RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 OTOP1Q7RTM1 612 aa10.61□□□□□ -0.71
RFX3-209ENST00000451859 CCDC84Q86UT8 332 aaPredicted RBP10.61□□□□□ -0.71
RFX3-209ENST00000451859 PIH1D3Q9NQM4 214 aaKnown RBP10.61□□□□□ -0.71
RFX3-209ENST00000451859 PICK1Q9NRD5 415 aa10.61□□□□□ -0.71
RFX3-209ENST00000451859 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.61□□□□□ -0.71
RFX3-209ENST00000451859 ZNF112Q9UJU3 913 aa10.61□□□□□ -0.71
RFX3-209ENST00000451859 DDX19BQ9UMR2 479 aa10.61□□□□□ -0.71
RFX3-209ENST00000451859 LOC285556D6RIA3 1793 aa10.6□□□□□ -0.71
RFX3-209ENST00000451859 TK2O00142 265 aa10.6□□□□□ -0.71
RFX3-209ENST00000451859 IDH1O75874 414 aaKnown RBP10.6□□□□□ -0.71
RFX3-209ENST00000451859 CAP1Q01518 475 aa10.6□□□□□ -0.71
RFX3-209ENST00000451859 SLC4A8Q2Y0W8 1093 aa10.6□□□□□ -0.71
RFX3-209ENST00000451859 NOL9Q5SY16 702 aaKnown RBP10.6□□□□□ -0.71
RFX3-209ENST00000451859 C20orf194Q5TEA3 1177 aa10.6□□□□□ -0.71
RFX3-209ENST00000451859 ADGRA1Q86SQ6 560 aa10.6□□□□□ -0.71
RFX3-209ENST00000451859 ERC1Q8IUD2 1116 aa10.6□□□□□ -0.71
RFX3-209ENST00000451859 SCYL3Q8IZE3 742 aa10.6□□□□□ -0.71
RFX3-209ENST00000451859 EFCC1Q9HA90 598 aa10.6□□□□□ -0.71
RFX3-209ENST00000451859 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.6□□□□□ -0.71
RFX3-209ENST00000451859 PHF20L1A8MW92 1017 aa10.59□□□□□ -0.71
RFX3-209ENST00000451859 PDHXO00330 501 aa10.59□□□□□ -0.71
RFX3-209ENST00000451859 HMMRO75330 724 aa10.59□□□□□ -0.71
RFX3-209ENST00000451859 BAG3O95817 575 aa10.59□□□□□ -0.71
RFX3-209ENST00000451859 GADL1Q6ZQY3 521 aa10.59□□□□□ -0.71
RFX3-209ENST00000451859 MAPKAPK5Q8IW41 473 aa10.59□□□□□ -0.71
RFX3-209ENST00000451859 TGFBRAP1Q8WUH2 860 aa10.59□□□□□ -0.71
RFX3-209ENST00000451859 OSBPL5Q9H0X9 879 aaPredicted RBP10.59□□□□□ -0.71
RFX3-209ENST00000451859 ZBTB40Q9NUA8 1239 aa10.59□□□□□ -0.71
RFX3-209ENST00000451859 CPA4Q9UI42 421 aa10.59□□□□□ -0.71
RFX3-209ENST00000451859 ZHX2Q9Y6X8 837 aa10.59□□□□□ -0.71
RFX3-209ENST00000451859 TRIM75PA6NK02 468 aa10.58□□□□□ -0.72
RFX3-209ENST00000451859 PTPRAP18433 802 aa10.58□□□□□ -0.72
RFX3-209ENST00000451859 CYP7A1P22680 504 aa10.58□□□□□ -0.72
RFX3-209ENST00000451859 DYNLL1P63167 89 aaKnown RBP10.58□□□□□ -0.72
RFX3-209ENST00000451859 HSP90AB4PQ58FF6 505 aa10.58□□□□□ -0.72
RFX3-209ENST00000451859 MAGEB6Q8N7X4 407 aa10.58□□□□□ -0.72
RFX3-209ENST00000451859 MIGA1Q8NAN2 632 aa10.58□□□□□ -0.72
RFX3-209ENST00000451859 RHPN1Q8TCX5 695 aa10.58□□□□□ -0.72
RFX3-209ENST00000451859 ZNF512BQ96KM6 892 aaPredicted RBP10.58□□□□□ -0.72
RFX3-209ENST00000451859 ARHGAP39Q9C0H5 1083 aa10.58□□□□□ -0.72
RFX3-209ENST00000451859 ANTXR1Q9H6X2 564 aa10.58□□□□□ -0.72
RFX3-209ENST00000451859 SAP30BPQ9UHR5 308 aaKnown RBP10.58□□□□□ -0.72
RFX3-209ENST00000451859 KCNH4Q9UQ05 1017 aa10.58□□□□□ -0.72
RFX3-209ENST00000451859 PTPN22Q9Y2R2 807 aa10.58□□□□□ -0.72
RFX3-209ENST00000451859 DDX60LQ5H9U9 1706 aaKnown RBP10.58□□□□□ -0.72
RFX3-209ENST00000451859 BRCA2P51587 3418 aa10.57□□□□□ -0.72
RFX3-209ENST00000451859 COL2A1P02458 1487 aaPredicted RBP10.57□□□□□ -0.72
RFX3-209ENST00000451859 TLR2O60603 784 aa10.57□□□□□ -0.72
RFX3-209ENST00000451859 MYCP01106 439 aaPredicted RBP10.57□□□□□ -0.72
RFX3-209ENST00000451859 IFIT2P09913 472 aaKnown RBP10.57□□□□□ -0.72
RFX3-209ENST00000451859 RGS19P49795 217 aa10.57□□□□□ -0.72
RFX3-209ENST00000451859 PSEN2P49810 448 aa10.57□□□□□ -0.72
RFX3-209ENST00000451859 MOGSQ13724 837 aa10.57□□□□□ -0.72
RFX3-209ENST00000451859 KIF22Q14807 665 aa10.57□□□□□ -0.72
RFX3-209ENST00000451859 ANKRD23Q86SG2 305 aa10.57□□□□□ -0.72
RFX3-209ENST00000451859 SIRT2Q8IXJ6 389 aa10.57□□□□□ -0.72
RFX3-209ENST00000451859 KIF1BPQ96EK5 621 aa10.57□□□□□ -0.72
RFX3-209ENST00000451859 DNAJC2Q99543 621 aaKnown RBP10.57□□□□□ -0.72
RFX3-209ENST00000451859 ZCCHC17Q9NP64 241 aaKnown RBP10.57□□□□□ -0.72
RFX3-209ENST00000451859 FLT1P17948 1338 aa10.57□□□□□ -0.72
RFX3-209ENST00000451859 CTNND1O60716 968 aaKnown RBP10.56□□□□□ -0.72
RFX3-209ENST00000451859 MAP4K4O95819 1239 aaPredicted RBP10.56□□□□□ -0.72
RFX3-209ENST00000451859 CYP2C8P10632 490 aa10.56□□□□□ -0.72
RFX3-209ENST00000451859 USP5P45974 858 aa10.56□□□□□ -0.72
RFX3-209ENST00000451859 RPAP2Q8IXW5 612 aaPredicted RBP10.56□□□□□ -0.72
RFX3-209ENST00000451859 CLASRPQ8N2M8 674 aaKnown RBP10.56□□□□□ -0.72
RFX3-209ENST00000451859 CRACR2BQ8N4Y2 399 aaPredicted RBP10.56□□□□□ -0.72
RFX3-209ENST00000451859 TMC2Q8TDI7 906 aa10.56□□□□□ -0.72
RFX3-209ENST00000451859 YTHDC1Q96MU7 727 aaKnown RBP10.56□□□□□ -0.72
RFX3-209ENST00000451859 TRIM34Q9BYJ4 488 aa10.56□□□□□ -0.72
RFX3-209ENST00000451859 PALD1Q9ULE6 856 aa10.56□□□□□ -0.72
RFX3-209ENST00000451859 PTCH2Q9Y6C5 1203 aa10.56□□□□□ -0.72
RFX3-209ENST00000451859 MKI67P46013 3256 aaKnown RBP10.55□□□□□ -0.72
RFX3-209ENST00000451859 A0A0G2JLL6 359 aaPredicted RBP10.55□□□□□ -0.72
RFX3-209ENST00000451859 GOLIM4O00461 696 aa10.55□□□□□ -0.72
RFX3-209ENST00000451859 CXCL11O14625 94 aa10.55□□□□□ -0.72
RFX3-209ENST00000451859 SMARCA5O60264 1052 aaPredicted RBP10.55□□□□□ -0.72
RFX3-209ENST00000451859 GDF11O95390 407 aa10.55□□□□□ -0.72
RFX3-209ENST00000451859 PPP4CP60510 307 aa10.55□□□□□ -0.72
RFX3-209ENST00000451859 LACTBP83111 547 aaPredicted RBP10.55□□□□□ -0.72
RFX3-209ENST00000451859 MAP3K10Q02779 954 aa10.55□□□□□ -0.72
RFX3-209ENST00000451859 MAP3K12Q12852 859 aa10.55□□□□□ -0.72
RFX3-209ENST00000451859 SPP2Q13103 211 aa10.55□□□□□ -0.72
RFX3-209ENST00000451859 RRP1BQ14684 758 aaKnown RBP10.55□□□□□ -0.72
RFX3-209ENST00000451859 ARHGEF6Q15052 776 aa10.55□□□□□ -0.72
RFX3-209ENST00000451859 GPAT2Q6NUI2 795 aa10.55□□□□□ -0.72
RFX3-209ENST00000451859 PRRT2Q7Z6L0 340 aaPredicted RBP10.55□□□□□ -0.72
RFX3-209ENST00000451859 EDC3Q96F86 508 aaKnown RBP10.55□□□□□ -0.72
RFX3-209ENST00000451859 PARK7Q99497 189 aaKnown RBP10.55□□□□□ -0.72
RFX3-209ENST00000451859 CHMP4BQ9H444 224 aaKnown RBP10.55□□□□□ -0.72
RFX3-209ENST00000451859 AFG3L2Q9Y4W6 797 aa10.55□□□□□ -0.72
RFX3-209ENST00000451859 TBC1D12O60347 775 aa10.54□□□□□ -0.72
RFX3-209ENST00000451859 FMNL1O95466 1100 aaPredicted RBP10.54□□□□□ -0.72
RFX3-209ENST00000451859 CAP2P40123 477 aa10.54□□□□□ -0.72
RFX3-209ENST00000451859 PSMC4P43686 418 aa10.54□□□□□ -0.72
RFX3-209ENST00000451859 PDE3AQ14432 1141 aa10.54□□□□□ -0.72
RFX3-209ENST00000451859 SHROOM1Q2M3G4 852 aaPredicted RBP10.54□□□□□ -0.72
RFX3-209ENST00000451859 SLC9C1Q4G0N8 1177 aa10.54□□□□□ -0.72
RFX3-209ENST00000451859 C17orf99Q6UX52 265 aa10.54□□□□□ -0.72
RFX3-209ENST00000451859 FASTKD5Q7L8L6 764 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms