RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 FLT1P17948 1338 aa13.35□□□□□ -0.27
USP1-204ENST00000452143 ALPK3Q96L96 1907 aa13.35□□□□□ -0.27
USP1-204ENST00000452143 DDX60LQ5H9U9 1706 aaKnown RBP13.34□□□□□ -0.27
USP1-204ENST00000452143 HMGCRP04035 888 aa13.34□□□□□ -0.27
USP1-204ENST00000452143 OS9Q13438 667 aaPredicted RBP13.34□□□□□ -0.27
USP1-204ENST00000452143 CERS3Q8IU89 383 aa13.34□□□□□ -0.27
USP1-204ENST00000452143 DBNDD2Q9BQY9 259 aa13.34□□□□□ -0.27
USP1-204ENST00000452143 ASCC2Q9H1I8 757 aaPredicted RBP13.34□□□□□ -0.27
USP1-204ENST00000452143 CYP2E1P05181 493 aaPredicted RBP13.33□□□□□ -0.28
USP1-204ENST00000452143 BACE1P56817 501 aa13.33□□□□□ -0.28
USP1-204ENST00000452143 ATP8B2P98198 1209 aa13.33□□□□□ -0.28
USP1-204ENST00000452143 MTMR2Q13614 643 aa13.33□□□□□ -0.28
USP1-204ENST00000452143 RRP1BQ14684 758 aaKnown RBP13.33□□□□□ -0.28
USP1-204ENST00000452143 TMED8Q6PL24 325 aaPredicted RBP13.33□□□□□ -0.28
USP1-204ENST00000452143 FTSJ3Q8IY81 847 aaKnown RBP13.33□□□□□ -0.28
USP1-204ENST00000452143 DEFB118Q96PH6 123 aa13.33□□□□□ -0.28
USP1-204ENST00000452143 TRIM34Q9BYJ4 488 aa13.33□□□□□ -0.28
USP1-204ENST00000452143 CRISPLD2Q9H0B8 497 aa13.33□□□□□ -0.28
USP1-204ENST00000452143 SNRKQ9NRH2 765 aa13.33□□□□□ -0.28
USP1-204ENST00000452143 MORF4L1Q9UBU8 362 aa13.33□□□□□ -0.28
USP1-204ENST00000452143 TAOK2Q9UL54 1235 aa13.33□□□□□ -0.28
USP1-204ENST00000452143 C19orf81C9J6K1 198 aa13.32□□□□□ -0.28
USP1-204ENST00000452143 SURF6O75683 361 aaKnown RBP13.32□□□□□ -0.28
USP1-204ENST00000452143 HLA-DOAP06340 250 aa13.32□□□□□ -0.28
USP1-204ENST00000452143 HOXA7P31268 230 aaPredicted RBP13.32□□□□□ -0.28
USP1-204ENST00000452143 IRX3P78415 501 aaPredicted RBP13.32□□□□□ -0.28
USP1-204ENST00000452143 ADGRA1Q86SQ6 560 aa13.32□□□□□ -0.28
USP1-204ENST00000452143 FOXP4Q8IVH2 680 aaPredicted RBP13.32□□□□□ -0.28
USP1-204ENST00000452143 MAPKAPK5Q8IW41 473 aa13.32□□□□□ -0.28
USP1-204ENST00000452143 CRACR2BQ8N4Y2 399 aaPredicted RBP13.32□□□□□ -0.28
USP1-204ENST00000452143 ANKLE1Q8NAG6 615 aa13.32□□□□□ -0.28
USP1-204ENST00000452143 TGFBRAP1Q8WUH2 860 aa13.32□□□□□ -0.28
USP1-204ENST00000452143 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.32□□□□□ -0.28
USP1-204ENST00000452143 PRO3102Q9H379 93 aa13.32□□□□□ -0.28
USP1-204ENST00000452143 DNAJC18Q9H819 358 aa13.32□□□□□ -0.28
USP1-204ENST00000452143 TMOD4Q9NZQ9 345 aa13.32□□□□□ -0.28
USP1-204ENST00000452143 RBM27Q9P2N5 1060 aaKnown RBP13.32□□□□□ -0.28
USP1-204ENST00000452143 NOP58Q9Y2X3 529 aaKnown RBP13.32□□□□□ -0.28
USP1-204ENST00000452143 NAV1Q8NEY1 1877 aa13.31□□□□□ -0.28
USP1-204ENST00000452143 A0A1W2PPC1 479 aa13.31□□□□□ -0.28
USP1-204ENST00000452143 ZBTB7BO15156 539 aaPredicted RBP13.31□□□□□ -0.28
USP1-204ENST00000452143 TFRCP02786 760 aaKnown RBP13.31□□□□□ -0.28
USP1-204ENST00000452143 ATXN8OSP0DMR3 200 aa13.31□□□□□ -0.28
USP1-204ENST00000452143 GTF3C2Q8WUA4 911 aaPredicted RBP13.31□□□□□ -0.28
USP1-204ENST00000452143 SOCS4Q8WXH5 440 aa13.31□□□□□ -0.28
USP1-204ENST00000452143 DBNLQ9UJU6 430 aaKnown RBP13.31□□□□□ -0.28
USP1-204ENST00000452143 ZBTB21Q9ULJ3 1066 aa13.31□□□□□ -0.28
USP1-204ENST00000452143 USP17L10C9JJH3 530 aa13.3□□□□□ -0.28
USP1-204ENST00000452143 EVI5O60447 810 aa13.3□□□□□ -0.28
USP1-204ENST00000452143 ZAP70P43403 619 aa13.3□□□□□ -0.28
USP1-204ENST00000452143 ITPRIPQ8IWB1 547 aa13.3□□□□□ -0.28
USP1-204ENST00000452143 GJD2Q9UKL4 321 aa13.3□□□□□ -0.28
USP1-204ENST00000452143 PALD1Q9ULE6 856 aa13.3□□□□□ -0.28
USP1-204ENST00000452143 RPTORQ8N122 1335 aa13.3□□□□□ -0.28
USP1-204ENST00000452143 FRMPD3Q5JV73 1810 aa13.29□□□□□ -0.28
USP1-204ENST00000452143 GDF11O95390 407 aa13.29□□□□□ -0.28
USP1-204ENST00000452143 HERVK_113P62684 666 aa13.29□□□□□ -0.28
USP1-204ENST00000452143 NECAB2Q7Z6G3 386 aa13.29□□□□□ -0.28
USP1-204ENST00000452143 ERC1Q8IUD2 1116 aa13.29□□□□□ -0.28
USP1-204ENST00000452143 GPRC5AQ8NFJ5 357 aa13.29□□□□□ -0.28
USP1-204ENST00000452143 EHD4Q9H223 541 aa13.29□□□□□ -0.28
USP1-204ENST00000452143 C1orf115Q9H7X2 142 aa13.29□□□□□ -0.28
USP1-204ENST00000452143 HMX1Q9NP08 348 aaPredicted RBP13.29□□□□□ -0.28
USP1-204ENST00000452143 PIH1D3Q9NQM4 214 aaKnown RBP13.29□□□□□ -0.28
USP1-204ENST00000452143 IDH1O75874 414 aaKnown RBP13.28□□□□□ -0.28
USP1-204ENST00000452143 XRCC5P13010 732 aaKnown RBP13.28□□□□□ -0.28
USP1-204ENST00000452143 CYP7A1P22680 504 aa13.28□□□□□ -0.28
USP1-204ENST00000452143 MAPK4P31152 587 aa13.28□□□□□ -0.28
USP1-204ENST00000452143 JAG1P78504 1218 aa13.28□□□□□ -0.28
USP1-204ENST00000452143 TRMT44Q8IYL2 757 aaKnown RBP13.28□□□□□ -0.28
USP1-204ENST00000452143 TRIB2Q92519 343 aa13.28□□□□□ -0.28
USP1-204ENST00000452143 EAF2Q96CJ1 260 aaPredicted RBP13.28□□□□□ -0.28
USP1-204ENST00000452143 PAWRQ96IZ0 340 aaKnown RBP13.28□□□□□ -0.28
USP1-204ENST00000452143 C12orf42Q96LP6 360 aa13.28□□□□□ -0.28
USP1-204ENST00000452143 NUDT12Q9BQG2 462 aa13.28□□□□□ -0.28
USP1-204ENST00000452143 TLR7Q9NYK1 1049 aaKnown RBP13.28□□□□□ -0.28
USP1-204ENST00000452143 MYH8P13535 1937 aa13.27□□□□□ -0.28
USP1-204ENST00000452143 MAP3K12Q12852 859 aa13.27□□□□□ -0.29
USP1-204ENST00000452143 PDE3AQ14432 1141 aa13.27□□□□□ -0.29
USP1-204ENST00000452143 MAP3K21Q5TCX8 1036 aa13.27□□□□□ -0.29
USP1-204ENST00000452143 TATDN1Q6P1N9 297 aa13.27□□□□□ -0.29
USP1-204ENST00000452143 CEP85Q6P2H3 762 aa13.27□□□□□ -0.29
USP1-204ENST00000452143 P2RX7Q99572 595 aaKnown RBP13.27□□□□□ -0.29
USP1-204ENST00000452143 SAP30BPQ9UHR5 308 aaKnown RBP13.27□□□□□ -0.29
USP1-204ENST00000452143 SERPINB13Q9UIV8 391 aa13.27□□□□□ -0.29
USP1-204ENST00000452143 GH2P01242 217 aa13.26□□□□□ -0.29
USP1-204ENST00000452143 RLBP1P12271 317 aa13.26□□□□□ -0.29
USP1-204ENST00000452143 USP5P45974 858 aa13.26□□□□□ -0.29
USP1-204ENST00000452143 ERVK-9P63128 1117 aa13.26□□□□□ -0.29
USP1-204ENST00000452143 ERVK-24P63145 666 aa13.26□□□□□ -0.29
USP1-204ENST00000452143 DYNLL1P63167 89 aaKnown RBP13.26□□□□□ -0.29
USP1-204ENST00000452143 HNRNPUQ00839 825 aaKnown RBP eCLIP13.26□□□□□ -0.29
USP1-204ENST00000452143 SHROOM1Q2M3G4 852 aaPredicted RBP13.26□□□□□ -0.29
USP1-204ENST00000452143 USP17L2Q6R6M4 530 aa13.26□□□□□ -0.29
USP1-204ENST00000452143 TTC6Q86TZ1 520 aa13.26□□□□□ -0.29
USP1-204ENST00000452143 MAGEB6Q8N7X4 407 aa13.26□□□□□ -0.29
USP1-204ENST00000452143 MIGA1Q8NAN2 632 aa13.26□□□□□ -0.29
USP1-204ENST00000452143 FEZ1Q99689 392 aa13.26□□□□□ -0.29
USP1-204ENST00000452143 NBPF3Q9H094 633 aa13.26□□□□□ -0.29
USP1-204ENST00000452143 CCDC8Q9H0W5 538 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms