RNA–Protein interactions for RNA: ENST00000451070.1

LINC01238-204, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 4

Gene LINC01238, Length 599 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-204ENST00000451070 INHAP05111 366 aa12.09□□□□□ -0.47
LINC01238-204ENST00000451070 ASNSP08243 561 aa12.09□□□□□ -0.47
LINC01238-204ENST00000451070 CYP7A1P22680 504 aa12.09□□□□□ -0.47
LINC01238-204ENST00000451070 GCLCP48506 637 aaPredicted RBP12.09□□□□□ -0.47
LINC01238-204ENST00000451070 BACE1P56817 501 aa12.09□□□□□ -0.47
LINC01238-204ENST00000451070 MTMR2Q13614 643 aa12.09□□□□□ -0.47
LINC01238-204ENST00000451070 DIEXFQ68CQ4 756 aaKnown RBP12.09□□□□□ -0.47
LINC01238-204ENST00000451070 FOXP4Q8IVH2 680 aaPredicted RBP12.09□□□□□ -0.47
LINC01238-204ENST00000451070 ANTXR1Q9H6X2 564 aa12.09□□□□□ -0.47
LINC01238-204ENST00000451070 AS3MTQ9HBK9 375 aa12.09□□□□□ -0.47
LINC01238-204ENST00000451070 SAP30BPQ9UHR5 308 aaKnown RBP12.09□□□□□ -0.47
LINC01238-204ENST00000451070 EXOC6BQ9Y2D4 811 aa12.09□□□□□ -0.47
LINC01238-204ENST00000451070 IDH1O75874 414 aaKnown RBP12.08□□□□□ -0.48
LINC01238-204ENST00000451070 GDF11O95390 407 aa12.08□□□□□ -0.48
LINC01238-204ENST00000451070 PABPC4Q13310 644 aaKnown RBP eCLIP12.08□□□□□ -0.48
LINC01238-204ENST00000451070 CRACR2BQ8N4Y2 399 aaPredicted RBP12.08□□□□□ -0.48
LINC01238-204ENST00000451070 MAGEB6Q8N7X4 407 aa12.08□□□□□ -0.48
LINC01238-204ENST00000451070 MIGA1Q8NAN2 632 aa12.08□□□□□ -0.48
LINC01238-204ENST00000451070 COA7Q96BR5 231 aa12.08□□□□□ -0.48
LINC01238-204ENST00000451070 GJD2Q9UKL4 321 aa12.08□□□□□ -0.48
LINC01238-204ENST00000451070 ZBTB21Q9ULJ3 1066 aa12.08□□□□□ -0.48
LINC01238-204ENST00000451070 COLQQ9Y215 455 aaPredicted RBP12.08□□□□□ -0.48
LINC01238-204ENST00000451070 DDX60LQ5H9U9 1706 aaKnown RBP12.08□□□□□ -0.48
LINC01238-204ENST00000451070 PEX10O60683 326 aa12.07□□□□□ -0.48
LINC01238-204ENST00000451070 SGPL1O95470 568 aa12.07□□□□□ -0.48
LINC01238-204ENST00000451070 HOXA7P31268 230 aaPredicted RBP12.07□□□□□ -0.48
LINC01238-204ENST00000451070 RANBP2P49792 3224 aaKnown RBP12.07□□□□□ -0.48
LINC01238-204ENST00000451070 FXR1P51114 621 aaKnown RBP eCLIP12.07□□□□□ -0.48
LINC01238-204ENST00000451070 AACSQ86V21 672 aa12.07□□□□□ -0.48
LINC01238-204ENST00000451070 P2RX7Q99572 595 aaKnown RBP12.07□□□□□ -0.48
LINC01238-204ENST00000451070 PAK6Q9NQU5 681 aaPredicted RBP12.07□□□□□ -0.48
LINC01238-204ENST00000451070 GINM1Q9NU53 330 aa12.07□□□□□ -0.48
LINC01238-204ENST00000451070 MORF4L1Q9UBU8 362 aa12.07□□□□□ -0.48
LINC01238-204ENST00000451070 ALPK3Q96L96 1907 aa12.07□□□□□ -0.48
LINC01238-204ENST00000451070 C19orf81C9J6K1 198 aa12.06□□□□□ -0.48
LINC01238-204ENST00000451070 USP17L10C9JJH3 530 aa12.06□□□□□ -0.48
LINC01238-204ENST00000451070 FARP2O94887 1054 aaPredicted RBP12.06□□□□□ -0.48
LINC01238-204ENST00000451070 HLA-DOAP06340 250 aa12.06□□□□□ -0.48
LINC01238-204ENST00000451070 ERC1Q8IUD2 1116 aa12.06□□□□□ -0.48
LINC01238-204ENST00000451070 DEFB118Q96PH6 123 aa12.06□□□□□ -0.48
LINC01238-204ENST00000451070 TXNRD2Q9NNW7 524 aa12.06□□□□□ -0.48
LINC01238-204ENST00000451070 IL1RAPL2Q9NP60 686 aa12.06□□□□□ -0.48
LINC01238-204ENST00000451070 TAOK2Q9UL54 1235 aa12.06□□□□□ -0.48
LINC01238-204ENST00000451070 NAV1Q8NEY1 1877 aa12.06□□□□□ -0.48
LINC01238-204ENST00000451070 CENPBP07199 599 aaPredicted RBP12.05□□□□□ -0.48
LINC01238-204ENST00000451070 HERVK_113P62684 666 aa12.05□□□□□ -0.48
LINC01238-204ENST00000451070 IRX3P78415 501 aaPredicted RBP12.05□□□□□ -0.48
LINC01238-204ENST00000451070 MAP3K12Q12852 859 aa12.05□□□□□ -0.48
LINC01238-204ENST00000451070 TATDN1Q6P1N9 297 aa12.05□□□□□ -0.48
LINC01238-204ENST00000451070 POTEEQ6S8J3 1075 aa12.05□□□□□ -0.48
LINC01238-204ENST00000451070 SIRT2Q8IXJ6 389 aa12.05□□□□□ -0.48
LINC01238-204ENST00000451070 RHPN1Q8TCX5 695 aa12.05□□□□□ -0.48
LINC01238-204ENST00000451070 DPF3Q92784 378 aa12.05□□□□□ -0.48
LINC01238-204ENST00000451070 RIOK1Q9BRS2 568 aaKnown RBP12.05□□□□□ -0.48
LINC01238-204ENST00000451070 TRIM34Q9BYJ4 488 aa12.05□□□□□ -0.48
LINC01238-204ENST00000451070 CRISPLD2Q9H0B8 497 aa12.05□□□□□ -0.48
LINC01238-204ENST00000451070 EMILIN3Q9NT22 766 aa12.05□□□□□ -0.48
LINC01238-204ENST00000451070 TMOD4Q9NZQ9 345 aa12.05□□□□□ -0.48
LINC01238-204ENST00000451070 GH2P01242 217 aa12.04□□□□□ -0.48
LINC01238-204ENST00000451070 HMGCRP04035 888 aa12.04□□□□□ -0.48
LINC01238-204ENST00000451070 USP5P45974 858 aa12.04□□□□□ -0.48
LINC01238-204ENST00000451070 TRIM32Q13049 653 aa12.04□□□□□ -0.48
LINC01238-204ENST00000451070 TMED8Q6PL24 325 aaPredicted RBP12.04□□□□□ -0.48
LINC01238-204ENST00000451070 CERS3Q8IU89 383 aa12.04□□□□□ -0.48
LINC01238-204ENST00000451070 HTATIP2Q9BUP3 242 aa12.04□□□□□ -0.48
LINC01238-204ENST00000451070 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.04□□□□□ -0.48
LINC01238-204ENST00000451070 EHD4Q9H223 541 aa12.04□□□□□ -0.48
LINC01238-204ENST00000451070 RBPJLQ9UBG7 517 aa12.04□□□□□ -0.48
LINC01238-204ENST00000451070 SERPINB13Q9UIV8 391 aa12.04□□□□□ -0.48
LINC01238-204ENST00000451070 SZT2Q5T011 3432 aa12.04□□□□□ -0.48
LINC01238-204ENST00000451070 TFRCP02786 760 aaKnown RBP12.03□□□□□ -0.48
LINC01238-204ENST00000451070 SHMT1P34896 483 aa12.03□□□□□ -0.48
LINC01238-204ENST00000451070 PLCD1P51178 756 aa12.03□□□□□ -0.48
LINC01238-204ENST00000451070 Q3C1V9 767 aa12.03□□□□□ -0.48
LINC01238-204ENST00000451070 HSP90AB4PQ58FF6 505 aa12.03□□□□□ -0.48
LINC01238-204ENST00000451070 USP17L2Q6R6M4 530 aa12.03□□□□□ -0.48
LINC01238-204ENST00000451070 CHRDL2Q6WN34 429 aa12.03□□□□□ -0.48
LINC01238-204ENST00000451070 TRIB2Q92519 343 aa12.03□□□□□ -0.48
LINC01238-204ENST00000451070 C12orf42Q96LP6 360 aa12.03□□□□□ -0.48
LINC01238-204ENST00000451070 ZBTB40Q9NUA8 1239 aa12.03□□□□□ -0.48
LINC01238-204ENST00000451070 PDE6AP16499 860 aa12.02□□□□□ -0.49
LINC01238-204ENST00000451070 CAPN2P17655 700 aa12.02□□□□□ -0.49
LINC01238-204ENST00000451070 CYP2B6P20813 491 aa12.02□□□□□ -0.49
LINC01238-204ENST00000451070 ERVK-9P63128 1117 aa12.02□□□□□ -0.49
LINC01238-204ENST00000451070 ERVK-24P63145 666 aa12.02□□□□□ -0.49
LINC01238-204ENST00000451070 EVX2Q03828 476 aa12.02□□□□□ -0.49
LINC01238-204ENST00000451070 GABPAQ06546 454 aa12.02□□□□□ -0.49
LINC01238-204ENST00000451070 TTC6Q86TZ1 520 aa12.02□□□□□ -0.49
LINC01238-204ENST00000451070 RPAP2Q8IXW5 612 aaPredicted RBP12.02□□□□□ -0.49
LINC01238-204ENST00000451070 GPRC5AQ8NFJ5 357 aa12.02□□□□□ -0.49
LINC01238-204ENST00000451070 DIS3LQ8TF46 1054 aaKnown RBP12.02□□□□□ -0.49
LINC01238-204ENST00000451070 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.02□□□□□ -0.49
LINC01238-204ENST00000451070 USP6NLQ92738 828 aa12.02□□□□□ -0.49
LINC01238-204ENST00000451070 KIF1BPQ96EK5 621 aa12.02□□□□□ -0.49
LINC01238-204ENST00000451070 PORCNQ9H237 461 aa12.02□□□□□ -0.49
LINC01238-204ENST00000451070 PRO3102Q9H379 93 aa12.02□□□□□ -0.49
LINC01238-204ENST00000451070 RBM27Q9P2N5 1060 aaKnown RBP12.02□□□□□ -0.49
LINC01238-204ENST00000451070 COG6Q9Y2V7 657 aa12.02□□□□□ -0.49
LINC01238-204ENST00000451070 RPTORQ8N122 1335 aa12.02□□□□□ -0.49
LINC01238-204ENST00000451070 MAGEB6P1A0A0J9YX57 407 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms