RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 PTMSP20962 102 aa7.72□□□□□ -1.17
USP46-202ENST00000451218 ST5P78524 1137 aa7.72□□□□□ -1.17
USP46-202ENST00000451218 ZFPM1Q8IX07 1006 aa7.72□□□□□ -1.17
USP46-202ENST00000451218 PHF20Q9BVI0 1012 aa7.72□□□□□ -1.17
USP46-202ENST00000451218 POLR3EQ9NVU0 708 aa7.72□□□□□ -1.17
USP46-202ENST00000451218 TFIP11Q9UBB9 837 aaKnown RBP7.72□□□□□ -1.17
USP46-202ENST00000451218 COL11A1P12107 1806 aaPredicted RBP7.72□□□□□ -1.17
USP46-202ENST00000451218 A0A0G2JMZ2 1700 aa7.72□□□□□ -1.17
USP46-202ENST00000451218 LRRC37A2A6NM11 1700 aa7.72□□□□□ -1.17
USP46-202ENST00000451218 PRDM1O75626 825 aa7.72□□□□□ -1.17
USP46-202ENST00000451218 DACT2Q5SW24 774 aa7.72□□□□□ -1.17
USP46-202ENST00000451218 SIAH1Q8IUQ4 282 aa7.72□□□□□ -1.17
USP46-202ENST00000451218 ZNF654Q8IZM8 581 aa7.72□□□□□ -1.17
USP46-202ENST00000451218 MRVI1Q9Y6F6 885 aa7.72□□□□□ -1.17
USP46-202ENST00000451218 VPS37CA5D8V6 355 aaPredicted RBP7.72□□□□□ -1.17
USP46-202ENST00000451218 CHRNA5P30532 468 aa7.72□□□□□ -1.17
USP46-202ENST00000451218 HMGN5P82970 282 aaKnown RBP7.72□□□□□ -1.17
USP46-202ENST00000451218 STYK1Q6J9G0 422 aa7.72□□□□□ -1.17
USP46-202ENST00000451218 NLGN1Q8N2Q7 840 aa7.72□□□□□ -1.17
USP46-202ENST00000451218 LRRC15Q8TF66 581 aa7.72□□□□□ -1.17
USP46-202ENST00000451218 DOCK1Q14185 1865 aa7.71□□□□□ -1.17
USP46-202ENST00000451218 MRE11P49959 708 aa7.71□□□□□ -1.17
USP46-202ENST00000451218 MDM2Q00987 491 aaPredicted RBP7.71□□□□□ -1.17
USP46-202ENST00000451218 GUCY1B3Q02153 619 aa7.71□□□□□ -1.17
USP46-202ENST00000451218 RRP1BQ14684 758 aaKnown RBP7.71□□□□□ -1.17
USP46-202ENST00000451218 IL17AQ16552 155 aa7.71□□□□□ -1.17
USP46-202ENST00000451218 GMLQ99445 158 aa7.71□□□□□ -1.17
USP46-202ENST00000451218 CNNM2Q9H8M5 875 aa7.71□□□□□ -1.17
USP46-202ENST00000451218 RAI14Q9P0K7 980 aa7.71□□□□□ -1.17
USP46-202ENST00000451218 GGA1Q9UJY5 639 aa7.71□□□□□ -1.17
USP46-202ENST00000451218 PCDHA7Q9UN72 937 aa7.71□□□□□ -1.17
USP46-202ENST00000451218 MMP1P03956 469 aa7.71□□□□□ -1.18
USP46-202ENST00000451218 MFSD6Q6ZSS7 791 aa7.71□□□□□ -1.18
USP46-202ENST00000451218 CCDC144CPQ8IYA2 1237 aa7.71□□□□□ -1.18
USP46-202ENST00000451218 ZSCAN16Q9H4T2 348 aaPredicted RBP7.71□□□□□ -1.18
USP46-202ENST00000451218 MBD3O95983 291 aa7.71□□□□□ -1.18
USP46-202ENST00000451218 PCP11498 1178 aaKnown RBP7.71□□□□□ -1.18
USP46-202ENST00000451218 MYSM1Q5VVJ2 828 aa7.71□□□□□ -1.18
USP46-202ENST00000451218 SHC4Q6S5L8 630 aa7.71□□□□□ -1.18
USP46-202ENST00000451218 KRT23Q9C075 422 aa7.71□□□□□ -1.18
USP46-202ENST00000451218 ARPP21Q9UBL0 812 aaPredicted RBP7.71□□□□□ -1.18
USP46-202ENST00000451218 A0A087X0B3 334 aa7.71□□□□□ -1.18
USP46-202ENST00000451218 SNHG28P0DPA3 235 aa7.71□□□□□ -1.18
USP46-202ENST00000451218 METAP2P50579 478 aaKnown RBP eCLIP7.71□□□□□ -1.18
USP46-202ENST00000451218 TMEM67Q5HYA8 995 aa7.71□□□□□ -1.18
USP46-202ENST00000451218 FAM47AQ5JRC9 791 aa7.71□□□□□ -1.18
USP46-202ENST00000451218 KRT40Q6A162 431 aa7.71□□□□□ -1.18
USP46-202ENST00000451218 TMTC3Q6ZXV5 915 aa7.71□□□□□ -1.18
USP46-202ENST00000451218 C4orf32Q8N8J7 132 aa7.71□□□□□ -1.18
USP46-202ENST00000451218 FANCBQ8NB91 859 aa7.71□□□□□ -1.18
USP46-202ENST00000451218 WDR66Q8TBY9 1149 aa7.71□□□□□ -1.18
USP46-202ENST00000451218 MASTLQ96GX5 879 aa7.71□□□□□ -1.18
USP46-202ENST00000451218 CNTNAP1P78357 1384 aa7.7□□□□□ -1.18
USP46-202ENST00000451218 GOLGA6L3A6NEY3 463 aa7.7□□□□□ -1.18
USP46-202ENST00000451218 PDIA4P13667 645 aaKnown RBP7.7□□□□□ -1.18
USP46-202ENST00000451218 MICU3Q86XE3 530 aa7.7□□□□□ -1.18
USP46-202ENST00000451218 STAG2Q8N3U4 1231 aa7.7□□□□□ -1.18
USP46-202ENST00000451218 ANKIB1Q9P2G1 1089 aa7.7□□□□□ -1.18
USP46-202ENST00000451218 SPDYE2BA6NHP3 402 aa7.7□□□□□ -1.18
USP46-202ENST00000451218 SPDYE6P0CI01 402 aa7.7□□□□□ -1.18
USP46-202ENST00000451218 BTDP43251 543 aa7.7□□□□□ -1.18
USP46-202ENST00000451218 FKBP1AP62942 108 aaKnown RBP7.7□□□□□ -1.18
USP46-202ENST00000451218 SPDYE2Q495Y8 402 aa7.7□□□□□ -1.18
USP46-202ENST00000451218 VPS37DQ86XT2 251 aa7.7□□□□□ -1.18
USP46-202ENST00000451218 ZBED3Q96IU2 234 aaPredicted RBP7.7□□□□□ -1.18
USP46-202ENST00000451218 FAM198AQ9UFP1 575 aa7.7□□□□□ -1.18
USP46-202ENST00000451218 PDCP20941 246 aa7.7□□□□□ -1.18
USP46-202ENST00000451218 CCDC183Q5T5S1 534 aa7.7□□□□□ -1.18
USP46-202ENST00000451218 TMC4Q7Z404 712 aa7.7□□□□□ -1.18
USP46-202ENST00000451218 DEFB132Q7Z7B7 95 aa7.7□□□□□ -1.18
USP46-202ENST00000451218 RPGRQ92834 1020 aaKnown RBP7.7□□□□□ -1.18
USP46-202ENST00000451218 MED15Q96RN5 788 aa7.7□□□□□ -1.18
USP46-202ENST00000451218 COA1Q9GZY4 146 aa7.7□□□□□ -1.18
USP46-202ENST00000451218 CLSTN2Q9H4D0 955 aa7.7□□□□□ -1.18
USP46-202ENST00000451218 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.7□□□□□ -1.18
USP46-202ENST00000451218 USP17L3A6NCW0 530 aa7.69□□□□□ -1.18
USP46-202ENST00000451218 USP17L4A6NCW7 530 aa7.69□□□□□ -1.18
USP46-202ENST00000451218 ZBTB43O43298 467 aa7.69□□□□□ -1.18
USP46-202ENST00000451218 BMP6P22004 513 aa7.69□□□□□ -1.18
USP46-202ENST00000451218 SHMT1P34896 483 aa7.69□□□□□ -1.18
USP46-202ENST00000451218 NFIAQ12857 509 aa7.69□□□□□ -1.18
USP46-202ENST00000451218 USP17L1Q7RTZ2 530 aa7.69□□□□□ -1.18
USP46-202ENST00000451218 ZNF804AQ7Z570 1209 aa7.69□□□□□ -1.18
USP46-202ENST00000451218 FOXP4Q8IVH2 680 aaPredicted RBP7.69□□□□□ -1.18
USP46-202ENST00000451218 GNL3LQ9NVN8 582 aaKnown RBP7.69□□□□□ -1.18
USP46-202ENST00000451218 ORC3Q9UBD5 711 aaPredicted RBP7.69□□□□□ -1.18
USP46-202ENST00000451218 A0A087WWV3 80 aa7.69□□□□□ -1.18
USP46-202ENST00000451218 TDO2P48775 406 aa7.69□□□□□ -1.18
USP46-202ENST00000451218 CHAF1AQ13111 956 aaPredicted RBP7.69□□□□□ -1.18
USP46-202ENST00000451218 NR5A1Q13285 461 aa7.69□□□□□ -1.18
USP46-202ENST00000451218 IQCB1Q15051 598 aa7.69□□□□□ -1.18
USP46-202ENST00000451218 PALM3A6NDB9 673 aaPredicted RBP7.69□□□□□ -1.18
USP46-202ENST00000451218 LDHBP07195 334 aaKnown RBP7.69□□□□□ -1.18
USP46-202ENST00000451218 TSPYL2Q9H2G4 693 aaPredicted RBP7.69□□□□□ -1.18
USP46-202ENST00000451218 FBXO2Q9UK22 296 aaPredicted RBP7.69□□□□□ -1.18
USP46-202ENST00000451218 TGFBRAP1Q8WUH2 860 aa7.69□□□□□ -1.18
USP46-202ENST00000451218 PPP1R11O60927 126 aaPredicted RBP7.68□□□□□ -1.18
USP46-202ENST00000451218 NDUFA8P51970 172 aa7.68□□□□□ -1.18
USP46-202ENST00000451218 FOSBP53539 338 aa7.68□□□□□ -1.18
USP46-202ENST00000451218 MFSD14BQ5SR56 506 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms