RNA–Protein interactions for RNA: ENST00000449600.1

NPHP1-208, Transcript of nephrocystin 1, humanhuman

TSL 3

Gene NPHP1, Length 486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-208ENST00000449600 NR3C2P08235 984 aa9.93□□□□□ -0.82
NPHP1-208ENST00000449600 IFIT2P09913 472 aaKnown RBP9.93□□□□□ -0.82
NPHP1-208ENST00000449600 PLA2G5P39877 138 aa9.93□□□□□ -0.82
NPHP1-208ENST00000449600 CASP7P55210 303 aa9.93□□□□□ -0.82
NPHP1-208ENST00000449600 TBC1D10BQ4KMP7 808 aaPredicted RBP9.93□□□□□ -0.82
NPHP1-208ENST00000449600 CASC1Q6TDU7 716 aa9.93□□□□□ -0.82
NPHP1-208ENST00000449600 DEFB123Q8N688 67 aa9.93□□□□□ -0.82
NPHP1-208ENST00000449600 RHPN1Q8TCX5 695 aa9.93□□□□□ -0.82
NPHP1-208ENST00000449600 RPGRQ92834 1020 aaKnown RBP9.93□□□□□ -0.82
NPHP1-208ENST00000449600 ITPKCQ96DU7 683 aa9.93□□□□□ -0.82
NPHP1-208ENST00000449600 ERO1AQ96HE7 468 aa9.93□□□□□ -0.82
NPHP1-208ENST00000449600 UPF2Q9HAU5 1272 aaKnown RBP9.93□□□□□ -0.82
NPHP1-208ENST00000449600 MTMR10Q9NXD2 777 aa9.93□□□□□ -0.82
NPHP1-208ENST00000449600 SMARCA5O60264 1052 aaPredicted RBP9.92□□□□□ -0.82
NPHP1-208ENST00000449600 ZIC2O95409 532 aaPredicted RBP9.92□□□□□ -0.82
NPHP1-208ENST00000449600 CTSWP56202 376 aa9.92□□□□□ -0.82
NPHP1-208ENST00000449600 INHBEP58166 350 aa9.92□□□□□ -0.82
NPHP1-208ENST00000449600 KCNMA1Q12791 1236 aa9.92□□□□□ -0.82
NPHP1-208ENST00000449600 CCDC152Q4G0S7 254 aa9.92□□□□□ -0.82
NPHP1-208ENST00000449600 EPHA10Q5JZY3 1008 aa9.92□□□□□ -0.82
NPHP1-208ENST00000449600 SUSD4Q5VX71 490 aa9.92□□□□□ -0.82
NPHP1-208ENST00000449600 NBPF11Q86T75 865 aa9.92□□□□□ -0.82
NPHP1-208ENST00000449600 RBM17Q96I25 401 aaKnown RBP9.92□□□□□ -0.82
NPHP1-208ENST00000449600 SIL1Q9H173 461 aa9.92□□□□□ -0.82
NPHP1-208ENST00000449600 COPRSQ9NQ92 184 aa9.92□□□□□ -0.82
NPHP1-208ENST00000449600 GGA3Q9NZ52 723 aa9.92□□□□□ -0.82
NPHP1-208ENST00000449600 ERC2O15083 957 aa9.91□□□□□ -0.82
NPHP1-208ENST00000449600 PPFIA3O75145 1194 aa9.91□□□□□ -0.82
NPHP1-208ENST00000449600 GJA5P36382 358 aa9.91□□□□□ -0.82
NPHP1-208ENST00000449600 FOXO4P98177 505 aa9.91□□□□□ -0.82
NPHP1-208ENST00000449600 C4orf48Q5BLP8 95 aa9.91□□□□□ -0.82
NPHP1-208ENST00000449600 UBE2Q1Q7Z7E8 422 aa9.91□□□□□ -0.82
NPHP1-208ENST00000449600 SKAP1Q86WV1 359 aa9.91□□□□□ -0.82
NPHP1-208ENST00000449600 DPF3Q92784 378 aa9.91□□□□□ -0.82
NPHP1-208ENST00000449600 KAZALD1Q96I82 304 aa9.91□□□□□ -0.82
NPHP1-208ENST00000449600 TMX4Q9H1E5 349 aaPredicted RBP9.91□□□□□ -0.82
NPHP1-208ENST00000449600 EFCC1Q9HA90 598 aa9.91□□□□□ -0.82
NPHP1-208ENST00000449600 IL1RAPL2Q9NP60 686 aa9.91□□□□□ -0.82
NPHP1-208ENST00000449600 MAP10Q9P2G4 905 aa9.91□□□□□ -0.82
NPHP1-208ENST00000449600 PA2G4Q9UQ80 394 aaKnown RBP9.91□□□□□ -0.82
NPHP1-208ENST00000449600 NR2E3Q9Y5X4 410 aa9.91□□□□□ -0.82
NPHP1-208ENST00000449600 UBN2Q6ZU65 1347 aa9.9□□□□□ -0.82
NPHP1-208ENST00000449600 TTC28Q96AY4 2481 aa9.9□□□□□ -0.82
NPHP1-208ENST00000449600 CFAP99D6REC4 459 aa9.9□□□□□ -0.82
NPHP1-208ENST00000449600 CIAO1O76071 339 aa9.9□□□□□ -0.82
NPHP1-208ENST00000449600 MX1P20591 662 aa9.9□□□□□ -0.82
NPHP1-208ENST00000449600 IL15P40933 162 aaPredicted RBP9.9□□□□□ -0.82
NPHP1-208ENST00000449600 GRM5P41594 1212 aa9.9□□□□□ -0.82
NPHP1-208ENST00000449600 SUZ12Q15022 739 aaKnown RBP9.9□□□□□ -0.82
NPHP1-208ENST00000449600 AMHR2Q16671 573 aa9.9□□□□□ -0.82
NPHP1-208ENST00000449600 KIF4BQ2VIQ3 1234 aa9.9□□□□□ -0.82
NPHP1-208ENST00000449600 SLC4A8Q2Y0W8 1093 aa9.9□□□□□ -0.82
NPHP1-208ENST00000449600 BMP2KLQ5H9B9 411 aa9.9□□□□□ -0.82
NPHP1-208ENST00000449600 AACSQ86V21 672 aa9.9□□□□□ -0.82
NPHP1-208ENST00000449600 CNNM1Q9NRU3 951 aa9.9□□□□□ -0.82
NPHP1-208ENST00000449600 CEP126Q9P2H0 1117 aa9.9□□□□□ -0.82
NPHP1-208ENST00000449600 NUP98P52948 1817 aa9.9□□□□□ -0.82
NPHP1-208ENST00000449600 ANKRD36CQ5JPF3 1778 aa9.9□□□□□ -0.82
NPHP1-208ENST00000449600 EYSQ5T1H1 3165 aa9.89□□□□□ -0.83
NPHP1-208ENST00000449600 AOX1Q06278 1338 aa9.89□□□□□ -0.83
NPHP1-208ENST00000449600 WTIPA6NIX2 430 aaPredicted RBP9.89□□□□□ -0.83
NPHP1-208ENST00000449600 UBE2Q2LH0YL09 131 aa9.89□□□□□ -0.83
NPHP1-208ENST00000449600 EYA2O00167 538 aa9.89□□□□□ -0.83
NPHP1-208ENST00000449600 PSMD14O00487 310 aa9.89□□□□□ -0.83
NPHP1-208ENST00000449600 NTSR2O95665 410 aa9.89□□□□□ -0.83
NPHP1-208ENST00000449600 CSF1RP07333 972 aa9.89□□□□□ -0.83
NPHP1-208ENST00000449600 CTHP32929 405 aa9.89□□□□□ -0.83
NPHP1-208ENST00000449600 IGHMBP2P38935 993 aaKnown RBP9.89□□□□□ -0.83
NPHP1-208ENST00000449600 PTPN12Q05209 780 aaKnown RBP9.89□□□□□ -0.83
NPHP1-208ENST00000449600 NR5A1Q13285 461 aa9.89□□□□□ -0.83
NPHP1-208ENST00000449600 SLC9C1Q4G0N8 1177 aa9.89□□□□□ -0.83
NPHP1-208ENST00000449600 RSBN1LQ6PCB5 846 aaPredicted RBP9.89□□□□□ -0.83
NPHP1-208ENST00000449600 DPP8Q6V1X1 898 aaPredicted RBP9.89□□□□□ -0.83
NPHP1-208ENST00000449600 PLEKHM2Q8IWE5 1019 aa9.89□□□□□ -0.83
NPHP1-208ENST00000449600 NLRP3Q96P20 1036 aa9.89□□□□□ -0.83
NPHP1-208ENST00000449600 CDC5LQ99459 802 aaKnown RBP9.89□□□□□ -0.83
NPHP1-208ENST00000449600 MPHOSPH8Q99549 860 aa9.89□□□□□ -0.83
NPHP1-208ENST00000449600 AKAP2Q9Y2D5 859 aa9.89□□□□□ -0.83
NPHP1-208ENST00000449600 POLR2AP24928 1970 aaKnown RBP9.88□□□□□ -0.83
NPHP1-208ENST00000449600 ASTN2O75129 1339 aaPredicted RBP9.88□□□□□ -0.83
NPHP1-208ENST00000449600 TTC41PQ6P2S7 1318 aa9.88□□□□□ -0.83
NPHP1-208ENST00000449600 MAN1A2O60476 641 aa9.88□□□□□ -0.83
NPHP1-208ENST00000449600 GLRX3O76003 335 aaKnown RBP9.88□□□□□ -0.83
NPHP1-208ENST00000449600 HCLS1P14317 486 aaPredicted RBP9.88□□□□□ -0.83
NPHP1-208ENST00000449600 ITGA6P23229 1130 aa9.88□□□□□ -0.83
NPHP1-208ENST00000449600 BMP8BP34820 402 aa9.88□□□□□ -0.83
NPHP1-208ENST00000449600 RFX5P48382 616 aaPredicted RBP9.88□□□□□ -0.83
NPHP1-208ENST00000449600 PDE1AP54750 535 aa9.88□□□□□ -0.83
NPHP1-208ENST00000449600 CAP1Q01518 475 aa9.88□□□□□ -0.83
NPHP1-208ENST00000449600 LRIT3Q3SXY7 679 aa9.88□□□□□ -0.83
NPHP1-208ENST00000449600 C6orf118Q5T5N4 469 aa9.88□□□□□ -0.83
NPHP1-208ENST00000449600 GORABQ5T7V8 394 aa9.88□□□□□ -0.83
NPHP1-208ENST00000449600 TTC22Q5TAA0 569 aa9.88□□□□□ -0.83
NPHP1-208ENST00000449600 LDHAL6AQ6ZMR3 332 aa9.88□□□□□ -0.83
NPHP1-208ENST00000449600 MOB2Q70IA6 237 aa9.88□□□□□ -0.83
NPHP1-208ENST00000449600 SP8Q8IXZ3 490 aa9.88□□□□□ -0.83
NPHP1-208ENST00000449600 MEIOBQ8N635 442 aa9.88□□□□□ -0.83
NPHP1-208ENST00000449600 TTLL11Q8NHH1 800 aa9.88□□□□□ -0.83
NPHP1-208ENST00000449600 CD99L2Q8TCZ2 262 aa9.88□□□□□ -0.83
NPHP1-208ENST00000449600 SHISA4Q96DD7 197 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms