RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 PABPC4Q13310 644 aaKnown RBP eCLIP11.38□□□□□ -0.59
SCN10A-201ENST00000449082 KRT40Q6A162 431 aa11.38□□□□□ -0.59
SCN10A-201ENST00000449082 HACE1Q8IYU2 909 aa11.38□□□□□ -0.59
SCN10A-201ENST00000449082 NUP58Q9BVL2 599 aa11.38□□□□□ -0.59
SCN10A-201ENST00000449082 VPS16Q9H269 839 aa11.38□□□□□ -0.59
SCN10A-201ENST00000449082 SYNRGQ9UMZ2 1314 aa11.38□□□□□ -0.59
SCN10A-201ENST00000449082 GTF2F1P35269 517 aaKnown RBP eCLIP11.38□□□□□ -0.59
SCN10A-201ENST00000449082 GNPTABQ3T906 1256 aa11.38□□□□□ -0.59
SCN10A-201ENST00000449082 CABP7Q86V35 215 aa11.38□□□□□ -0.59
SCN10A-201ENST00000449082 MLH3Q9UHC1 1453 aa11.38□□□□□ -0.59
SCN10A-201ENST00000449082 ADGBQ8N7X0 1667 aa11.38□□□□□ -0.59
SCN10A-201ENST00000449082 VAV2P52735 878 aa11.38□□□□□ -0.59
SCN10A-201ENST00000449082 IGSF22Q8N9C0 903 aa11.38□□□□□ -0.59
SCN10A-201ENST00000449082 MLKLQ8NB16 471 aa11.38□□□□□ -0.59
SCN10A-201ENST00000449082 CCDC26Q8TAB7 109 aa11.37□□□□□ -0.59
SCN10A-201ENST00000449082 MAP3K15Q6ZN16 1313 aa11.37□□□□□ -0.59
SCN10A-201ENST00000449082 ARHGAP27Q6ZUM4 889 aa11.37□□□□□ -0.59
SCN10A-201ENST00000449082 IL17REQ8NFR9 667 aa11.37□□□□□ -0.59
SCN10A-201ENST00000449082 TMEM94Q12767 1356 aa11.37□□□□□ -0.59
SCN10A-201ENST00000449082 MCM6Q14566 821 aa11.37□□□□□ -0.59
SCN10A-201ENST00000449082 CEP128Q6ZU80 1094 aa11.37□□□□□ -0.59
SCN10A-201ENST00000449082 NT5C3AQ9H0P0 336 aa11.37□□□□□ -0.59
SCN10A-201ENST00000449082 PNMA2Q9UL42 364 aa11.37□□□□□ -0.59
SCN10A-201ENST00000449082 LOC102724428A0A0B4J2F2 783 aa11.37□□□□□ -0.59
SCN10A-201ENST00000449082 USP17L12C9JPN9 530 aa11.37□□□□□ -0.59
SCN10A-201ENST00000449082 USP17L21D6R901 530 aa11.37□□□□□ -0.59
SCN10A-201ENST00000449082 SIK1P57059 783 aa11.37□□□□□ -0.59
SCN10A-201ENST00000449082 INF2Q27J81 1249 aa11.37□□□□□ -0.59
SCN10A-201ENST00000449082 FAM135BQ49AJ0 1406 aa11.37□□□□□ -0.59
SCN10A-201ENST00000449082 TTLL7Q6ZT98 887 aa11.37□□□□□ -0.59
SCN10A-201ENST00000449082 DCPSQ96C86 337 aaKnown RBP11.37□□□□□ -0.59
SCN10A-201ENST00000449082 FAM204AQ9H8W3 233 aa11.37□□□□□ -0.59
SCN10A-201ENST00000449082 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.37□□□□□ -0.59
SCN10A-201ENST00000449082 LPXNO60711 386 aa11.37□□□□□ -0.59
SCN10A-201ENST00000449082 GCNT3O95395 438 aa11.37□□□□□ -0.59
SCN10A-201ENST00000449082 KIF22Q14807 665 aa11.37□□□□□ -0.59
SCN10A-201ENST00000449082 MRPL44Q9H9J2 332 aaKnown RBP11.37□□□□□ -0.59
SCN10A-201ENST00000449082 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.37□□□□□ -0.59
SCN10A-201ENST00000449082 SMCO2A6NFE2 343 aa11.36□□□□□ -0.59
SCN10A-201ENST00000449082 DAPK3O43293 454 aa11.36□□□□□ -0.59
SCN10A-201ENST00000449082 GYG1P46976 350 aa11.36□□□□□ -0.59
SCN10A-201ENST00000449082 CCDC25Q86WR0 208 aa11.36□□□□□ -0.59
SCN10A-201ENST00000449082 SELENOSQ9BQE4 189 aa11.36□□□□□ -0.59
SCN10A-201ENST00000449082 PLEKHG1Q9ULL1 1385 aa11.36□□□□□ -0.59
SCN10A-201ENST00000449082 MYO5CQ9NQX4 1742 aa11.36□□□□□ -0.59
SCN10A-201ENST00000449082 EXOC3O60645 756 aa11.36□□□□□ -0.59
SCN10A-201ENST00000449082 TUBBP07437 444 aa11.36□□□□□ -0.59
SCN10A-201ENST00000449082 ERCC5P28715 1186 aaPredicted RBP11.36□□□□□ -0.59
SCN10A-201ENST00000449082 ARHGEF16Q5VV41 709 aa11.36□□□□□ -0.59
SCN10A-201ENST00000449082 ZNF772Q68DY9 489 aaPredicted RBP11.36□□□□□ -0.59
SCN10A-201ENST00000449082 CYP26C1Q6V0L0 522 aa11.36□□□□□ -0.59
SCN10A-201ENST00000449082 FNBP4Q8N3X1 1017 aaPredicted RBP11.36□□□□□ -0.59
SCN10A-201ENST00000449082 IFT81Q8WYA0 676 aa11.36□□□□□ -0.59
SCN10A-201ENST00000449082 ZKSCAN5Q9Y2L8 839 aa11.36□□□□□ -0.59
SCN10A-201ENST00000449082 KDM3AQ9Y4C1 1321 aa11.36□□□□□ -0.59
SCN10A-201ENST00000449082 KCNQ3O43525 872 aa11.36□□□□□ -0.59
SCN10A-201ENST00000449082 CARD10Q9BWT7 1032 aa11.36□□□□□ -0.59
SCN10A-201ENST00000449082 MAPK8IP1Q9UQF2 711 aa11.36□□□□□ -0.59
SCN10A-201ENST00000449082 MRPL11Q9Y3B7 192 aaKnown RBP11.36□□□□□ -0.59
SCN10A-201ENST00000449082 EFCAB6Q5THR3 1501 aa11.36□□□□□ -0.59
SCN10A-201ENST00000449082 YEATS2Q9ULM3 1422 aa11.36□□□□□ -0.59
SCN10A-201ENST00000449082 E7EVH7 732 aa11.36□□□□□ -0.59
SCN10A-201ENST00000449082 GAS7O60861 476 aa11.36□□□□□ -0.59
SCN10A-201ENST00000449082 OTUD7BQ6GQQ9 843 aa11.36□□□□□ -0.59
SCN10A-201ENST00000449082 DYMQ7RTS9 669 aa11.36□□□□□ -0.59
SCN10A-201ENST00000449082 ZNF654Q8IZM8 581 aa11.36□□□□□ -0.59
SCN10A-201ENST00000449082 GPR161Q8N6U8 529 aaKnown RBP11.36□□□□□ -0.59
SCN10A-201ENST00000449082 ZSCAN10Q96SZ4 725 aaPredicted RBP11.36□□□□□ -0.59
SCN10A-201ENST00000449082 CLSTN2Q9H4D0 955 aa11.36□□□□□ -0.59
SCN10A-201ENST00000449082 ODF2LQ9ULJ1 636 aa11.36□□□□□ -0.59
SCN10A-201ENST00000449082 KCNJ14Q9UNX9 436 aa11.36□□□□□ -0.59
SCN10A-201ENST00000449082 NPHP4O75161 1426 aaPredicted RBP11.36□□□□□ -0.59
SCN10A-201ENST00000449082 SAMD9Q5K651 1589 aa11.36□□□□□ -0.59
SCN10A-201ENST00000449082 DOK7Q18PE1 504 aa11.36□□□□□ -0.59
SCN10A-201ENST00000449082 USPL1Q5W0Q7 1092 aa11.36□□□□□ -0.59
SCN10A-201ENST00000449082 GLG1Q92896 1179 aa11.36□□□□□ -0.59
SCN10A-201ENST00000449082 PAGR1Q9BTK6 254 aa11.36□□□□□ -0.59
SCN10A-201ENST00000449082 TCP10L2B9ZVM9 353 aa11.35□□□□□ -0.59
SCN10A-201ENST00000449082 STK10O94804 968 aaKnown RBP11.35□□□□□ -0.59
SCN10A-201ENST00000449082 ZBTB16Q05516 673 aa11.35□□□□□ -0.59
SCN10A-201ENST00000449082 CHRNDQ07001 517 aa11.35□□□□□ -0.59
SCN10A-201ENST00000449082 CERKLQ49MI3 558 aaPredicted RBP11.35□□□□□ -0.59
SCN10A-201ENST00000449082 MIER3Q7Z3K6 550 aa11.35□□□□□ -0.59
SCN10A-201ENST00000449082 FAM196AQ6ZSG2 479 aa11.35□□□□□ -0.59
SCN10A-201ENST00000449082 IFNL3Q8IZI9 196 aa11.35□□□□□ -0.59
SCN10A-201ENST00000449082 UBL4BQ8N7F7 174 aa11.35□□□□□ -0.59
SCN10A-201ENST00000449082 VPS54Q9P1Q0 977 aa11.35□□□□□ -0.59
SCN10A-201ENST00000449082 ZNF202O95125 648 aa11.35□□□□□ -0.59
SCN10A-201ENST00000449082 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.35□□□□□ -0.59
SCN10A-201ENST00000449082 SULF1Q8IWU6 871 aa11.35□□□□□ -0.59
SCN10A-201ENST00000449082 KRT222Q8N1A0 295 aa11.35□□□□□ -0.59
SCN10A-201ENST00000449082 ANKS4BQ8N8V4 417 aa11.35□□□□□ -0.59
SCN10A-201ENST00000449082 IWS1Q96ST2 819 aa11.35□□□□□ -0.59
SCN10A-201ENST00000449082 MLXIPQ9HAP2 919 aa11.35□□□□□ -0.59
SCN10A-201ENST00000449082 PRPF6O94906 941 aaKnown RBP11.35□□□□□ -0.59
SCN10A-201ENST00000449082 SEC24BO95487 1268 aa11.35□□□□□ -0.59
SCN10A-201ENST00000449082 BCRP11274 1271 aa11.35□□□□□ -0.59
SCN10A-201ENST00000449082 HSPA4P34932 840 aa11.35□□□□□ -0.59
SCN10A-201ENST00000449082 CRKLP46109 303 aaKnown RBP11.35□□□□□ -0.59
SCN10A-201ENST00000449082 BCAMP50895 628 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms