RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 C8orf74Q6P047 294 aa10.29□□□□□ -0.76
SMC6-207ENST00000448223 SPAG5Q96R06 1193 aa10.29□□□□□ -0.76
SMC6-207ENST00000448223 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.29□□□□□ -0.766e-6■■■□□ 19.2
SMC6-207ENST00000448223 ARHGEF10O15013 1369 aa10.29□□□□□ -0.76
SMC6-207ENST00000448223 PLEKHG3A1L390 1219 aa10.29□□□□□ -0.76
SMC6-207ENST00000448223 MICU3Q86XE3 530 aa10.29□□□□□ -0.76
SMC6-207ENST00000448223 CCDC42Q96M95 316 aa10.29□□□□□ -0.76
SMC6-207ENST00000448223 NACAP1Q9BZK3 213 aa10.29□□□□□ -0.76
SMC6-207ENST00000448223 SCINQ9Y6U3 715 aa10.29□□□□□ -0.76
SMC6-207ENST00000448223 DIP2CQ9Y2E4 1556 aa10.29□□□□□ -0.76
SMC6-207ENST00000448223 SBNO1A3KN83 1393 aa10.29□□□□□ -0.76
SMC6-207ENST00000448223 CHUKO15111 745 aa10.29□□□□□ -0.76
SMC6-207ENST00000448223 RNMTO43148 476 aaKnown RBP10.29□□□□□ -0.76
SMC6-207ENST00000448223 GCP02774 474 aa10.29□□□□□ -0.76
SMC6-207ENST00000448223 PCYT1AP49585 367 aa10.29□□□□□ -0.76
SMC6-207ENST00000448223 INF2Q27J81 1249 aa10.29□□□□□ -0.76
SMC6-207ENST00000448223 CCDC122Q5T0U0 273 aa10.29□□□□□ -0.76
SMC6-207ENST00000448223 SND1Q7KZF4 910 aaKnown RBP eCLIP10.29□□□□□ -0.76
SMC6-207ENST00000448223 CROCCP2Q86T23 111 aa10.29□□□□□ -0.76
SMC6-207ENST00000448223 IFT20Q8IY31 132 aa10.29□□□□□ -0.76
SMC6-207ENST00000448223 LMBR1Q8WVP7 490 aa10.29□□□□□ -0.76
SMC6-207ENST00000448223 Q9H521 79 aa10.29□□□□□ -0.76
SMC6-207ENST00000448223 AOX1Q06278 1338 aa10.29□□□□□ -0.76
SMC6-207ENST00000448223 TTC21AQ8NDW8 1320 aa10.29□□□□□ -0.76
SMC6-207ENST00000448223 MYO5BQ9ULV0 1848 aa10.29□□□□□ -0.76
SMC6-207ENST00000448223 PTPDC1A2A3K4 754 aa10.29□□□□□ -0.76
SMC6-207ENST00000448223 IQCA1Q86XH1 822 aa10.29□□□□□ -0.76
SMC6-207ENST00000448223 MRPS27Q92552 414 aaKnown RBP10.29□□□□□ -0.76
SMC6-207ENST00000448223 RPS6KB1P23443 525 aa10.28□□□□□ -0.76
SMC6-207ENST00000448223 COL9A3Q14050 684 aaPredicted RBP10.28□□□□□ -0.76
SMC6-207ENST00000448223 TOM1L2Q6ZVM7 507 aa10.28□□□□□ -0.76
SMC6-207ENST00000448223 YIPF3Q9GZM5 350 aa10.28□□□□□ -0.76
SMC6-207ENST00000448223 CNNM1Q9NRU3 951 aa10.28□□□□□ -0.76
SMC6-207ENST00000448223 ORC3Q9UBD5 711 aaPredicted RBP10.28□□□□□ -0.76
SMC6-207ENST00000448223 TTC41PQ6P2S7 1318 aa10.28□□□□□ -0.76
SMC6-207ENST00000448223 NPHP3Q7Z494 1330 aa10.28□□□□□ -0.76
SMC6-207ENST00000448223 CRB1P82279 1406 aa10.28□□□□□ -0.76
SMC6-207ENST00000448223 AMOTQ4VCS5 1084 aa10.28□□□□□ -0.76
SMC6-207ENST00000448223 CCDC25Q86WR0 208 aa10.28□□□□□ -0.76
SMC6-207ENST00000448223 EXOC4Q96A65 974 aa10.28□□□□□ -0.76
SMC6-207ENST00000448223 IKQ13123 557 aaPredicted RBP10.28□□□□□ -0.76
SMC6-207ENST00000448223 PSMD6Q15008 389 aa10.28□□□□□ -0.76
SMC6-207ENST00000448223 CALR3Q96L12 384 aaKnown RBP10.28□□□□□ -0.76
SMC6-207ENST00000448223 SESN3P58005 492 aa10.28□□□□□ -0.76
SMC6-207ENST00000448223 AKAP4Q5JQC9 854 aa10.28□□□□□ -0.76
SMC6-207ENST00000448223 SAMD1Q6SPF0 538 aaPredicted RBP10.28□□□□□ -0.76
SMC6-207ENST00000448223 TAOK1Q7L7X3 1001 aa10.28□□□□□ -0.76
SMC6-207ENST00000448223 ATG3Q9NT62 314 aa10.28□□□□□ -0.76
SMC6-207ENST00000448223 GJB4Q9NTQ9 266 aa10.28□□□□□ -0.76
SMC6-207ENST00000448223 AKAP2Q9Y2D5 859 aa10.28□□□□□ -0.76
SMC6-207ENST00000448223 RPAP1Q9BWH6 1393 aaPredicted RBP10.28□□□□□ -0.76
SMC6-207ENST00000448223 A2ML1A8K2U0 1454 aa10.27□□□□□ -0.76
SMC6-207ENST00000448223 IDEP14735 1019 aa10.27□□□□□ -0.76
SMC6-207ENST00000448223 ZFXP17010 805 aaPredicted RBP10.27□□□□□ -0.76
SMC6-207ENST00000448223 ATICP31939 592 aa10.27□□□□□ -0.76
SMC6-207ENST00000448223 TRIM47Q96LD4 638 aa10.27□□□□□ -0.76
SMC6-207ENST00000448223 DNAI2Q9GZS0 605 aa10.27□□□□□ -0.76
SMC6-207ENST00000448223 KLF18A0A0U1RQI7 1052 aa10.27□□□□□ -0.77
SMC6-207ENST00000448223 GOLGA8KD6RF30 607 aa10.27□□□□□ -0.77
SMC6-207ENST00000448223 PHEXP78562 749 aa10.27□□□□□ -0.77
SMC6-207ENST00000448223 RAD51AP2Q09MP3 1159 aa10.27□□□□□ -0.77
SMC6-207ENST00000448223 CALCOCO2Q13137 446 aa10.27□□□□□ -0.77
SMC6-207ENST00000448223 TAF11Q15544 211 aa10.27□□□□□ -0.77
SMC6-207ENST00000448223 NBPF5PQ86XG9 351 aaPredicted RBP10.27□□□□□ -0.77
SMC6-207ENST00000448223 ZNF496Q96IT1 587 aaPredicted RBP10.27□□□□□ -0.77
SMC6-207ENST00000448223 GPHNQ9NQX3 736 aaPredicted RBP10.27□□□□□ -0.77
SMC6-207ENST00000448223 U3KPZ7 1027 aaPredicted RBP10.27□□□□□ -0.77
SMC6-207ENST00000448223 ANKRD26Q9UPS8 1709 aa10.27□□□□□ -0.77
SMC6-207ENST00000448223 RNF40O75150 1001 aa10.27□□□□□ -0.77
SMC6-207ENST00000448223 SASH1O94885 1247 aa10.27□□□□□ -0.77
SMC6-207ENST00000448223 TRPC3Q13507 836 aa10.27□□□□□ -0.77
SMC6-207ENST00000448223 PDCD2Q16342 344 aaPredicted RBP10.27□□□□□ -0.77
SMC6-207ENST00000448223 CFAP157Q5JU67 520 aa10.27□□□□□ -0.77
SMC6-207ENST00000448223 TADA2BQ86TJ2 420 aa10.27□□□□□ -0.77
SMC6-207ENST00000448223 CNGA4Q8IV77 575 aa10.27□□□□□ -0.77
SMC6-207ENST00000448223 CCDC26Q8TAB7 109 aa10.27□□□□□ -0.77
SMC6-207ENST00000448223 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.27□□□□□ -0.77
SMC6-207ENST00000448223 EFCAB8A8MWE9 144 aa10.27□□□□□ -0.77
SMC6-207ENST00000448223 ATF3P18847 181 aa10.27□□□□□ -0.77
SMC6-207ENST00000448223 GUCY2CP25092 1073 aa10.27□□□□□ -0.77
SMC6-207ENST00000448223 SF3A3Q12874 501 aaKnown RBP eCLIP10.27□□□□□ -0.772e-10■■■■□ 21.6
SMC6-207ENST00000448223 SLC4A8Q2Y0W8 1093 aa10.27□□□□□ -0.77
SMC6-207ENST00000448223 MCMDC2Q4G0Z9 681 aa10.27□□□□□ -0.77
SMC6-207ENST00000448223 FAM212AQ96EL1 285 aa10.27□□□□□ -0.77
SMC6-207ENST00000448223 PYM1Q9BRP8 204 aaKnown RBP10.27□□□□□ -0.77
SMC6-207ENST00000448223 ZSWIM6Q9HCJ5 1215 aa10.27□□□□□ -0.77
SMC6-207ENST00000448223 IQSEC3Q9UPP2 1182 aaPredicted RBP10.27□□□□□ -0.77
SMC6-207ENST00000448223 ZNF75DP51815 510 aa10.26□□□□□ -0.77
SMC6-207ENST00000448223 MAP3K7CLP57077 242 aa10.26□□□□□ -0.77
SMC6-207ENST00000448223 KRI1Q8N9T8 703 aaKnown RBP10.26□□□□□ -0.77
SMC6-207ENST00000448223 KCNH5Q8NCM2 988 aa10.26□□□□□ -0.77
SMC6-207ENST00000448223 HELBQ8NG08 1087 aaPredicted RBP10.26□□□□□ -0.77
SMC6-207ENST00000448223 UIMC1Q96RL1 719 aa10.26□□□□□ -0.77
SMC6-207ENST00000448223 TTF2Q9UNY4 1162 aaKnown RBP10.26□□□□□ -0.77
SMC6-207ENST00000448223 HNRNPCP07910 306 aaKnown RBP eCLIP10.26□□□□□ -0.77
SMC6-207ENST00000448223 ATP2B2Q01814 1243 aa10.26□□□□□ -0.77
SMC6-207ENST00000448223 PPP1R21Q6ZMI0 780 aa10.26□□□□□ -0.77
SMC6-207ENST00000448223 SMC1BQ8NDV3 1235 aa10.26□□□□□ -0.77
SMC6-207ENST00000448223 IP6K1Q92551 441 aa10.26□□□□□ -0.77
SMC6-207ENST00000448223 PALMDQ9NP74 551 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms