RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 ARID4AP29374 1257 aaPredicted RBP22.15■■□□□ 1.14
CHCHD3-203ENST00000448878 MNX1P50219 401 aaPredicted RBP22.15■■□□□ 1.14
CHCHD3-203ENST00000448878 SOCS4Q8WXH5 440 aa22.15■■□□□ 1.14
CHCHD3-203ENST00000448878 TXNRD2Q9NNW7 524 aa22.15■■□□□ 1.14
CHCHD3-203ENST00000448878 C19orf81C9J6K1 198 aa22.14■■□□□ 1.13
CHCHD3-203ENST00000448878 PLCG2P16885 1265 aa22.14■■□□□ 1.13
CHCHD3-203ENST00000448878 HOXA7P31268 230 aaPredicted RBP22.14■■□□□ 1.13
CHCHD3-203ENST00000448878 TTC39AQ5SRH9 613 aa22.14■■□□□ 1.13
CHCHD3-203ENST00000448878 MAPK4P31152 587 aa22.13■■□□□ 1.13
CHCHD3-203ENST00000448878 CACNB2Q08289 660 aaPredicted RBP22.13■■□□□ 1.13
CHCHD3-203ENST00000448878 GPR153Q6NV75 609 aa22.13■■□□□ 1.13
CHCHD3-203ENST00000448878 FOXP4Q8IVH2 680 aaPredicted RBP22.13■■□□□ 1.13
CHCHD3-203ENST00000448878 TRMT44Q8IYL2 757 aaKnown RBP22.13■■□□□ 1.13
CHCHD3-203ENST00000448878 SAP30BPQ9UHR5 308 aaKnown RBP22.13■■□□□ 1.13
CHCHD3-203ENST00000448878 PALD1Q9ULE6 856 aa22.13■■□□□ 1.13
CHCHD3-203ENST00000448878 XRCC5P13010 732 aaKnown RBP22.12■■□□□ 1.13
CHCHD3-203ENST00000448878 JAG1P78504 1218 aa22.12■■□□□ 1.13
CHCHD3-203ENST00000448878 MTX1Q13505 466 aa22.12■■□□□ 1.13
CHCHD3-203ENST00000448878 SHROOM1Q2M3G4 852 aaPredicted RBP22.12■■□□□ 1.13
CHCHD3-203ENST00000448878 Q3C1V9 767 aa22.12■■□□□ 1.13
CHCHD3-203ENST00000448878 LRIT3Q3SXY7 679 aa22.12■■□□□ 1.13
CHCHD3-203ENST00000448878 MAP3K21Q5TCX8 1036 aa22.12■■□□□ 1.13
CHCHD3-203ENST00000448878 TRMT2AQ8IZ69 625 aaKnown RBP22.12■■□□□ 1.13
CHCHD3-203ENST00000448878 RBPJLQ9UBG7 517 aa22.12■■□□□ 1.13
CHCHD3-203ENST00000448878 PLXNB2O15031 1838 aa22.12■■□□□ 1.13
CHCHD3-203ENST00000448878 PFASO15067 1338 aa22.11■■□□□ 1.13
CHCHD3-203ENST00000448878 GNAI2P04899 355 aa22.11■■□□□ 1.13
CHCHD3-203ENST00000448878 CCND3P30281 292 aaPredicted RBP22.11■■□□□ 1.13
CHCHD3-203ENST00000448878 RGS2P41220 211 aa22.11■■□□□ 1.13
CHCHD3-203ENST00000448878 RARSP54136 660 aaKnown RBP22.11■■□□□ 1.13
CHCHD3-203ENST00000448878 ERVK-9P63128 1117 aa22.11■■□□□ 1.13
CHCHD3-203ENST00000448878 ERVK-24P63145 666 aa22.11■■□□□ 1.13
CHCHD3-203ENST00000448878 MDM2Q00987 491 aaPredicted RBP22.11■■□□□ 1.13
CHCHD3-203ENST00000448878 CCL14Q16627 93 aa22.11■■□□□ 1.13
CHCHD3-203ENST00000448878 CCDC158Q5M9N0 1113 aa22.11■■□□□ 1.13
CHCHD3-203ENST00000448878 WDR78Q5VTH9 848 aa22.11■■□□□ 1.13
CHCHD3-203ENST00000448878 GPR142Q7Z601 462 aa22.11■■□□□ 1.13
CHCHD3-203ENST00000448878 PLEKHH3Q7Z736 793 aa22.11■■□□□ 1.13
CHCHD3-203ENST00000448878 PORCNQ9H237 461 aa22.11■■□□□ 1.13
CHCHD3-203ENST00000448878 FLT1P17948 1338 aa22.1■■□□□ 1.13
CHCHD3-203ENST00000448878 COL6A3P12111 3177 aa22.1■■□□□ 1.13
CHCHD3-203ENST00000448878 HLA-DOAP06340 250 aa22.1■■□□□ 1.13
CHCHD3-203ENST00000448878 OS9Q13438 667 aaPredicted RBP22.1■■□□□ 1.13
CHCHD3-203ENST00000448878 ZYXQ15942 572 aaKnown RBP22.1■■□□□ 1.13
CHCHD3-203ENST00000448878 PNMA6EA0A0J9YXQ4 647 aa22.09■■□□□ 1.13
CHCHD3-203ENST00000448878 USP17L2Q6R6M4 530 aa22.09■■□□□ 1.13
CHCHD3-203ENST00000448878 ARHGAP45Q92619 1136 aa22.09■■□□□ 1.13
CHCHD3-203ENST00000448878 FRAT1Q92837 279 aaPredicted RBP22.09■■□□□ 1.13
CHCHD3-203ENST00000448878 DNAJC18Q9H819 358 aa22.09■■□□□ 1.13
CHCHD3-203ENST00000448878 MTMR10Q9NXD2 777 aa22.09■■□□□ 1.13
CHCHD3-203ENST00000448878 ZBTB21Q9ULJ3 1066 aa22.09■■□□□ 1.13
CHCHD3-203ENST00000448878 STXBP5LQ9Y2K9 1186 aa22.09■■□□□ 1.13
CHCHD3-203ENST00000448878 NDUFB9Q9Y6M9 179 aa22.09■■□□□ 1.13
CHCHD3-203ENST00000448878 LRRC26Q2I0M4 334 aa22.08■■□□□ 1.13
CHCHD3-203ENST00000448878 ATF7IPQ6VMQ6 1270 aa22.08■■□□□ 1.13
CHCHD3-203ENST00000448878 GTF3C2Q8WUA4 911 aaPredicted RBP22.08■■□□□ 1.13
CHCHD3-203ENST00000448878 FEZ1Q99689 392 aa22.08■■□□□ 1.13
CHCHD3-203ENST00000448878 CNGA1P29973 690 aa22.07■■□□□ 1.12
CHCHD3-203ENST00000448878 PPP4CP60510 307 aa22.07■■□□□ 1.12
CHCHD3-203ENST00000448878 ADGRA1Q86SQ6 560 aa22.07■■□□□ 1.12
CHCHD3-203ENST00000448878 CLUAP1Q96AJ1 413 aa22.07■■□□□ 1.12
CHCHD3-203ENST00000448878 EDC3Q96F86 508 aaKnown RBP22.07■■□□□ 1.12
CHCHD3-203ENST00000448878 APBA2Q99767 749 aa22.07■■□□□ 1.12
CHCHD3-203ENST00000448878 EMILIN3Q9NT22 766 aa22.07■■□□□ 1.12
CHCHD3-203ENST00000448878 GINM1Q9NU53 330 aa22.07■■□□□ 1.12
CHCHD3-203ENST00000448878 IPO8O15397 1037 aaKnown RBP22.06■■□□□ 1.12
CHCHD3-203ENST00000448878 GLRX3O76003 335 aaKnown RBP22.06■■□□□ 1.12
CHCHD3-203ENST00000448878 GH2P01242 217 aa22.06■■□□□ 1.12
CHCHD3-203ENST00000448878 DYNLL1P63167 89 aaKnown RBP22.06■■□□□ 1.12
CHCHD3-203ENST00000448878 CCNA1P78396 465 aa22.06■■□□□ 1.12
CHCHD3-203ENST00000448878 MORN1Q5T089 497 aa22.06■■□□□ 1.12
CHCHD3-203ENST00000448878 LHX8Q68G74 356 aa22.06■■□□□ 1.12
CHCHD3-203ENST00000448878 USP6NLQ92738 828 aa22.06■■□□□ 1.12
CHCHD3-203ENST00000448878 LBHD1Q9BQE6 289 aaPredicted RBP22.06■■□□□ 1.12
CHCHD3-203ENST00000448878 DBNDD2Q9BQY9 259 aa22.06■■□□□ 1.12
CHCHD3-203ENST00000448878 SENP6Q9GZR1 1112 aaPredicted RBP22.06■■□□□ 1.12
CHCHD3-203ENST00000448878 LAMA3Q16787 3333 aa22.05■■□□□ 1.12
CHCHD3-203ENST00000448878 CYP2E1P05181 493 aaPredicted RBP22.05■■□□□ 1.12
CHCHD3-203ENST00000448878 COL6A1P12109 1028 aa22.05■■□□□ 1.12
CHCHD3-203ENST00000448878 USP5P45974 858 aa22.05■■□□□ 1.12
CHCHD3-203ENST00000448878 MAP2K5Q13163 448 aa22.05■■□□□ 1.12
CHCHD3-203ENST00000448878 TNNI3KQ59H18 835 aa22.05■■□□□ 1.12
CHCHD3-203ENST00000448878 MFSD14CQ5VZR4 134 aa22.05■■□□□ 1.12
CHCHD3-203ENST00000448878 TNNQ9UQP3 1299 aa22.05■■□□□ 1.12
CHCHD3-203ENST00000448878 FPGT-TNNI3KV9GXZ4 949 aa22.05■■□□□ 1.12
CHCHD3-203ENST00000448878 SIPA1L1O43166 1804 aa22.05■■□□□ 1.12
CHCHD3-203ENST00000448878 USP17L15C9J2P7 530 aa22.04■■□□□ 1.12
CHCHD3-203ENST00000448878 USP17L13C9JLJ4 530 aa22.04■■□□□ 1.12
CHCHD3-203ENST00000448878 USP17L11C9JVI0 530 aa22.04■■□□□ 1.12
CHCHD3-203ENST00000448878 USP17L18D6R9N7 530 aa22.04■■□□□ 1.12
CHCHD3-203ENST00000448878 USP17L22D6RA61 530 aa22.04■■□□□ 1.12
CHCHD3-203ENST00000448878 USP17L17D6RBQ6 530 aa22.04■■□□□ 1.12
CHCHD3-203ENST00000448878 USP17L19D6RCP7 530 aa22.04■■□□□ 1.12
CHCHD3-203ENST00000448878 USP17L20D6RJB6 530 aa22.04■■□□□ 1.12
CHCHD3-203ENST00000448878 CYP7A1P22680 504 aa22.04■■□□□ 1.12
CHCHD3-203ENST00000448878 ZAP70P43403 619 aa22.04■■□□□ 1.12
CHCHD3-203ENST00000448878 USP17L24Q0WX57 530 aa22.04■■□□□ 1.12
CHCHD3-203ENST00000448878 RAB3GAP1Q15042 981 aa22.04■■□□□ 1.12
CHCHD3-203ENST00000448878 METTL16Q86W50 562 aaKnown RBP22.04■■□□□ 1.12
CHCHD3-203ENST00000448878 RABGAP1Q9Y3P9 1069 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms