RNA–Protein interactions for RNA: ENST00000451349.1

SSXP4-201, Transcript of SSX family pseudogene 4, humanhuman

BASIC

Gene SSXP4, Length 245 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP4-201ENST00000451349 LILRA6Q6PI73 481 aa4.31□□□□□ -1.72
SSXP4-201ENST00000451349 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.31□□□□□ -1.72
SSXP4-201ENST00000451349 TMC4Q7Z404 712 aa4.31□□□□□ -1.72
SSXP4-201ENST00000451349 FERMT3Q86UX7 667 aa4.31□□□□□ -1.72
SSXP4-201ENST00000451349 CKAP2LQ8IYA6 745 aa4.31□□□□□ -1.72
SSXP4-201ENST00000451349 SAMD3Q8N6K7 520 aa4.31□□□□□ -1.72
SSXP4-201ENST00000451349 PAF1Q8N7H5 531 aa4.31□□□□□ -1.72
SSXP4-201ENST00000451349 PDILTQ8N807 584 aa4.31□□□□□ -1.72
SSXP4-201ENST00000451349 PPM1EQ8WY54 764 aa4.31□□□□□ -1.72
SSXP4-201ENST00000451349 MKL1Q969V6 931 aa4.31□□□□□ -1.72
SSXP4-201ENST00000451349 NBPF4Q96M43 638 aa4.31□□□□□ -1.72
SSXP4-201ENST00000451349 TCF12Q99081 682 aa4.31□□□□□ -1.72
SSXP4-201ENST00000451349 FAM83CQ9BQN1 747 aa4.31□□□□□ -1.72
SSXP4-201ENST00000451349 PAGR1Q9BTK6 254 aa4.31□□□□□ -1.72
SSXP4-201ENST00000451349 CLEC4MQ9H2X3 399 aaPredicted RBP4.31□□□□□ -1.72
SSXP4-201ENST00000451349 VTI1BQ9UEU0 232 aa4.31□□□□□ -1.72
SSXP4-201ENST00000451349 TTF2Q9UNY4 1162 aaKnown RBP4.31□□□□□ -1.72
SSXP4-201ENST00000451349 PNMA6FA0A0J9YX94 578 aa4.3□□□□□ -1.72
SSXP4-201ENST00000451349 HMX2A2RU54 273 aa4.3□□□□□ -1.72
SSXP4-201ENST00000451349 CFAP69A5D8W1 941 aa4.3□□□□□ -1.72
SSXP4-201ENST00000451349 B8ZZF3 427 aa4.3□□□□□ -1.72
SSXP4-201ENST00000451349 DDX3YO15523 660 aaKnown RBP4.3□□□□□ -1.72
SSXP4-201ENST00000451349 LDHAP00338 332 aaKnown RBP4.3□□□□□ -1.72
SSXP4-201ENST00000451349 ESRRAP11474 423 aaPredicted RBP4.3□□□□□ -1.72
SSXP4-201ENST00000451349 GRIA4P48058 902 aa4.3□□□□□ -1.72
SSXP4-201ENST00000451349 NLRP12P59046 1061 aa4.3□□□□□ -1.72
SSXP4-201ENST00000451349 FAM193AP78312 1265 aa4.3□□□□□ -1.72
SSXP4-201ENST00000451349 RBM10P98175 930 aaKnown RBP4.3□□□□□ -1.72
SSXP4-201ENST00000451349 ATP2B2Q01814 1243 aa4.3□□□□□ -1.72
SSXP4-201ENST00000451349 PCDH1Q08174 1060 aa4.3□□□□□ -1.72
SSXP4-201ENST00000451349 ZNF124Q15973 351 aa4.3□□□□□ -1.72
SSXP4-201ENST00000451349 SPRED3Q2MJR0 410 aa4.3□□□□□ -1.72
SSXP4-201ENST00000451349 MAP9Q49MG5 647 aa4.3□□□□□ -1.72
SSXP4-201ENST00000451349 L1TD1Q5T7N2 865 aaKnown RBP4.3□□□□□ -1.72
SSXP4-201ENST00000451349 CCDC174Q6PII3 467 aa4.3□□□□□ -1.72
SSXP4-201ENST00000451349 KSR1Q8IVT5 923 aa4.3□□□□□ -1.72
SSXP4-201ENST00000451349 ZNF654Q8IZM8 581 aa4.3□□□□□ -1.72
SSXP4-201ENST00000451349 AGGF1Q8N302 714 aaeCLIP4.3□□□□□ -1.72
SSXP4-201ENST00000451349 EPS8L3Q8TE67 593 aaKnown RBP4.3□□□□□ -1.72
SSXP4-201ENST00000451349 SECISBP2LQ93073 1101 aaKnown RBP4.3□□□□□ -1.72
SSXP4-201ENST00000451349 FAM46AQ96IP4 442 aaKnown RBP4.3□□□□□ -1.72
SSXP4-201ENST00000451349 SLC38A3Q99624 504 aa4.3□□□□□ -1.72
SSXP4-201ENST00000451349 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.3□□□□□ -1.72
SSXP4-201ENST00000451349 INO80BQ9C086 356 aaPredicted RBP4.3□□□□□ -1.72
SSXP4-201ENST00000451349 SOX17Q9H6I2 414 aaPredicted RBP4.3□□□□□ -1.72
SSXP4-201ENST00000451349 ZFYVE1Q9HBF4 777 aa4.3□□□□□ -1.72
SSXP4-201ENST00000451349 KCNK4Q9NYG8 393 aa4.3□□□□□ -1.72
SSXP4-201ENST00000451349 CCDC39Q9UFE4 941 aa4.3□□□□□ -1.72
SSXP4-201ENST00000451349 PARP2Q9UGN5 583 aa4.3□□□□□ -1.72
SSXP4-201ENST00000451349 TMEM238LA0A1B0GVL6 79 aa4.29□□□□□ -1.72
SSXP4-201ENST00000451349 IFRD1O00458 451 aaPredicted RBP4.29□□□□□ -1.72
SSXP4-201ENST00000451349 NPHP1O15259 732 aa4.29□□□□□ -1.72
SSXP4-201ENST00000451349 SART1O43290 800 aaKnown RBP4.29□□□□□ -1.72
SSXP4-201ENST00000451349 PRPF40AO75400 957 aaKnown RBP4.29□□□□□ -1.72
SSXP4-201ENST00000451349 FOSP01100 380 aaPredicted RBP4.29□□□□□ -1.72
SSXP4-201ENST00000451349 CYP11A1P05108 521 aa4.29□□□□□ -1.72
SSXP4-201ENST00000451349 KRT18P05783 430 aaKnown RBP4.29□□□□□ -1.72
SSXP4-201ENST00000451349 DAB2P98082 770 aa4.29□□□□□ -1.72
SSXP4-201ENST00000451349 GSTM4Q03013 218 aa4.29□□□□□ -1.72
SSXP4-201ENST00000451349 PSMD2Q13200 908 aa4.29□□□□□ -1.72
SSXP4-201ENST00000451349 PPP2R5AQ15172 486 aa4.29□□□□□ -1.72
SSXP4-201ENST00000451349 MSMPQ1L6U9 139 aa4.29□□□□□ -1.72
SSXP4-201ENST00000451349 ARSHQ5FYA8 562 aa4.29□□□□□ -1.72
SSXP4-201ENST00000451349 ICE2Q659A1 982 aa4.29□□□□□ -1.72
SSXP4-201ENST00000451349 CASC1Q6TDU7 716 aa4.29□□□□□ -1.72
SSXP4-201ENST00000451349 MCF2L2Q86YR7 1114 aa4.29□□□□□ -1.72
SSXP4-201ENST00000451349 BHLHE22Q8NFJ8 381 aaPredicted RBP4.29□□□□□ -1.72
SSXP4-201ENST00000451349 ZNF512BQ96KM6 892 aaPredicted RBP4.29□□□□□ -1.72
SSXP4-201ENST00000451349 MPHOSPH6Q99547 160 aaKnown RBP4.29□□□□□ -1.72
SSXP4-201ENST00000451349 APBA2Q99767 749 aa4.29□□□□□ -1.72
SSXP4-201ENST00000451349 RUSC1Q9BVN2 902 aa4.29□□□□□ -1.72
SSXP4-201ENST00000451349 USP26Q9BXU7 913 aa4.29□□□□□ -1.72
SSXP4-201ENST00000451349 KRTAP9-3Q9BYQ3 159 aa4.29□□□□□ -1.72
SSXP4-201ENST00000451349 RNF208Q9H0X6 261 aa4.29□□□□□ -1.72
SSXP4-201ENST00000451349 ZHX3Q9H4I2 956 aa4.29□□□□□ -1.72
SSXP4-201ENST00000451349 HOMER2Q9NSB8 354 aa4.29□□□□□ -1.72
SSXP4-201ENST00000451349 ATG3Q9NT62 314 aa4.29□□□□□ -1.72
SSXP4-201ENST00000451349 MAP3K20Q9NYL2 800 aaKnown RBP4.29□□□□□ -1.72
SSXP4-201ENST00000451349 RAPGEFL1Q9UHV5 662 aa4.29□□□□□ -1.72
SSXP4-201ENST00000451349 TPX2Q9ULW0 747 aaKnown RBP4.29□□□□□ -1.72
SSXP4-201ENST00000451349 HIF3AQ9Y2N7 669 aa4.29□□□□□ -1.72
SSXP4-201ENST00000451349 LEMD3Q9Y2U8 911 aa4.29□□□□□ -1.72
SSXP4-201ENST00000451349 WDR64B1ANS9 1081 aa4.28□□□□□ -1.72
SSXP4-201ENST00000451349 NRDCO43847 1150 aa4.28□□□□□ -1.72
SSXP4-201ENST00000451349 ADAM11O75078 769 aa4.28□□□□□ -1.72
SSXP4-201ENST00000451349 CDC45O75419 566 aa4.28□□□□□ -1.72
SSXP4-201ENST00000451349 WISP1O95388 367 aa4.28□□□□□ -1.72
SSXP4-201ENST00000451349 FGAP02671 866 aa4.28□□□□□ -1.72
SSXP4-201ENST00000451349 LDHBP07195 334 aaKnown RBP4.28□□□□□ -1.72
SSXP4-201ENST00000451349 FGRP09769 529 aa4.28□□□□□ -1.72
SSXP4-201ENST00000451349 COL6A1P12109 1028 aa4.28□□□□□ -1.72
SSXP4-201ENST00000451349 FOSL1P15407 271 aa4.28□□□□□ -1.72
SSXP4-201ENST00000451349 ITPKAP23677 461 aa4.28□□□□□ -1.72
SSXP4-201ENST00000451349 GNALP38405 381 aa4.28□□□□□ -1.72
SSXP4-201ENST00000451349 PTPN12Q05209 780 aaKnown RBP4.28□□□□□ -1.72
SSXP4-201ENST00000451349 FMR1Q06787 632 aaKnown RBP eCLIP4.28□□□□□ -1.72
SSXP4-201ENST00000451349 GRM2Q14416 872 aa4.28□□□□□ -1.72
SSXP4-201ENST00000451349 HLTFQ14527 1009 aaKnown RBP eCLIP4.28□□□□□ -1.72
SSXP4-201ENST00000451349 MAPRE1Q15691 268 aaKnown RBP4.28□□□□□ -1.72
SSXP4-201ENST00000451349 ZNF423Q2M1K9 1284 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms