RNA–Protein interactions for RNA: ENST00000450584.5

LDHB-204, Transcript of lactate dehydrogenase B, human

TSL 3

Gene LDHB, Length 732 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHB-204	ENST00000450584	SNAPC2	Q13487	334 aa		11.66	□□□□□ -0.54
LDHB-204	ENST00000450584	VPS37D	Q86XT2	251 aa		11.66	□□□□□ -0.54
LDHB-204	ENST00000450584	LPIN2	Q92539	896 aa		11.66	□□□□□ -0.54
LDHB-204	ENST00000450584	ZKSCAN4	Q969J2	545 aa	Predicted RBP	11.66	□□□□□ -0.54
LDHB-204	ENST00000450584	SNX27	Q96L92	541 aa		11.66	□□□□□ -0.54
LDHB-204	ENST00000450584	HAUS7	Q99871	368 aa		11.66	□□□□□ -0.54
LDHB-204	ENST00000450584	USP26	Q9BXU7	913 aa		11.66	□□□□□ -0.54
LDHB-204	ENST00000450584	TMEM39B	Q9GZU3	492 aa		11.66	□□□□□ -0.54
LDHB-204	ENST00000450584	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	11.66	□□□□□ -0.54
LDHB-204	ENST00000450584	PAG1	Q9NWQ8	432 aa		11.66	□□□□□ -0.54
LDHB-204	ENST00000450584	CSAD	Q9Y600	493 aa		11.66	□□□□□ -0.54
LDHB-204	ENST00000450584	MYO1B	O43795	1136 aa		11.65	□□□□□ -0.54
LDHB-204	ENST00000450584	MCM2	P49736	904 aa		11.65	□□□□□ -0.54
LDHB-204	ENST00000450584	SPDYE2	Q495Y8	402 aa		11.65	□□□□□ -0.54
LDHB-204	ENST00000450584	CAVIN4	Q5BKX8	364 aa		11.65	□□□□□ -0.54
LDHB-204	ENST00000450584	XAGE2	Q96GT9	111 aa		11.65	□□□□□ -0.54
LDHB-204	ENST00000450584	PUS3	Q9BZE2	481 aa	Known RBP	11.65	□□□□□ -0.54
LDHB-204	ENST00000450584	ANKRD2	Q9GZV1	360 aa		11.65	□□□□□ -0.54
LDHB-204	ENST00000450584	NBPF3	Q9H094	633 aa		11.65	□□□□□ -0.54
LDHB-204	ENST00000450584	C11orf49	Q9H6J7	331 aa		11.65	□□□□□ -0.54
LDHB-204	ENST00000450584	TLR7	Q9NYK1	1049 aa	Known RBP	11.65	□□□□□ -0.54
LDHB-204	ENST00000450584	JAG2	Q9Y219	1238 aa		11.65	□□□□□ -0.54
LDHB-204	ENST00000450584	GOLIM4	O00461	696 aa		11.64	□□□□□ -0.55
LDHB-204	ENST00000450584	SGSM2	O43147	1006 aa		11.64	□□□□□ -0.55
LDHB-204	ENST00000450584	CYP2C8	P10632	490 aa		11.64	□□□□□ -0.55
LDHB-204	ENST00000450584	FOSL2	P15408	326 aa		11.64	□□□□□ -0.55
LDHB-204	ENST00000450584	PPIL2	Q13356	520 aa		11.64	□□□□□ -0.55
LDHB-204	ENST00000450584	ANKRD23	Q86SG2	305 aa		11.64	□□□□□ -0.55
LDHB-204	ENST00000450584	ERO1B	Q86YB8	467 aa		11.64	□□□□□ -0.55
LDHB-204	ENST00000450584	ANKLE1	Q8NAG6	615 aa		11.64	□□□□□ -0.55
LDHB-204	ENST00000450584	PXYLP1	Q8TE99	480 aa		11.64	□□□□□ -0.55
LDHB-204	ENST00000450584	CD209	Q9NNX6	404 aa		11.64	□□□□□ -0.55
LDHB-204	ENST00000450584	BSDC1	Q9NW68	430 aa	Predicted RBP	11.64	□□□□□ -0.55
LDHB-204	ENST00000450584	ZNF70	Q9UC06	446 aa	Predicted RBP	11.64	□□□□□ -0.55
LDHB-204	ENST00000450584	XIRP2	A4UGR9	3374 aa		11.64	□□□□□ -0.55
LDHB-204	ENST00000450584	SNAP23	O00161	211 aa		11.63	□□□□□ -0.55
LDHB-204	ENST00000450584	FRAT2	O75474	233 aa	Predicted RBP	11.63	□□□□□ -0.55
LDHB-204	ENST00000450584	KBTBD3	Q8NAB2	608 aa		11.63	□□□□□ -0.55
LDHB-204	ENST00000450584	SNX21	Q969T3	373 aa		11.63	□□□□□ -0.55
LDHB-204	ENST00000450584	TDRD3	Q9H7E2	651 aa	Known RBP	11.63	□□□□□ -0.55
LDHB-204	ENST00000450584	TCP10L2	B9ZVM9	353 aa		11.62	□□□□□ -0.55
LDHB-204	ENST00000450584	CAPN2	P17655	700 aa		11.62	□□□□□ -0.55
LDHB-204	ENST00000450584	PSMA5	P28066	241 aa		11.62	□□□□□ -0.55
LDHB-204	ENST00000450584	TRIM32	Q13049	653 aa		11.62	□□□□□ -0.55
LDHB-204	ENST00000450584	IRF5	Q13568	498 aa		11.62	□□□□□ -0.55
LDHB-204	ENST00000450584	MCMDC2	Q4G0Z9	681 aa		11.62	□□□□□ -0.55
LDHB-204	ENST00000450584	WRNIP1	Q96S55	665 aa		11.62	□□□□□ -0.55
LDHB-204	ENST00000450584	HELLS	Q9NRZ9	838 aa		11.62	□□□□□ -0.55
LDHB-204	ENST00000450584	LTBP2	Q14767	1821 aa		11.62	□□□□□ -0.55
LDHB-204	ENST00000450584		K7ELQ4	463 aa	Predicted RBP	11.61	□□□□□ -0.55
LDHB-204	ENST00000450584	CHRND	Q07001	517 aa		11.61	□□□□□ -0.55
LDHB-204	ENST00000450584	NMI	Q13287	307 aa	Predicted RBP	11.61	□□□□□ -0.55
LDHB-204	ENST00000450584	UBE4A	Q14139	1066 aa		11.61	□□□□□ -0.55
LDHB-204	ENST00000450584	KRT32	Q14532	448 aa		11.61	□□□□□ -0.55
LDHB-204	ENST00000450584	LRRC26	Q2I0M4	334 aa		11.61	□□□□□ -0.55
LDHB-204	ENST00000450584	GPAT2	Q6NUI2	795 aa		11.61	□□□□□ -0.55
LDHB-204	ENST00000450584	ZNF512B	Q96KM6	892 aa	Predicted RBP	11.61	□□□□□ -0.55
LDHB-204	ENST00000450584	HMG20B	Q9P0W2	317 aa		11.61	□□□□□ -0.55
LDHB-204	ENST00000450584	TAOK2	Q9UL54	1235 aa		11.61	□□□□□ -0.55
LDHB-204	ENST00000450584	LEMD3	Q9Y2U8	911 aa		11.61	□□□□□ -0.55
LDHB-204	ENST00000450584		A0A1B0GUL6	1792 aa		11.6	□□□□□ -0.55
LDHB-204	ENST00000450584	MAST2	Q6P0Q8	1798 aa		11.6	□□□□□ -0.55
LDHB-204	ENST00000450584	COL6A1	P12109	1028 aa		11.6	□□□□□ -0.55
LDHB-204	ENST00000450584	RBM5	P52756	815 aa	Known RBP eCLIP	11.6	□□□□□ -0.55
LDHB-204	ENST00000450584	TNFAIP1	Q13829	316 aa		11.6	□□□□□ -0.55
LDHB-204	ENST00000450584	TBC1D2	Q9BYX2	928 aa		11.6	□□□□□ -0.55
LDHB-204	ENST00000450584	CCDC171	Q6TFL3	1326 aa		11.6	□□□□□ -0.55
LDHB-204	ENST00000450584	REV3L	O60673	3130 aa		11.59	□□□□□ -0.55
LDHB-204	ENST00000450584	MYH7	P12883	1935 aa		11.59	□□□□□ -0.55
LDHB-204	ENST00000450584	TNPO2	O14787	897 aa	Known RBP	11.59	□□□□□ -0.55
LDHB-204	ENST00000450584	RNF113A	O15541	343 aa	Known RBP	11.59	□□□□□ -0.55
LDHB-204	ENST00000450584	INPP5B	P32019	993 aa		11.59	□□□□□ -0.55
LDHB-204	ENST00000450584	HSPA4	P34932	840 aa		11.59	□□□□□ -0.55
LDHB-204	ENST00000450584	NEK4	P51957	841 aa		11.59	□□□□□ -0.55
LDHB-204	ENST00000450584	CACNB3	P54284	484 aa		11.59	□□□□□ -0.55
LDHB-204	ENST00000450584	C9orf50	Q5SZB4	431 aa		11.59	□□□□□ -0.55
LDHB-204	ENST00000450584	ADAMTS19	Q8TE59	1207 aa		11.59	□□□□□ -0.55
LDHB-204	ENST00000450584	CTNNA3	Q9UI47	895 aa		11.59	□□□□□ -0.55
LDHB-204	ENST00000450584	OGDHL	Q9ULD0	1010 aa		11.59	□□□□□ -0.55
LDHB-204	ENST00000450584	KCNH4	Q9UQ05	1017 aa		11.59	□□□□□ -0.55
LDHB-204	ENST00000450584	ADORA1	P30542	326 aa		11.58	□□□□□ -0.56
LDHB-204	ENST00000450584	SLC4A3	P48751	1232 aa		11.58	□□□□□ -0.56
LDHB-204	ENST00000450584	PPAT	Q06203	517 aa		11.58	□□□□□ -0.56
LDHB-204	ENST00000450584	SHH	Q15465	462 aa		11.58	□□□□□ -0.56
LDHB-204	ENST00000450584	CCDC102B	Q68D86	513 aa		11.58	□□□□□ -0.56
LDHB-204	ENST00000450584	PARK7	Q99497	189 aa	Known RBP	11.58	□□□□□ -0.56
LDHB-204	ENST00000450584	MYH13	Q9UKX3	1938 aa		11.57	□□□□□ -0.56
LDHB-204	ENST00000450584	CHD9	Q3L8U1	2897 aa		11.57	□□□□□ -0.56
LDHB-204	ENST00000450584	SEMA3E	O15041	775 aa		11.57	□□□□□ -0.56
LDHB-204	ENST00000450584	TAF5L	O75529	589 aa		11.57	□□□□□ -0.56
LDHB-204	ENST00000450584	IDH1	O75874	414 aa	Known RBP	11.57	□□□□□ -0.56
LDHB-204	ENST00000450584	IL1R1	P14778	569 aa		11.57	□□□□□ -0.56
LDHB-204	ENST00000450584	ARID4A	P29374	1257 aa	Predicted RBP	11.57	□□□□□ -0.56
LDHB-204	ENST00000450584	FKBP1A	P62942	108 aa	Known RBP	11.57	□□□□□ -0.56
LDHB-204	ENST00000450584	FGD1	P98174	961 aa		11.57	□□□□□ -0.56
LDHB-204	ENST00000450584	ANKRD1	Q15327	319 aa		11.57	□□□□□ -0.56
LDHB-204	ENST00000450584	ALYREF	Q86V81	257 aa	Known RBP	11.57	□□□□□ -0.56
LDHB-204	ENST00000450584	VGLL2	Q8N8G2	317 aa		11.57	□□□□□ -0.56
LDHB-204	ENST00000450584	SPATA5	Q8NB90	893 aa		11.57	□□□□□ -0.56
LDHB-204	ENST00000450584	CHMP4C	Q96CF2	233 aa		11.57	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms