RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 IFNL3Q8IZI9 196 aa16.75■□□□□ 0.27
GTF3C3-206ENST00000448539 GINM1Q9NU53 330 aa16.75■□□□□ 0.27
GTF3C3-206ENST00000448539 CCDC171Q6TFL3 1326 aa16.74■□□□□ 0.27
GTF3C3-206ENST00000448539 CYP2D7A0A087X1C5 515 aa16.74■□□□□ 0.27
GTF3C3-206ENST00000448539 USP17L5A8MUK1 530 aa16.74■□□□□ 0.27
GTF3C3-206ENST00000448539 GDF11O95390 407 aa16.74■□□□□ 0.27
GTF3C3-206ENST00000448539 GABPAQ06546 454 aa16.74■□□□□ 0.27
GTF3C3-206ENST00000448539 TATDN1Q6P1N9 297 aa16.74■□□□□ 0.27
GTF3C3-206ENST00000448539 RUFY2Q8WXA3 655 aa16.74■□□□□ 0.27
GTF3C3-206ENST00000448539 TBC1D2Q9BYX2 928 aa16.74■□□□□ 0.27
GTF3C3-206ENST00000448539 AS3MTQ9HBK9 375 aa16.74■□□□□ 0.27
GTF3C3-206ENST00000448539 EPB41L4AQ9HCS5 686 aaPredicted RBP16.74■□□□□ 0.27
GTF3C3-206ENST00000448539 CABP5Q9NP86 173 aa16.74■□□□□ 0.27
GTF3C3-206ENST00000448539 CCL15-CCL14A0A0B4J2E2 113 aa16.73■□□□□ 0.27
GTF3C3-206ENST00000448539 CXCL11O14625 94 aa16.73■□□□□ 0.27
GTF3C3-206ENST00000448539 ALDH1A1P00352 501 aa16.73■□□□□ 0.27
GTF3C3-206ENST00000448539 SLC3A2P08195 630 aaKnown RBP16.73■□□□□ 0.27
GTF3C3-206ENST00000448539 RRP1BQ14684 758 aaKnown RBP16.73■□□□□ 0.27
GTF3C3-206ENST00000448539 CCL15Q16663 113 aa16.73■□□□□ 0.27
GTF3C3-206ENST00000448539 ABCB5Q2M3G0 1257 aa16.73■□□□□ 0.27
GTF3C3-206ENST00000448539 SKAP1Q86WV1 359 aa16.73■□□□□ 0.27
GTF3C3-206ENST00000448539 DYNLL2Q96FJ2 89 aa16.73■□□□□ 0.27
GTF3C3-206ENST00000448539 ZNF287Q9HBT7 754 aa16.73■□□□□ 0.27
GTF3C3-206ENST00000448539 TRIM75PA6NK02 468 aa16.72■□□□□ 0.27
GTF3C3-206ENST00000448539 MPHOSPH10O00566 681 aaKnown RBP16.72■□□□□ 0.27
GTF3C3-206ENST00000448539 TRPA1O75762 1119 aa16.72■□□□□ 0.27
GTF3C3-206ENST00000448539 GH2P01242 217 aa16.72■□□□□ 0.27
GTF3C3-206ENST00000448539 SHMT1P34896 483 aa16.72■□□□□ 0.27
GTF3C3-206ENST00000448539 EVX2Q03828 476 aa16.72■□□□□ 0.27
GTF3C3-206ENST00000448539 C16orf86Q6ZW13 317 aa16.72■□□□□ 0.27
GTF3C3-206ENST00000448539 ZNF589Q86UQ0 364 aaPredicted RBP16.72■□□□□ 0.27
GTF3C3-206ENST00000448539 IFNL1Q8IU54 200 aa16.72■□□□□ 0.27
GTF3C3-206ENST00000448539 SLC44A5Q8NCS7 719 aa16.72■□□□□ 0.27
GTF3C3-206ENST00000448539 ABHD8Q96I13 439 aa16.72■□□□□ 0.27
GTF3C3-206ENST00000448539 MS4A4AQ96JQ5 239 aa16.72■□□□□ 0.27
GTF3C3-206ENST00000448539 RNF186Q9NXI6 227 aa16.72■□□□□ 0.27
GTF3C3-206ENST00000448539 SAGE1Q9NXZ1 904 aa16.72■□□□□ 0.27
GTF3C3-206ENST00000448539 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.72■□□□□ 0.27
GTF3C3-206ENST00000448539 ZBTB21Q9ULJ3 1066 aa16.72■□□□□ 0.27
GTF3C3-206ENST00000448539 KCNH4Q9UQ05 1017 aa16.72■□□□□ 0.27
GTF3C3-206ENST00000448539 AFG3L2Q9Y4W6 797 aa16.72■□□□□ 0.27
GTF3C3-206ENST00000448539 DDX60LQ5H9U9 1706 aaKnown RBP16.71■□□□□ 0.27
GTF3C3-206ENST00000448539 SIPA1L1O43166 1804 aa16.71■□□□□ 0.27
GTF3C3-206ENST00000448539 TESPA1A2RU30 521 aaPredicted RBP16.71■□□□□ 0.27
GTF3C3-206ENST00000448539 CDK8P49336 464 aa16.71■□□□□ 0.27
GTF3C3-206ENST00000448539 RAB3GAP1Q15042 981 aa16.71■□□□□ 0.27
GTF3C3-206ENST00000448539 VPS53Q5VIR6 699 aa16.71■□□□□ 0.27
GTF3C3-206ENST00000448539 CCDC84Q86UT8 332 aaPredicted RBP16.71■□□□□ 0.27
GTF3C3-206ENST00000448539 STK11IPQ8N1F8 1099 aa16.71■□□□□ 0.27
GTF3C3-206ENST00000448539 ZNF280CQ8ND82 737 aa16.71■□□□□ 0.27
GTF3C3-206ENST00000448539 BRI3BPQ8WY22 251 aa16.71■□□□□ 0.27
GTF3C3-206ENST00000448539 CCDC17Q96LX7 622 aa16.71■□□□□ 0.27
GTF3C3-206ENST00000448539 MKNK2Q9HBH9 465 aa16.71■□□□□ 0.27
GTF3C3-206ENST00000448539 DOCK1Q14185 1865 aa16.7■□□□□ 0.26
GTF3C3-206ENST00000448539 HSPD1P10809 573 aaKnown RBP16.7■□□□□ 0.26
GTF3C3-206ENST00000448539 KCNA4P22459 653 aa16.7■□□□□ 0.26
GTF3C3-206ENST00000448539 CHMLP26374 656 aa16.7■□□□□ 0.26
GTF3C3-206ENST00000448539 PPARAQ07869 468 aa16.7■□□□□ 0.26
GTF3C3-206ENST00000448539 SPP2Q13103 211 aa16.7■□□□□ 0.26
GTF3C3-206ENST00000448539 ALX1Q15699 326 aa16.7■□□□□ 0.26
GTF3C3-206ENST00000448539 BMP2KLQ5H9B9 411 aa16.7■□□□□ 0.26
GTF3C3-206ENST00000448539 FASTKD5Q7L8L6 764 aaKnown RBP16.7■□□□□ 0.26
GTF3C3-206ENST00000448539 BAZ2AQ9UIF9 1905 aaKnown RBP16.7■□□□□ 0.26
GTF3C3-206ENST00000448539 RAD50Q92878 1312 aa16.7■□□□□ 0.26
GTF3C3-206ENST00000448539 CASP8AP2Q9UKL3 1982 aa16.69■□□□□ 0.26
GTF3C3-206ENST00000448539 IGF2BP3O00425 579 aaKnown RBP eCLIP16.69■□□□□ 0.26
GTF3C3-206ENST00000448539 PDE4BQ07343 736 aa16.69■□□□□ 0.26
GTF3C3-206ENST00000448539 GADL1Q6ZQY3 521 aa16.69■□□□□ 0.26
GTF3C3-206ENST00000448539 WDR18Q9BV38 432 aa16.69■□□□□ 0.26
GTF3C3-206ENST00000448539 ROBO3Q96MS0 1386 aa16.68■□□□□ 0.26
GTF3C3-206ENST00000448539 A0A0G2JLL6 359 aaPredicted RBP16.68■□□□□ 0.26
GTF3C3-206ENST00000448539 BTBD19C9JJ37 291 aa16.68■□□□□ 0.26
GTF3C3-206ENST00000448539 SMIM22K7EJ46 135 aa16.68■□□□□ 0.26
GTF3C3-206ENST00000448539 FGAP02671 866 aa16.68■□□□□ 0.26
GTF3C3-206ENST00000448539 JAG1P78504 1218 aa16.68■□□□□ 0.26
GTF3C3-206ENST00000448539 SHROOM1Q2M3G4 852 aaPredicted RBP16.68■□□□□ 0.26
GTF3C3-206ENST00000448539 TMEM179Q6ZVK1 233 aa16.68■□□□□ 0.26
GTF3C3-206ENST00000448539 PRRT2Q7Z6L0 340 aaPredicted RBP16.68■□□□□ 0.26
GTF3C3-206ENST00000448539 ZNF444Q8N0Y2 327 aaPredicted RBP16.68■□□□□ 0.26
GTF3C3-206ENST00000448539 PTPN18Q99952 460 aa16.68■□□□□ 0.26
GTF3C3-206ENST00000448539 C19orf81C9J6K1 198 aa16.67■□□□□ 0.26
GTF3C3-206ENST00000448539 USP17L10C9JJH3 530 aa16.67■□□□□ 0.26
GTF3C3-206ENST00000448539 FOXP2O15409 715 aa16.67■□□□□ 0.26
GTF3C3-206ENST00000448539 SEPT2Q15019 361 aa16.67■□□□□ 0.26
GTF3C3-206ENST00000448539 TAF1CQ15572 869 aaPredicted RBP16.67■□□□□ 0.26
GTF3C3-206ENST00000448539 CASC1Q6TDU7 716 aa16.67■□□□□ 0.26
GTF3C3-206ENST00000448539 ANKRD23Q86SG2 305 aa16.67■□□□□ 0.26
GTF3C3-206ENST00000448539 FEZ1Q99689 392 aa16.67■□□□□ 0.26
GTF3C3-206ENST00000448539 ZCCHC17Q9NP64 241 aaKnown RBP16.67■□□□□ 0.26
GTF3C3-206ENST00000448539 TMOD4Q9NZQ9 345 aa16.67■□□□□ 0.26
GTF3C3-206ENST00000448539 TBC1D8O95759 1140 aa16.66■□□□□ 0.26
GTF3C3-206ENST00000448539 AKR1B1P15121 316 aa16.66■□□□□ 0.26
GTF3C3-206ENST00000448539 HMGCS2P54868 508 aa16.66■□□□□ 0.26
GTF3C3-206ENST00000448539 BACE1P56817 501 aa16.66■□□□□ 0.26
GTF3C3-206ENST00000448539 MTMR2Q13614 643 aa16.66■□□□□ 0.26
GTF3C3-206ENST00000448539 FAM43AQ8N2R8 423 aa16.66■□□□□ 0.26
GTF3C3-206ENST00000448539 DSCC1Q9BVC3 393 aa16.66■□□□□ 0.26
GTF3C3-206ENST00000448539 ZFYVE28Q9HCC9 887 aa16.66■□□□□ 0.26
GTF3C3-206ENST00000448539 CTNNA3Q9UI47 895 aa16.66■□□□□ 0.26
GTF3C3-206ENST00000448539 ZMYM6O95789 1325 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms