RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 ZBTB21Q9ULJ3 1066 aa11.71□□□□□ -0.53
USP54-207ENST00000451492 AGTPBP1Q9UPW5 1226 aa11.71□□□□□ -0.53
USP54-207ENST00000451492 PRKAB2O43741 272 aa11.7□□□□□ -0.54
USP54-207ENST00000451492 IGSF3O75054 1194 aa11.7□□□□□ -0.54
USP54-207ENST00000451492 GH2P01242 217 aa11.7□□□□□ -0.54
USP54-207ENST00000451492 ASNSP08243 561 aa11.7□□□□□ -0.54
USP54-207ENST00000451492 CYP2D6P10635 497 aa11.7□□□□□ -0.54
USP54-207ENST00000451492 PLCD1P51178 756 aa11.7□□□□□ -0.54
USP54-207ENST00000451492 ARHGEF6Q15052 776 aa11.7□□□□□ -0.54
USP54-207ENST00000451492 SLC9C1Q4G0N8 1177 aa11.7□□□□□ -0.54
USP54-207ENST00000451492 ECHDC1Q9NTX5 307 aa11.7□□□□□ -0.54
USP54-207ENST00000451492 MCM9Q9NXL9 1143 aa11.7□□□□□ -0.54
USP54-207ENST00000451492 SERPINB13Q9UIV8 391 aa11.7□□□□□ -0.54
USP54-207ENST00000451492 MPHOSPH10O00566 681 aaKnown RBP11.69□□□□□ -0.54
USP54-207ENST00000451492 RAB3GAP1Q15042 981 aa11.69□□□□□ -0.54
USP54-207ENST00000451492 TTC6Q86TZ1 520 aa11.69□□□□□ -0.54
USP54-207ENST00000451492 FOXP4Q8IVH2 680 aaPredicted RBP11.69□□□□□ -0.54
USP54-207ENST00000451492 ANKRD13CQ8N6S4 541 aa11.69□□□□□ -0.54
USP54-207ENST00000451492 PROCA1Q8NCQ7 364 aaPredicted RBP11.69□□□□□ -0.54
USP54-207ENST00000451492 OTUD7AQ8TE49 926 aaPredicted RBP11.69□□□□□ -0.54
USP54-207ENST00000451492 SH3TC2Q8TF17 1288 aa11.69□□□□□ -0.54
USP54-207ENST00000451492 TRIM47Q96LD4 638 aa11.69□□□□□ -0.54
USP54-207ENST00000451492 FEZ1Q99689 392 aa11.69□□□□□ -0.54
USP54-207ENST00000451492 PNMA3Q9UL41 463 aa11.69□□□□□ -0.54
USP54-207ENST00000451492 DOCK3Q8IZD9 2030 aa11.69□□□□□ -0.54
USP54-207ENST00000451492 MYPNQ86TC9 1320 aa11.68□□□□□ -0.54
USP54-207ENST00000451492 BCRP11274 1271 aa11.68□□□□□ -0.54
USP54-207ENST00000451492 OSBPP22059 807 aa11.68□□□□□ -0.54
USP54-207ENST00000451492 CERKLQ49MI3 558 aaPredicted RBP11.68□□□□□ -0.54
USP54-207ENST00000451492 TBC1D2Q9BYX2 928 aa11.68□□□□□ -0.54
USP54-207ENST00000451492 DCP1AQ9NPI6 582 aaPredicted RBP11.68□□□□□ -0.54
USP54-207ENST00000451492 TMOD4Q9NZQ9 345 aa11.68□□□□□ -0.54
USP54-207ENST00000451492 ZBTB47Q9UFB7 747 aaPredicted RBP11.68□□□□□ -0.54
USP54-207ENST00000451492 TAOK2Q9UL54 1235 aa11.68□□□□□ -0.54
USP54-207ENST00000451492 PLXNB2O15031 1838 aa11.67□□□□□ -0.54
USP54-207ENST00000451492 MYH4Q9Y623 1939 aa11.67□□□□□ -0.54
USP54-207ENST00000451492 CYP2D7A0A087X1C5 515 aa11.67□□□□□ -0.54
USP54-207ENST00000451492 POTEFA5A3E0 1075 aa11.67□□□□□ -0.54
USP54-207ENST00000451492 USP17L10C9JJH3 530 aa11.67□□□□□ -0.54
USP54-207ENST00000451492 PEX10O60683 326 aa11.67□□□□□ -0.54
USP54-207ENST00000451492 SHMT1P34896 483 aa11.67□□□□□ -0.54
USP54-207ENST00000451492 RGS19P49795 217 aa11.67□□□□□ -0.54
USP54-207ENST00000451492 FCGRTP55899 365 aa11.67□□□□□ -0.54
USP54-207ENST00000451492 IRX3P78415 501 aaPredicted RBP11.67□□□□□ -0.54
USP54-207ENST00000451492 PABPC4Q13310 644 aaKnown RBP eCLIP11.67□□□□□ -0.54
USP54-207ENST00000451492 ABCB5Q2M3G0 1257 aa11.67□□□□□ -0.54
USP54-207ENST00000451492 ZSCAN25Q6NSZ9 544 aa11.67□□□□□ -0.54
USP54-207ENST00000451492 TMED8Q6PL24 325 aaPredicted RBP11.67□□□□□ -0.54
USP54-207ENST00000451492 METTL16Q86W50 562 aaKnown RBP11.67□□□□□ -0.54
USP54-207ENST00000451492 STK11IPQ8N1F8 1099 aa11.67□□□□□ -0.54
USP54-207ENST00000451492 SLC44A5Q8NCS7 719 aa11.67□□□□□ -0.54
USP54-207ENST00000451492 RAET1EQ8TD07 263 aa11.67□□□□□ -0.54
USP54-207ENST00000451492 DYNLL2Q96FJ2 89 aa11.67□□□□□ -0.54
USP54-207ENST00000451492 PUS7LQ9H0K6 701 aaKnown RBP11.67□□□□□ -0.54
USP54-207ENST00000451492 EHD4Q9H223 541 aa11.67□□□□□ -0.54
USP54-207ENST00000451492 GABRQQ9UN88 632 aa11.67□□□□□ -0.54
USP54-207ENST00000451492 SLC45A1Q9Y2W3 748 aa11.67□□□□□ -0.54
USP54-207ENST00000451492 SLC4A4Q9Y6R1 1079 aa11.67□□□□□ -0.54
USP54-207ENST00000451492 COL11A1P12107 1806 aaPredicted RBP11.66□□□□□ -0.54
USP54-207ENST00000451492 PARP14Q460N5 1801 aa11.66□□□□□ -0.54
USP54-207ENST00000451492 SMIM22K7EJ46 135 aa11.66□□□□□ -0.54
USP54-207ENST00000451492 TNPO2O14787 897 aaKnown RBP11.66□□□□□ -0.54
USP54-207ENST00000451492 BACE1P56817 501 aa11.66□□□□□ -0.54
USP54-207ENST00000451492 PRKCZQ05513 592 aa11.66□□□□□ -0.54
USP54-207ENST00000451492 ANKRD45Q5TZF3 282 aa11.66□□□□□ -0.54
USP54-207ENST00000451492 TATDN1Q6P1N9 297 aa11.66□□□□□ -0.54
USP54-207ENST00000451492 WDR18Q9BV38 432 aa11.66□□□□□ -0.54
USP54-207ENST00000451492 ASCC2Q9H1I8 757 aaPredicted RBP11.66□□□□□ -0.54
USP54-207ENST00000451492 CABP5Q9NP86 173 aa11.66□□□□□ -0.54
USP54-207ENST00000451492 SRRDQ9UH36 339 aa11.66□□□□□ -0.54
USP54-207ENST00000451492 MKI67P46013 3256 aaKnown RBP11.66□□□□□ -0.54
USP54-207ENST00000451492 MX1P20591 662 aa11.65□□□□□ -0.54
USP54-207ENST00000451492 SEPT2Q15019 361 aa11.65□□□□□ -0.54
USP54-207ENST00000451492 UBE3CQ15386 1083 aa11.65□□□□□ -0.54
USP54-207ENST00000451492 SH3D19Q5HYK7 790 aa11.65□□□□□ -0.54
USP54-207ENST00000451492 NBPF11Q86T75 865 aa11.65□□□□□ -0.54
USP54-207ENST00000451492 CLEC10AQ8IUN9 316 aa11.65□□□□□ -0.54
USP54-207ENST00000451492 AMOTL1Q8IY63 956 aa11.65□□□□□ -0.54
USP54-207ENST00000451492 KBTBD3Q8NAB2 608 aa11.65□□□□□ -0.54
USP54-207ENST00000451492 ACER1Q8TDN7 264 aa11.65□□□□□ -0.54
USP54-207ENST00000451492 ARMC5Q96C12 935 aa11.65□□□□□ -0.54
USP54-207ENST00000451492 DDRGK1Q96HY6 314 aa11.65□□□□□ -0.54
USP54-207ENST00000451492 ZNF333Q96JL9 665 aa11.65□□□□□ -0.54
USP54-207ENST00000451492 PAGR1Q9BTK6 254 aa11.65□□□□□ -0.54
USP54-207ENST00000451492 FSD1Q9BTV5 496 aa11.65□□□□□ -0.54
USP54-207ENST00000451492 BIN2Q9UBW5 565 aaPredicted RBP11.65□□□□□ -0.54
USP54-207ENST00000451492 TTC41PQ6P2S7 1318 aa11.64□□□□□ -0.55
USP54-207ENST00000451492 M0R2C6 588 aa11.64□□□□□ -0.55
USP54-207ENST00000451492 ERC2O15083 957 aa11.64□□□□□ -0.55
USP54-207ENST00000451492 GNRH1P01148 92 aa11.64□□□□□ -0.55
USP54-207ENST00000451492 EN2P19622 333 aaPredicted RBP11.64□□□□□ -0.55
USP54-207ENST00000451492 HOXD10P28358 340 aa11.64□□□□□ -0.55
USP54-207ENST00000451492 IRX6P78412 446 aaPredicted RBP11.64□□□□□ -0.55
USP54-207ENST00000451492 FAM110CQ1W6H9 321 aa11.64□□□□□ -0.55
USP54-207ENST00000451492 USP17L2Q6R6M4 530 aa11.64□□□□□ -0.55
USP54-207ENST00000451492 EXOC6Q8TAG9 804 aa11.64□□□□□ -0.55
USP54-207ENST00000451492 PI4K2BQ8TCG2 481 aa11.64□□□□□ -0.55
USP54-207ENST00000451492 TMEM106CQ9BVX2 250 aa11.64□□□□□ -0.55
USP54-207ENST00000451492 EMILIN3Q9NT22 766 aa11.64□□□□□ -0.55
USP54-207ENST00000451492 ATP8A2Q9NTI2 1148 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms