RNA–Protein interactions for RNA: ENST00000453310.5

RBM39-219, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,068 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-219ENST00000453310 WNK4Q96J92 1243 aa18.64■□□□□ 0.57
RBM39-219ENST00000453310 LSG1Q9H089 658 aaKnown RBP18.64■□□□□ 0.57
RBM39-219ENST00000453310 FAM155AB1AL88 458 aaPredicted RBP18.63■□□□□ 0.57
RBM39-219ENST00000453310 ASNSP08243 561 aa18.63■□□□□ 0.57
RBM39-219ENST00000453310 JAG1P78504 1218 aa18.63■□□□□ 0.57
RBM39-219ENST00000453310 SHROOM1Q2M3G4 852 aaPredicted RBP18.63■□□□□ 0.57
RBM39-219ENST00000453310 ERO1BQ86YB8 467 aa18.63■□□□□ 0.57
RBM39-219ENST00000453310 MAP4K1Q92918 833 aa18.63■□□□□ 0.57
RBM39-219ENST00000453310 MKNK2Q9HBH9 465 aa18.63■□□□□ 0.57
RBM39-219ENST00000453310 ZNF287Q9HBT7 754 aa18.63■□□□□ 0.57
RBM39-219ENST00000453310 GINM1Q9NU53 330 aa18.63■□□□□ 0.57
RBM39-219ENST00000453310 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.63■□□□□ 0.57
RBM39-219ENST00000453310 ZBTB21Q9ULJ3 1066 aa18.63■□□□□ 0.57
RBM39-219ENST00000453310 U3KPZ7 1027 aaPredicted RBP18.63■□□□□ 0.57
RBM39-219ENST00000453310 ZNF213O14771 459 aa18.62■□□□□ 0.57
RBM39-219ENST00000453310 GH2P01242 217 aa18.62■□□□□ 0.57
RBM39-219ENST00000453310 PTPRAP18433 802 aa18.62■□□□□ 0.57
RBM39-219ENST00000453310 GJA5P36382 358 aa18.62■□□□□ 0.57
RBM39-219ENST00000453310 VEGFBP49765 207 aa18.62■□□□□ 0.57
RBM39-219ENST00000453310 PDE4BQ07343 736 aa18.62■□□□□ 0.57
RBM39-219ENST00000453310 IMMTQ16891 758 aaKnown RBP18.62■□□□□ 0.57
RBM39-219ENST00000453310 ABCB5Q2M3G0 1257 aa18.62■□□□□ 0.57
RBM39-219ENST00000453310 SPRYD7Q5W111 196 aa18.62■□□□□ 0.57
RBM39-219ENST00000453310 OTUD5Q96G74 571 aa18.62■□□□□ 0.57
RBM39-219ENST00000453310 RBM8AQ9Y5S9 174 aaKnown RBP18.62■□□□□ 0.57
RBM39-219ENST00000453310 WDR33Q9C0J8 1336 aaKnown RBP18.62■□□□□ 0.57
RBM39-219ENST00000453310 PHIPQ8WWQ0 1821 aa18.62■□□□□ 0.57
RBM39-219ENST00000453310 THSD7BQ9C0I4 1608 aa18.61■□□□□ 0.57
RBM39-219ENST00000453310 PRDM1O75626 825 aa18.61■□□□□ 0.57
RBM39-219ENST00000453310 ZBTB48P10074 688 aaPredicted RBP18.61■□□□□ 0.57
RBM39-219ENST00000453310 AKR1B1P15121 316 aa18.61■□□□□ 0.57
RBM39-219ENST00000453310 RASA1P20936 1047 aa18.61■□□□□ 0.57
RBM39-219ENST00000453310 MKRN3Q13064 507 aaKnown RBP18.61■□□□□ 0.57
RBM39-219ENST00000453310 TBC1D10CQ8IV04 446 aa18.61■□□□□ 0.57
RBM39-219ENST00000453310 CCDC17Q96LX7 622 aa18.61■□□□□ 0.57
RBM39-219ENST00000453310 NBPF3Q9H094 633 aa18.61■□□□□ 0.57
RBM39-219ENST00000453310 CABP5Q9NP86 173 aa18.61■□□□□ 0.57
RBM39-219ENST00000453310 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.61■□□□□ 0.57
RBM39-219ENST00000453310 MPHOSPH10O00566 681 aaKnown RBP18.6■□□□□ 0.57
RBM39-219ENST00000453310 PPATQ06203 517 aa18.6■□□□□ 0.57
RBM39-219ENST00000453310 NOGQ13253 232 aa18.6■□□□□ 0.57
RBM39-219ENST00000453310 PPIL2Q13356 520 aa18.6■□□□□ 0.57
RBM39-219ENST00000453310 CCDC84Q86UT8 332 aaPredicted RBP18.6■□□□□ 0.57
RBM39-219ENST00000453310 DNAJC5GQ8N7S2 189 aa18.6■□□□□ 0.57
RBM39-219ENST00000453310 STAG1Q8WVM7 1258 aa18.6■□□□□ 0.57
RBM39-219ENST00000453310 TACC3Q9Y6A5 838 aa18.6■□□□□ 0.57
RBM39-219ENST00000453310 GREB1LQ9C091 1923 aaPredicted RBP18.59■□□□□ 0.57
RBM39-219ENST00000453310 USP17L5A8MUK1 530 aa18.59■□□□□ 0.57
RBM39-219ENST00000453310 AOC2O75106 756 aa18.59■□□□□ 0.57
RBM39-219ENST00000453310 FGRP09769 529 aa18.59■□□□□ 0.57
RBM39-219ENST00000453310 AKNAD1Q5T1N1 836 aa18.59■□□□□ 0.57
RBM39-219ENST00000453310 TMEM179Q6ZVK1 233 aa18.59■□□□□ 0.57
RBM39-219ENST00000453310 ZNF444Q8N0Y2 327 aaPredicted RBP18.59■□□□□ 0.57
RBM39-219ENST00000453310 RNF41Q9H4P4 317 aaPredicted RBP18.59■□□□□ 0.57
RBM39-219ENST00000453310 INCENPQ9NQS7 918 aa18.59■□□□□ 0.57
RBM39-219ENST00000453310 ZHX2Q9Y6X8 837 aa18.59■□□□□ 0.57
RBM39-219ENST00000453310 IRF6O14896 467 aa18.58■□□□□ 0.56
RBM39-219ENST00000453310 ORC4O43929 436 aa18.58■□□□□ 0.56
RBM39-219ENST00000453310 REC8O95072 547 aa18.58■□□□□ 0.56
RBM39-219ENST00000453310 CYP21A2P08686 494 aa18.58■□□□□ 0.56
RBM39-219ENST00000453310 PCP11498 1178 aaKnown RBP18.58■□□□□ 0.56
RBM39-219ENST00000453310 GUCY1A2P33402 732 aa18.58■□□□□ 0.56
RBM39-219ENST00000453310 SEPT2Q15019 361 aa18.58■□□□□ 0.56
RBM39-219ENST00000453310 RAB3GAP1Q15042 981 aa18.58■□□□□ 0.56
RBM39-219ENST00000453310 MFSD6Q6ZSS7 791 aa18.58■□□□□ 0.56
RBM39-219ENST00000453310 TBC1D2Q9BYX2 928 aa18.58■□□□□ 0.56
RBM39-219ENST00000453310 NEDD4P46934 1319 aa18.57■□□□□ 0.56
RBM39-219ENST00000453310 RRP12Q5JTH9 1297 aaKnown RBP18.57■□□□□ 0.56
RBM39-219ENST00000453310 ZIC5Q96T25 663 aa18.57■□□□□ 0.56
RBM39-219ENST00000453310 AS3MTQ9HBK9 375 aa18.57■□□□□ 0.56
RBM39-219ENST00000453310 TOMM22Q9NS69 142 aa18.57■□□□□ 0.56
RBM39-219ENST00000453310 KCNH4Q9UQ05 1017 aa18.57■□□□□ 0.56
RBM39-219ENST00000453310 AFG3L2Q9Y4W6 797 aa18.57■□□□□ 0.56
RBM39-219ENST00000453310 PTPRFP10586 1907 aa18.57■□□□□ 0.56
RBM39-219ENST00000453310 PLIN4Q96Q06 1357 aa18.56■□□□□ 0.56
RBM39-219ENST00000453310 PCNTO95613 3336 aa18.56■□□□□ 0.56
RBM39-219ENST00000453310 RANBP6O60518 1105 aaKnown RBP18.56■□□□□ 0.56
RBM39-219ENST00000453310 MAP2K2P36507 400 aa18.56■□□□□ 0.56
RBM39-219ENST00000453310 KIF23Q02241 960 aaPredicted RBP18.56■□□□□ 0.56
RBM39-219ENST00000453310 NECTIN1Q15223 517 aa18.56■□□□□ 0.56
RBM39-219ENST00000453310 FAM47AQ5JRC9 791 aa18.56■□□□□ 0.56
RBM39-219ENST00000453310 ZNF280CQ8ND82 737 aa18.56■□□□□ 0.56
RBM39-219ENST00000453310 WDR18Q9BV38 432 aa18.56■□□□□ 0.56
RBM39-219ENST00000453310 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.56■□□□□ 0.56
RBM39-219ENST00000453310 MANSC4A6NHS7 340 aaPredicted RBP18.55■□□□□ 0.56
RBM39-219ENST00000453310 TRIM75PA6NK02 468 aa18.55■□□□□ 0.56
RBM39-219ENST00000453310 TSPY2A6NKD2 308 aa18.55■□□□□ 0.56
RBM39-219ENST00000453310 CXCL11O14625 94 aa18.55■□□□□ 0.56
RBM39-219ENST00000453310 SLC27A2O14975 620 aa18.55■□□□□ 0.56
RBM39-219ENST00000453310 TSPY3P0CV98 308 aa18.55■□□□□ 0.56
RBM39-219ENST00000453310 TSPY8P0CW00 308 aa18.55■□□□□ 0.56
RBM39-219ENST00000453310 GTF2A2P52657 109 aa18.55■□□□□ 0.56
RBM39-219ENST00000453310 TFAP4Q01664 338 aa18.55■□□□□ 0.56
RBM39-219ENST00000453310 SPP2Q13103 211 aa18.55■□□□□ 0.56
RBM39-219ENST00000453310 SNAPC2Q13487 334 aa18.55■□□□□ 0.56
RBM39-219ENST00000453310 CREB3L3Q68CJ9 461 aa18.55■□□□□ 0.56
RBM39-219ENST00000453310 MS4A4AQ96JQ5 239 aa18.55■□□□□ 0.56
RBM39-219ENST00000453310 TAF6LQ9Y6J9 622 aa18.55■□□□□ 0.56
RBM39-219ENST00000453310 ICA1Q05084 483 aa18.54■□□□□ 0.56
RBM39-219ENST00000453310 CLEC10AQ8IUN9 316 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms