RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 WDR18Q9BV38 432 aa15.62■□□□□ 0.09
CHD3-206ENST00000452447 BOLA2Q9H3K6 86 aa15.62■□□□□ 0.09
CHD3-206ENST00000452447 TMOD4Q9NZQ9 345 aa15.62■□□□□ 0.09
CHD3-206ENST00000452447 SERPINB13Q9UIV8 391 aa15.62■□□□□ 0.09
CHD3-206ENST00000452447 LOC285556D6RIA3 1793 aa15.62■□□□□ 0.09
CHD3-206ENST00000452447 EN2P19622 333 aaPredicted RBP15.62■□□□□ 0.09
CHD3-206ENST00000452447 BACE1P56817 501 aa15.62■□□□□ 0.09
CHD3-206ENST00000452447 SH3D19Q5HYK7 790 aa15.62■□□□□ 0.09
CHD3-206ENST00000452447 ANKRD13CQ8N6S4 541 aa15.62■□□□□ 0.09
CHD3-206ENST00000452447 RIOK1Q9BRS2 568 aaKnown RBP15.62■□□□□ 0.09
CHD3-206ENST00000452447 CRNKL1Q9BZJ0 848 aaKnown RBP15.62■□□□□ 0.09
CHD3-206ENST00000452447 PAG1Q9NWQ8 432 aa15.62■□□□□ 0.09
CHD3-206ENST00000452447 ZBTB21Q9ULJ3 1066 aa15.62■□□□□ 0.09
CHD3-206ENST00000452447 ZNF532Q9HCE3 1301 aa15.61■□□□□ 0.09
CHD3-206ENST00000452447 C19orf81C9J6K1 198 aa15.61■□□□□ 0.09
CHD3-206ENST00000452447 ATP5JP18859 108 aa15.61■□□□□ 0.09
CHD3-206ENST00000452447 GRK4P32298 578 aa15.61■□□□□ 0.09
CHD3-206ENST00000452447 EHD4Q9H223 541 aa15.61■□□□□ 0.09
CHD3-206ENST00000452447 BIN2Q9UBW5 565 aaPredicted RBP15.61■□□□□ 0.09
CHD3-206ENST00000452447 USP17L10C9JJH3 530 aa15.6■□□□□ 0.09
CHD3-206ENST00000452447 TNPO2O14787 897 aaKnown RBP15.6■□□□□ 0.09
CHD3-206ENST00000452447 POLR3DP05423 398 aaPredicted RBP15.6■□□□□ 0.09
CHD3-206ENST00000452447 GCLCP48506 637 aaPredicted RBP15.6■□□□□ 0.09
CHD3-206ENST00000452447 JAG1P78504 1218 aa15.6■□□□□ 0.09
CHD3-206ENST00000452447 PRKCZQ05513 592 aa15.6■□□□□ 0.09
CHD3-206ENST00000452447 FAM110CQ1W6H9 321 aa15.6■□□□□ 0.09
CHD3-206ENST00000452447 EDC3Q96F86 508 aaKnown RBP15.6■□□□□ 0.09
CHD3-206ENST00000452447 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.6■□□□□ 0.094e-6■□□□□ 11.1
CHD3-206ENST00000452447 GH2P01242 217 aa15.59■□□□□ 0.09
CHD3-206ENST00000452447 IRX3P78415 501 aaPredicted RBP15.59■□□□□ 0.09
CHD3-206ENST00000452447 TATDN1Q6P1N9 297 aa15.59■□□□□ 0.09
CHD3-206ENST00000452447 HAUS7Q99871 368 aa15.59■□□□□ 0.09
CHD3-206ENST00000452447 ASCC2Q9H1I8 757 aaPredicted RBP15.59■□□□□ 0.09
CHD3-206ENST00000452447 MCM9Q9NXL9 1143 aa15.59■□□□□ 0.09
CHD3-206ENST00000452447 NAV1Q8NEY1 1877 aa15.58■□□□□ 0.09
CHD3-206ENST00000452447 TCRBV5S4A2TA0A5A2 114 aa15.58■□□□□ 0.09
CHD3-206ENST00000452447 UBXN2AP68543 259 aa15.58■□□□□ 0.09
CHD3-206ENST00000452447 SHROOM1Q2M3G4 852 aaPredicted RBP15.58■□□□□ 0.09
CHD3-206ENST00000452447 CERKLQ49MI3 558 aaPredicted RBP15.58■□□□□ 0.09
CHD3-206ENST00000452447 PRPF38BQ5VTL8 546 aaKnown RBP15.58■□□□□ 0.09
CHD3-206ENST00000452447 COA7Q96BR5 231 aa15.58■□□□□ 0.09
CHD3-206ENST00000452447 MYH7P12883 1935 aa15.58■□□□□ 0.08
CHD3-206ENST00000452447 CEP290O15078 2479 aa15.58■□□□□ 0.08
CHD3-206ENST00000452447 SMARCA5O60264 1052 aaPredicted RBP15.58■□□□□ 0.08
CHD3-206ENST00000452447 HOXA7P31268 230 aaPredicted RBP15.58■□□□□ 0.08
CHD3-206ENST00000452447 FLT3LGP49771 235 aa15.58■□□□□ 0.08
CHD3-206ENST00000452447 PLCD1P51178 756 aa15.58■□□□□ 0.08
CHD3-206ENST00000452447 RAB3GAP1Q15042 981 aa15.58■□□□□ 0.08
CHD3-206ENST00000452447 SLAIN1Q8ND83 568 aa15.58■□□□□ 0.08
CHD3-206ENST00000452447 FEZ1Q99689 392 aa15.58■□□□□ 0.08
CHD3-206ENST00000452447 CABP5Q9NP86 173 aa15.58■□□□□ 0.08
CHD3-206ENST00000452447 GABRQQ9UN88 632 aa15.58■□□□□ 0.08
CHD3-206ENST00000452447 ADD2P35612 726 aa15.57■□□□□ 0.08
CHD3-206ENST00000452447 MTFR1Q15390 333 aa15.57■□□□□ 0.08
CHD3-206ENST00000452447 ABCB5Q2M3G0 1257 aa15.57■□□□□ 0.08
CHD3-206ENST00000452447 LCORLQ8N3X6 602 aa15.57■□□□□ 0.08
CHD3-206ENST00000452447 SDR42E1Q8WUS8 393 aa15.57■□□□□ 0.08
CHD3-206ENST00000452447 DCTPP1Q9H773 170 aa15.57■□□□□ 0.08
CHD3-206ENST00000452447 ARMT1Q9H993 441 aa15.57■□□□□ 0.08
CHD3-206ENST00000452447 TAOK2Q9UL54 1235 aa15.57■□□□□ 0.08
CHD3-206ENST00000452447 ADCY3O60266 1144 aa15.56■□□□□ 0.08
CHD3-206ENST00000452447 ZSCAN25Q6NSZ9 544 aa15.56■□□□□ 0.08
CHD3-206ENST00000452447 USP17L2Q6R6M4 530 aa15.56■□□□□ 0.08
CHD3-206ENST00000452447 GPATCH3Q96I76 525 aa15.56■□□□□ 0.08
CHD3-206ENST00000452447 DCP1AQ9NPI6 582 aaPredicted RBP15.56■□□□□ 0.08
CHD3-206ENST00000452447 IRF5Q13568 498 aa15.55■□□□□ 0.08
CHD3-206ENST00000452447 UBE3CQ15386 1083 aa15.55■□□□□ 0.08
CHD3-206ENST00000452447 NKX2-3Q8TAU0 364 aa15.55■□□□□ 0.08
CHD3-206ENST00000452447 P2RX7Q99572 595 aaKnown RBP15.55■□□□□ 0.08
CHD3-206ENST00000452447 RNF208Q9H0X6 261 aa15.55■□□□□ 0.08
CHD3-206ENST00000452447 EMILIN3Q9NT22 766 aa15.55■□□□□ 0.08
CHD3-206ENST00000452447 ECHDC1Q9NTX5 307 aa15.55■□□□□ 0.08
CHD3-206ENST00000452447 MYH8P13535 1937 aa15.55■□□□□ 0.08
CHD3-206ENST00000452447 BAZ2AQ9UIF9 1905 aaKnown RBP15.55■□□□□ 0.08
CHD3-206ENST00000452447 MBD4O95243 580 aa15.54■□□□□ 0.08
CHD3-206ENST00000452447 SHMT1P34896 483 aa15.54■□□□□ 0.08
CHD3-206ENST00000452447 USP14P54578 494 aa15.54■□□□□ 0.08
CHD3-206ENST00000452447 HERVK_113P62684 666 aa15.54■□□□□ 0.08
CHD3-206ENST00000452447 ZYXQ15942 572 aaKnown RBP15.54■□□□□ 0.08
CHD3-206ENST00000452447 PXYLP1Q8TE99 480 aa15.54■□□□□ 0.08
CHD3-206ENST00000452447 DDRGK1Q96HY6 314 aa15.54■□□□□ 0.08
CHD3-206ENST00000452447 DDX60LQ5H9U9 1706 aaKnown RBP15.54■□□□□ 0.08
CHD3-206ENST00000452447 MPHOSPH10O00566 681 aaKnown RBP15.53■□□□□ 0.08
CHD3-206ENST00000452447 CCL5P13501 91 aa15.53■□□□□ 0.08
CHD3-206ENST00000452447 ELNP15502 786 aa15.53■□□□□ 0.08
CHD3-206ENST00000452447 GABPAQ06546 454 aa15.53■□□□□ 0.08
CHD3-206ENST00000452447 SLFNL1Q499Z3 407 aa15.53■□□□□ 0.08
CHD3-206ENST00000452447 AMOTL1Q8IY63 956 aa15.53■□□□□ 0.08
CHD3-206ENST00000452447 GPRC5AQ8NFJ5 357 aa15.53■□□□□ 0.08
CHD3-206ENST00000452447 GTF3C2Q8WUA4 911 aaPredicted RBP15.53■□□□□ 0.08
CHD3-206ENST00000452447 ATP8A2Q9NTI2 1148 aa15.53■□□□□ 0.08
CHD3-206ENST00000452447 MORF4L1Q9UBU8 362 aa15.53■□□□□ 0.08
CHD3-206ENST00000452447 PRKAB2O43741 272 aa15.53■□□□□ 0.08
CHD3-206ENST00000452447 GJB1P08034 283 aa15.53■□□□□ 0.08
CHD3-206ENST00000452447 CCAR1Q8IX12 1150 aaKnown RBP15.53■□□□□ 0.08
CHD3-206ENST00000452447 C12orf42Q96LP6 360 aa15.53■□□□□ 0.08
CHD3-206ENST00000452447 SWAP70Q9UH65 585 aa15.53■□□□□ 0.08
CHD3-206ENST00000452447 RRP1P56182 461 aaKnown RBP15.52■□□□□ 0.07
CHD3-206ENST00000452447 KIAA1683Q9H0B3 1180 aa15.52■□□□□ 0.07
CHD3-206ENST00000452447 USP17L15C9J2P7 530 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms