RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 ZBTB48P10074 688 aaPredicted RBP17.37■□□□□ 0.37
NCKIPSD-207ENST00000453349 PTPRAP18433 802 aa17.37■□□□□ 0.37
NCKIPSD-207ENST00000453349 MKRN3Q13064 507 aaKnown RBP17.37■□□□□ 0.37
NCKIPSD-207ENST00000453349 RRP1BQ14684 758 aaKnown RBP17.37■□□□□ 0.37
NCKIPSD-207ENST00000453349 IMMTQ16891 758 aaKnown RBP17.37■□□□□ 0.37
NCKIPSD-207ENST00000453349 ABCB5Q2M3G0 1257 aa17.37■□□□□ 0.37
NCKIPSD-207ENST00000453349 OTUD5Q96G74 571 aa17.37■□□□□ 0.37
NCKIPSD-207ENST00000453349 ANAPC4Q9UJX5 808 aa17.37■□□□□ 0.37
NCKIPSD-207ENST00000453349 SIPA1L1O43166 1804 aa17.37■□□□□ 0.37
NCKIPSD-207ENST00000453349 USP17L5A8MUK1 530 aa17.36■□□□□ 0.37
NCKIPSD-207ENST00000453349 SMIM22K7EJ46 135 aa17.36■□□□□ 0.37
NCKIPSD-207ENST00000453349 MPHOSPH10O00566 681 aaKnown RBP17.36■□□□□ 0.37
NCKIPSD-207ENST00000453349 MAP2K2P36507 400 aa17.36■□□□□ 0.37
NCKIPSD-207ENST00000453349 PTH1RQ03431 593 aa17.36■□□□□ 0.37
NCKIPSD-207ENST00000453349 CTDSPL2Q05D32 466 aa17.36■□□□□ 0.37
NCKIPSD-207ENST00000453349 SLC44A5Q8NCS7 719 aa17.36■□□□□ 0.37
NCKIPSD-207ENST00000453349 TBC1D2Q9BYX2 928 aa17.36■□□□□ 0.37
NCKIPSD-207ENST00000453349 AS3MTQ9HBK9 375 aa17.36■□□□□ 0.37
NCKIPSD-207ENST00000453349 ZHX2Q9Y6X8 837 aa17.36■□□□□ 0.37
NCKIPSD-207ENST00000453349 U3KPZ7 1027 aaPredicted RBP17.36■□□□□ 0.37
NCKIPSD-207ENST00000453349 AOC2O75106 756 aa17.35■□□□□ 0.37
NCKIPSD-207ENST00000453349 GH2P01242 217 aa17.35■□□□□ 0.37
NCKIPSD-207ENST00000453349 PPIL2Q13356 520 aa17.35■□□□□ 0.37
NCKIPSD-207ENST00000453349 REM2Q8IYK8 340 aaPredicted RBP17.35■□□□□ 0.37
NCKIPSD-207ENST00000453349 CNKSR2Q8WXI2 1034 aa17.35■□□□□ 0.37
NCKIPSD-207ENST00000453349 MAP4K1Q92918 833 aa17.35■□□□□ 0.37
NCKIPSD-207ENST00000453349 ANO2Q9NQ90 1003 aa17.35■□□□□ 0.37
NCKIPSD-207ENST00000453349 ROBO3Q96MS0 1386 aa17.35■□□□□ 0.37
NCKIPSD-207ENST00000453349 GTF2A2P52657 109 aa17.34■□□□□ 0.37
NCKIPSD-207ENST00000453349 INHBEP58166 350 aa17.34■□□□□ 0.37
NCKIPSD-207ENST00000453349 HAND2P61296 217 aa17.34■□□□□ 0.37
NCKIPSD-207ENST00000453349 KIF23Q02241 960 aaPredicted RBP17.34■□□□□ 0.37
NCKIPSD-207ENST00000453349 RAB3GAP1Q15042 981 aa17.34■□□□□ 0.37
NCKIPSD-207ENST00000453349 OTOFQ9HC10 1997 aa17.34■□□□□ 0.37
NCKIPSD-207ENST00000453349 ZBTB21Q9ULJ3 1066 aa17.34■□□□□ 0.37
NCKIPSD-207ENST00000453349 MANSC4A6NHS7 340 aaPredicted RBP17.33■□□□□ 0.36
NCKIPSD-207ENST00000453349 PCP11498 1178 aaKnown RBP17.33■□□□□ 0.36
NCKIPSD-207ENST00000453349 GJA5P36382 358 aa17.33■□□□□ 0.36
NCKIPSD-207ENST00000453349 JAG1P78504 1218 aa17.33■□□□□ 0.36
NCKIPSD-207ENST00000453349 MFSD6Q6ZSS7 791 aa17.33■□□□□ 0.36
NCKIPSD-207ENST00000453349 TMEM179Q6ZVK1 233 aa17.33■□□□□ 0.36
NCKIPSD-207ENST00000453349 RNF41Q9H4P4 317 aaPredicted RBP17.33■□□□□ 0.36
NCKIPSD-207ENST00000453349 TOMM22Q9NS69 142 aa17.33■□□□□ 0.36
NCKIPSD-207ENST00000453349 AFG3L2Q9Y4W6 797 aa17.33■□□□□ 0.36
NCKIPSD-207ENST00000453349 LAMB1P07942 1786 aa17.33■□□□□ 0.36
NCKIPSD-207ENST00000453349 CXCL11O14625 94 aa17.32■□□□□ 0.36
NCKIPSD-207ENST00000453349 IRF6O14896 467 aa17.32■□□□□ 0.36
NCKIPSD-207ENST00000453349 PRDM1O75626 825 aa17.32■□□□□ 0.36
NCKIPSD-207ENST00000453349 AKR1B1P15121 316 aa17.32■□□□□ 0.36
NCKIPSD-207ENST00000453349 RASA1P20936 1047 aa17.32■□□□□ 0.36
NCKIPSD-207ENST00000453349 SREBF2Q12772 1141 aa17.32■□□□□ 0.36
NCKIPSD-207ENST00000453349 SNAPC2Q13487 334 aa17.32■□□□□ 0.36
NCKIPSD-207ENST00000453349 AKNAD1Q5T1N1 836 aa17.32■□□□□ 0.36
NCKIPSD-207ENST00000453349 LSG1Q9H089 658 aaKnown RBP17.32■□□□□ 0.36
NCKIPSD-207ENST00000453349 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.32■□□□□ 0.36
NCKIPSD-207ENST00000453349 RBM8AQ9Y5S9 174 aaKnown RBP17.32■□□□□ 0.36
NCKIPSD-207ENST00000453349 DOCK1Q14185 1865 aa17.32■□□□□ 0.36
NCKIPSD-207ENST00000453349 EIF5BO60841 1220 aaKnown RBP17.31■□□□□ 0.36
NCKIPSD-207ENST00000453349 REC8O95072 547 aa17.31■□□□□ 0.36
NCKIPSD-207ENST00000453349 TSPY3P0CV98 308 aa17.31■□□□□ 0.36
NCKIPSD-207ENST00000453349 TSPY8P0CW00 308 aa17.31■□□□□ 0.36
NCKIPSD-207ENST00000453349 CETPP11597 493 aa17.31■□□□□ 0.36
NCKIPSD-207ENST00000453349 TFAP4Q01664 338 aa17.31■□□□□ 0.36
NCKIPSD-207ENST00000453349 SPP2Q13103 211 aa17.31■□□□□ 0.36
NCKIPSD-207ENST00000453349 SEPT2Q15019 361 aa17.31■□□□□ 0.36
NCKIPSD-207ENST00000453349 SHROOM1Q2M3G4 852 aaPredicted RBP17.31■□□□□ 0.36
NCKIPSD-207ENST00000453349 RRP12Q5JTH9 1297 aaKnown RBP17.31■□□□□ 0.36
NCKIPSD-207ENST00000453349 ZNF280CQ8ND82 737 aa17.31■□□□□ 0.36
NCKIPSD-207ENST00000453349 STAG1Q8WVM7 1258 aa17.31■□□□□ 0.36
NCKIPSD-207ENST00000453349 WDR18Q9BV38 432 aa17.31■□□□□ 0.36
NCKIPSD-207ENST00000453349 INCENPQ9NQS7 918 aa17.31■□□□□ 0.36
NCKIPSD-207ENST00000453349 TRIM75PA6NK02 468 aa17.3■□□□□ 0.36
NCKIPSD-207ENST00000453349 TSPY2A6NKD2 308 aa17.3■□□□□ 0.36
NCKIPSD-207ENST00000453349 USP17L10C9JJH3 530 aa17.3■□□□□ 0.36
NCKIPSD-207ENST00000453349 ORC4O43929 436 aa17.3■□□□□ 0.36
NCKIPSD-207ENST00000453349 RANBP6O60518 1105 aaKnown RBP17.3■□□□□ 0.36
NCKIPSD-207ENST00000453349 FGRP09769 529 aa17.3■□□□□ 0.36
NCKIPSD-207ENST00000453349 TM4SF4P48230 202 aa17.3■□□□□ 0.36
NCKIPSD-207ENST00000453349 MAP2K1Q02750 393 aaPredicted RBP17.3■□□□□ 0.36
NCKIPSD-207ENST00000453349 OTUD7BQ6GQQ9 843 aa17.3■□□□□ 0.36
NCKIPSD-207ENST00000453349 CCDC84Q86UT8 332 aaPredicted RBP17.3■□□□□ 0.36
NCKIPSD-207ENST00000453349 MS4A4AQ96JQ5 239 aa17.3■□□□□ 0.36
NCKIPSD-207ENST00000453349 ZIC5Q96T25 663 aa17.3■□□□□ 0.36
NCKIPSD-207ENST00000453349 KANSL2Q9H9L4 492 aa17.3■□□□□ 0.36
NCKIPSD-207ENST00000453349 KCNH4Q9UQ05 1017 aa17.3■□□□□ 0.36
NCKIPSD-207ENST00000453349 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.3■□□□□ 0.36
NCKIPSD-207ENST00000453349 ATAD5Q96QE3 1844 aa17.3■□□□□ 0.36
NCKIPSD-207ENST00000453349 C19orf81C9J6K1 198 aa17.29■□□□□ 0.36
NCKIPSD-207ENST00000453349 CYP21A2P08686 494 aa17.29■□□□□ 0.36
NCKIPSD-207ENST00000453349 GUCY1A2P33402 732 aa17.29■□□□□ 0.36
NCKIPSD-207ENST00000453349 NT5C2P49902 561 aa17.29■□□□□ 0.36
NCKIPSD-207ENST00000453349 FAM47AQ5JRC9 791 aa17.29■□□□□ 0.36
NCKIPSD-207ENST00000453349 FASTKD5Q7L8L6 764 aaKnown RBP17.29■□□□□ 0.36
NCKIPSD-207ENST00000453349 BEGAINQ9BUH8 593 aa17.29■□□□□ 0.36
NCKIPSD-207ENST00000453349 KRT23Q9C075 422 aa17.29■□□□□ 0.36
NCKIPSD-207ENST00000453349 CNNM2Q9H8M5 875 aa17.29■□□□□ 0.36
NCKIPSD-207ENST00000453349 ARHGEF10LQ9HCE6 1279 aa17.29■□□□□ 0.36
NCKIPSD-207ENST00000453349 MYH8P13535 1937 aa17.28■□□□□ 0.36
NCKIPSD-207ENST00000453349 CCL15-CCL14A0A0B4J2E2 113 aa17.28■□□□□ 0.36
NCKIPSD-207ENST00000453349 TESPA1A2RU30 521 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms