.77□□□□□ -1.33
PCGEM1-201ENST00000454040 TKFCQ3LXA3 575 aa6.77□□□□□ -1.33
PCGEM1-201ENST00000454040 TMEM130Q8N3G9 435 aa6.77□□□□□ -1.33
PCGEM1-201ENST00000454040 HNRNPLLQ8WVV9 542 aaKnown RBP6.77□□□□□ -1.33
PCGEM1-201ENST00000454040 TMX1Q9H3N1 280 aa6.77□□□□□ -1.33
PCGEM1-201ENST00000454040 IFT172Q9UG01 1749 aa6.77□□□□□ -1.33
PCGEM1-201ENST00000454040 NPC1L1Q9UHC9 1359 aa6.76□□□□□ -1.33
PCGEM1-201ENST00000454040 SYNMO15061 1565 aa6.76□□□□□ -1.33
PCGEM1-201ENST00000454040 CCDC85CA6NKD9 419 aa6.76□□□□□ -1.33
PCGEM1-201ENST00000454040 TSPAN6O43657 245 aa6.76□□□□□ -1.33
PCGEM1-201ENST00000454040 ZRANB2O95218 330 aaKnown RBP eCLIP6.76□□□□□ -1.33
PCGEM1-201ENST00000454040 HSP90AA1P07900 732 aaKnown RBP6.76□□□□□ -1.33
PCGEM1-201ENST00000454040 POU3F3P20264 500 aaPredicted RBP6.76□□□□□ -1.33
PCGEM1-201ENST00000454040 KCNQ4P56696 695 aa6.76□□□□□ -1.33
PCGEM1-201ENST00000454040 SAFB2Q14151 953 aaKnown RBP eCLIP6.76□□□□□ -1.33
PCGEM1-201ENST00000454040 LRRC41Q15345 812 aa6.76□□□□□ -1.33
PCGEM1-201ENST00000454040 MTFR1Q15390 333 aa6.76□□□□□ -1.33
PCGEM1-201ENST00000454040 ABI1Q8IZP0 508 aa6.76□□□□□ -1.33
PCGEM1-201ENST00000454040 ARPC5LQ9BPX5 153 aa6.76□□□□□ -1.33
PCGEM1-201ENST00000454040 USP31Q70CQ4 1352 aa6.76□□□□□ -1.33
PCGEM1-201ENST00000454040 LMTK2Q8IWU2 1503 aa6.75□□□□□ -1.33
PCGEM1-201ENST00000454040 FANCAO15360 1455 aa6.75□□□□□ -1.33
PCGEM1-201ENST00000454040 SCAF11Q99590 1463 aaKnown RBP6.75□□□□□ -1.33
PCGEM1-201ENST00000454040 CLTCL1P53675 1640 aa6.75□□□□□ -1.33
PCGEM1-201ENST00000454040 KIF3BO15066 747 aa6.75□□□□□ -1.33
PCGEM1-201ENST00000454040 FOXO3O43524 673 aa6.75□□□□□ -1.33
PCGEM1-201ENST00000454040 FGAP02671 866 aa6.75□□□□□ -1.33
PCGEM1-201ENST00000454040 IGFBP4P22692 258 aa6.75□□□□□ -1.33
PCGEM1-201ENST00000454040 COPB2P35606 906 aa6.75□□□□□ -1.33
PCGEM1-201ENST00000454040 TXLNAP40222 546 aa6.75□□□□□ -1.33
PCGEM1-201ENST00000454040 NASPP49321 788 aaPredicted RBP6.75□□□□□ -1.33
PCGEM1-201ENST00000454040 SQSTM1Q13501 440 aa6.75□□□□□ -1.33
PCGEM1-201ENST00000454040 NFE2Q16621 373 aaPredicted RBP6.75□□□□□ -1.33
PCGEM1-201ENST00000454040 RGL3Q3MIN7 710 aa6.75□□□□□ -1.33
PCGEM1-201ENST00000454040 MEI1Q5TIA1 1274 aa6.75□□□□□ -1.33
PCGEM1-201ENST00000454040 TTC39BQ5VTQ0 682 aaPredicted RBP6.75□□□□□ -1.33
PCGEM1-201ENST00000454040 ZNF280DQ6N043 979 aa6.75□□□□□ -1.33
PCGEM1-201ENST00000454040 ZNF622Q969S3 477 aaKnown RBP eCLIP6.75□□□□□ -1.33
PCGEM1-201ENST00000454040 SEC16BQ96JE7 1060 aa6.75□□□□□ -1.33
PCGEM1-201ENST00000454040 DNAJC7Q99615 494 aa6.75□□□□□ -1.33
PCGEM1-201ENST00000454040 TRIM55Q9BYV6 548 aa6.75□□□□□ -1.33
PCGEM1-201ENST00000454040 ARNT2Q9HBZ2 717 aa6.75□□□□□ -1.33
PCGEM1-201ENST00000454040 EIF3AQ14152 1382 aaKnown RBP6.75□□□□□ -1.33
PCGEM1-201ENST00000454040 MYOM2P54296 1465 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms