RNA–Protein interactions for RNA: ENST00000453341.1

TNFRSF25-208, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-208ENST00000453341 PORCNQ9H237 461 aa26.88■■□□□ 1.89
TNFRSF25-208ENST00000453341 SMC4Q9NTJ3 1288 aa26.88■■□□□ 1.89
TNFRSF25-208ENST00000453341 E9PSI1 815 aa26.87■■□□□ 1.89
TNFRSF25-208ENST00000453341 GSTO1P78417 241 aa26.87■■□□□ 1.89
TNFRSF25-208ENST00000453341 TRMT44Q8IYL2 757 aaKnown RBP26.87■■□□□ 1.89
TNFRSF25-208ENST00000453341 SPATA5Q8NB90 893 aa26.87■■□□□ 1.89
TNFRSF25-208ENST00000453341 SH3RF3Q8TEJ3 882 aaPredicted RBP26.87■■□□□ 1.89
TNFRSF25-208ENST00000453341 TMOD4Q9NZQ9 345 aa26.87■■□□□ 1.89
TNFRSF25-208ENST00000453341 MAPK4P31152 587 aa26.86■■□□□ 1.89
TNFRSF25-208ENST00000453341 PDE3AQ14432 1141 aa26.86■■□□□ 1.89
TNFRSF25-208ENST00000453341 MORN1Q5T089 497 aa26.86■■□□□ 1.89
TNFRSF25-208ENST00000453341 GPR142Q7Z601 462 aa26.86■■□□□ 1.89
TNFRSF25-208ENST00000453341 MEIS3Q99687 375 aa26.86■■□□□ 1.89
TNFRSF25-208ENST00000453341 DNAJC18Q9H819 358 aa26.86■■□□□ 1.89
TNFRSF25-208ENST00000453341 RAI14Q9P0K7 980 aa26.86■■□□□ 1.89
TNFRSF25-208ENST00000453341 PI4KBQ9UBF8 816 aa26.86■■□□□ 1.89
TNFRSF25-208ENST00000453341 AKAP2Q9Y2D5 859 aa26.86■■□□□ 1.89
TNFRSF25-208ENST00000453341 MAST2Q6P0Q8 1798 aa26.85■■□□□ 1.89
TNFRSF25-208ENST00000453341 ERVK-9P63128 1117 aa26.85■■□□□ 1.89
TNFRSF25-208ENST00000453341 ERVK-24P63145 666 aa26.85■■□□□ 1.89
TNFRSF25-208ENST00000453341 FAM109BQ6ICB4 259 aaPredicted RBP26.85■■□□□ 1.89
TNFRSF25-208ENST00000453341 ASNSP08243 561 aa26.84■■□□□ 1.89
TNFRSF25-208ENST00000453341 RGS2P41220 211 aa26.84■■□□□ 1.89
TNFRSF25-208ENST00000453341 SLFN5Q08AF3 891 aa26.84■■□□□ 1.89
TNFRSF25-208ENST00000453341 FAM161BQ96MY7 647 aa26.84■■□□□ 1.89
TNFRSF25-208ENST00000453341 NEUROD6Q96NK8 337 aa26.84■■□□□ 1.89
TNFRSF25-208ENST00000453341 TTC28Q96AY4 2481 aa26.83■■□□□ 1.89
TNFRSF25-208ENST00000453341 CDK5RAP2Q96SN8 1893 aa26.83■■□□□ 1.89
TNFRSF25-208ENST00000453341 APBA2Q99767 749 aa26.83■■□□□ 1.89
TNFRSF25-208ENST00000453341 NOB1Q9ULX3 412 aaKnown RBP26.83■■□□□ 1.89
TNFRSF25-208ENST00000453341 C19orf81C9J6K1 198 aa26.82■■□□□ 1.88
TNFRSF25-208ENST00000453341 USP17L10C9JJH3 530 aa26.82■■□□□ 1.88
TNFRSF25-208ENST00000453341 GDF11O95390 407 aa26.82■■□□□ 1.88
TNFRSF25-208ENST00000453341 ARID4AP29374 1257 aaPredicted RBP26.82■■□□□ 1.88
TNFRSF25-208ENST00000453341 PLEKHH3Q7Z736 793 aa26.82■■□□□ 1.88
TNFRSF25-208ENST00000453341 PAGR1Q9BTK6 254 aa26.82■■□□□ 1.88
TNFRSF25-208ENST00000453341 CDH23Q9H251 3354 aa26.81■■□□□ 1.88
TNFRSF25-208ENST00000453341 MCAMP43121 646 aa26.81■■□□□ 1.88
TNFRSF25-208ENST00000453341 METTL16Q86W50 562 aaKnown RBP26.81■■□□□ 1.88
TNFRSF25-208ENST00000453341 DHX36Q9H2U1 1008 aaKnown RBP26.81■■□□□ 1.88
TNFRSF25-208ENST00000453341 HDAC5Q9UQL6 1122 aa26.81■■□□□ 1.88
TNFRSF25-208ENST00000453341 SRGAP3O43295 1099 aa26.8■■□□□ 1.88
TNFRSF25-208ENST00000453341 EMILIN3Q9NT22 766 aa26.8■■□□□ 1.88
TNFRSF25-208ENST00000453341 AATFQ9NY61 560 aaKnown RBP eCLIP26.8■■□□□ 1.88
TNFRSF25-208ENST00000453341 FLRT1Q9NZU1 646 aa26.8■■□□□ 1.88
TNFRSF25-208ENST00000453341 FOCADQ5VW36 1801 aa26.8■■□□□ 1.88
TNFRSF25-208ENST00000453341 MAPKAPK5Q8IW41 473 aa26.79■■□□□ 1.88
TNFRSF25-208ENST00000453341 CCAR1Q8IX12 1150 aaKnown RBP26.79■■□□□ 1.88
TNFRSF25-208ENST00000453341 SENP6Q9GZR1 1112 aaPredicted RBP26.79■■□□□ 1.88
TNFRSF25-208ENST00000453341 ZBTB21Q9ULJ3 1066 aa26.79■■□□□ 1.88
TNFRSF25-208ENST00000453341 LTBP2Q14767 1821 aa26.79■■□□□ 1.88
TNFRSF25-208ENST00000453341 CNMDO75829 334 aa26.78■■□□□ 1.88
TNFRSF25-208ENST00000453341 MAP2K5Q13163 448 aa26.78■■□□□ 1.88
TNFRSF25-208ENST00000453341 GTF3C2Q8WUA4 911 aaPredicted RBP26.78■■□□□ 1.88
TNFRSF25-208ENST00000453341 TGFBRAP1Q8WUH2 860 aa26.78■■□□□ 1.88
TNFRSF25-208ENST00000453341 CDCA7LQ96GN5 454 aa26.78■■□□□ 1.88
TNFRSF25-208ENST00000453341 LRP2BPQ9P2M1 347 aa26.78■■□□□ 1.88
TNFRSF25-208ENST00000453341 FLT1P17948 1338 aa26.78■■□□□ 1.88
TNFRSF25-208ENST00000453341 MTX1Q13505 466 aa26.77■■□□□ 1.88
TNFRSF25-208ENST00000453341 GORABQ5T7V8 394 aa26.77■■□□□ 1.88
TNFRSF25-208ENST00000453341 ADGRA1Q86SQ6 560 aa26.77■■□□□ 1.88
TNFRSF25-208ENST00000453341 NDUFB9Q9Y6M9 179 aa26.77■■□□□ 1.88
TNFRSF25-208ENST00000453341 ATN1P54259 1190 aaPredicted RBP26.76■■□□□ 1.87
TNFRSF25-208ENST00000453341 FOXP4Q8IVH2 680 aaPredicted RBP26.76■■□□□ 1.87
TNFRSF25-208ENST00000453341 LBHD1Q9BQE6 289 aaPredicted RBP26.76■■□□□ 1.87
TNFRSF25-208ENST00000453341 NOL10Q9BSC4 688 aaKnown RBP26.76■■□□□ 1.87
TNFRSF25-208ENST00000453341 API5Q9BZZ5 524 aaKnown RBP26.76■■□□□ 1.87
TNFRSF25-208ENST00000453341 GINM1Q9NU53 330 aa26.76■■□□□ 1.87
TNFRSF25-208ENST00000453341 PALD1Q9ULE6 856 aa26.76■■□□□ 1.87
TNFRSF25-208ENST00000453341 USP17L2Q6R6M4 530 aa26.75■■□□□ 1.87
TNFRSF25-208ENST00000453341 CRACR2BQ8N4Y2 399 aaPredicted RBP26.75■■□□□ 1.87
TNFRSF25-208ENST00000453341 EDC3Q96F86 508 aaKnown RBP26.75■■□□□ 1.87
TNFRSF25-208ENST00000453341 MYO5AQ9Y4I1 1855 aaKnown RBP26.74■■□□□ 1.87
TNFRSF25-208ENST00000453341 PPP4CP60510 307 aa26.74■■□□□ 1.87
TNFRSF25-208ENST00000453341 ZNF697Q5TEC3 545 aa26.74■■□□□ 1.87
TNFRSF25-208ENST00000453341 NAA16Q6N069 864 aaPredicted RBP26.74■■□□□ 1.87
TNFRSF25-208ENST00000453341 DDX20Q9UHI6 824 aaKnown RBP26.74■■□□□ 1.87
TNFRSF25-208ENST00000453341 RABGAP1Q9Y3P9 1069 aa26.74■■□□□ 1.87
TNFRSF25-208ENST00000453341 BAG3O95817 575 aa26.73■■□□□ 1.87
TNFRSF25-208ENST00000453341 MFSD14CQ5VZR4 134 aa26.73■■□□□ 1.87
TNFRSF25-208ENST00000453341 CDX2Q99626 313 aaPredicted RBP26.73■■□□□ 1.87
TNFRSF25-208ENST00000453341 TRIM34Q9BYJ4 488 aa26.73■■□□□ 1.87
TNFRSF25-208ENST00000453341 CWC22Q9HCG8 908 aaKnown RBP26.73■■□□□ 1.87
TNFRSF25-208ENST00000453341 SNRKQ9NRH2 765 aa26.73■■□□□ 1.87
TNFRSF25-208ENST00000453341 SAP30BPQ9UHR5 308 aaKnown RBP26.73■■□□□ 1.87
TNFRSF25-208ENST00000453341 PLCG2P16885 1265 aa26.72■■□□□ 1.87
TNFRSF25-208ENST00000453341 LPAR1Q92633 364 aa26.72■■□□□ 1.87
TNFRSF25-208ENST00000453341 C12orf42Q96LP6 360 aa26.72■■□□□ 1.87
TNFRSF25-208ENST00000453341 RLFQ13129 1914 aa26.72■■□□□ 1.87
TNFRSF25-208ENST00000453341 GH2P01242 217 aa26.71■■□□□ 1.87
TNFRSF25-208ENST00000453341 UQCRFS1P1P0C7P4 283 aa26.71■■□□□ 1.87
TNFRSF25-208ENST00000453341 RTP1P59025 263 aa26.71■■□□□ 1.87
TNFRSF25-208ENST00000453341 ZYXQ15942 572 aaKnown RBP26.71■■□□□ 1.87
TNFRSF25-208ENST00000453341 TRMT2AQ8IZ69 625 aaKnown RBP26.71■■□□□ 1.87
TNFRSF25-208ENST00000453341 TRPV1Q8NER1 839 aa26.71■■□□□ 1.87
TNFRSF25-208ENST00000453341 NPLOC4Q8TAT6 608 aa26.71■■□□□ 1.87
TNFRSF25-208ENST00000453341 SLC15A5A6NIM6 579 aa26.7■■□□□ 1.86
TNFRSF25-208ENST00000453341 DNM1LO00429 736 aa26.7■■□□□ 1.86
TNFRSF25-208ENST00000453341 GNAI3P08754 354 aa26.7■■□□□ 1.86
TNFRSF25-208ENST00000453341 PTPREP23469 700 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms