RNA–Protein interactions for RNA: ENST00000447839.6

ERCC6-203, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 2 BASIC

Gene ERCC6, Length 3,411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-203ENST00000447839 TSPY3P0CV98 308 aa13.57□□□□□ -0.24
ERCC6-203ENST00000447839 TSPY8P0CW00 308 aa13.57□□□□□ -0.24
ERCC6-203ENST00000447839 CCAR1Q8IX12 1150 aaKnown RBP13.57□□□□□ -0.24
ERCC6-203ENST00000447839 CTCFLQ8NI51 663 aaPredicted RBP13.57□□□□□ -0.24
ERCC6-203ENST00000447839 PDGFDQ9GZP0 370 aaPredicted RBP13.57□□□□□ -0.24
ERCC6-203ENST00000447839 STK36Q9NRP7 1315 aa13.57□□□□□ -0.24
ERCC6-203ENST00000447839 CALM1P0DP23 149 aa13.57□□□□□ -0.24
ERCC6-203ENST00000447839 CALM2P0DP24 149 aa13.57□□□□□ -0.24
ERCC6-203ENST00000447839 CALM3P0DP25 149 aa13.57□□□□□ -0.24
ERCC6-203ENST00000447839 BAG6P46379 1132 aa13.57□□□□□ -0.24
ERCC6-203ENST00000447839 RCAN1P53805 252 aa13.57□□□□□ -0.24
ERCC6-203ENST00000447839 CKAP2LQ8IYA6 745 aa13.57□□□□□ -0.24
ERCC6-203ENST00000447839 PPP2R5BQ15173 497 aa13.56□□□□□ -0.24
ERCC6-203ENST00000447839 CCDC73Q6ZRK6 1079 aa13.56□□□□□ -0.24
ERCC6-203ENST00000447839 PIBF1Q8WXW3 757 aa13.56□□□□□ -0.24
ERCC6-203ENST00000447839 KAT14Q9H8E8 782 aa13.56□□□□□ -0.24
ERCC6-203ENST00000447839 DAGLAQ9Y4D2 1042 aa13.56□□□□□ -0.24
ERCC6-203ENST00000447839 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.56□□□□□ -0.24
ERCC6-203ENST00000447839 PLEKHA8P1O95397 391 aa13.56□□□□□ -0.24
ERCC6-203ENST00000447839 MAP3K11Q16584 847 aa13.56□□□□□ -0.24
ERCC6-203ENST00000447839 STYK1Q6J9G0 422 aa13.56□□□□□ -0.24
ERCC6-203ENST00000447839 CERS5Q8N5B7 392 aa13.56□□□□□ -0.24
ERCC6-203ENST00000447839 DDX19AQ9NUU7 478 aaKnown RBP13.56□□□□□ -0.24
ERCC6-203ENST00000447839 RTEL1Q9NZ71 1219 aa13.56□□□□□ -0.24
ERCC6-203ENST00000447839 TNS1Q9HBL0 1735 aaKnown RBP13.56□□□□□ -0.24
ERCC6-203ENST00000447839 FLT1P17948 1338 aa13.55□□□□□ -0.24
ERCC6-203ENST00000447839 TROAPQ12815 778 aa13.55□□□□□ -0.24
ERCC6-203ENST00000447839 NBPF11Q86T75 865 aa13.55□□□□□ -0.24
ERCC6-203ENST00000447839 CNKSR1Q969H4 720 aa13.55□□□□□ -0.24
ERCC6-203ENST00000447839 FAM163AQ96GL9 167 aaPredicted RBP13.55□□□□□ -0.24
ERCC6-203ENST00000447839 ZNF287Q9HBT7 754 aa13.55□□□□□ -0.24
ERCC6-203ENST00000447839 RBM28Q9NW13 759 aaKnown RBP13.55□□□□□ -0.24
ERCC6-203ENST00000447839 STX8Q9UNK0 236 aa13.55□□□□□ -0.24
ERCC6-203ENST00000447839 V9GY48 417 aaPredicted RBP13.55□□□□□ -0.24
ERCC6-203ENST00000447839 USP17L3A6NCW0 530 aa13.55□□□□□ -0.24
ERCC6-203ENST00000447839 USP17L4A6NCW7 530 aa13.55□□□□□ -0.24
ERCC6-203ENST00000447839 RHBDL3P58872 404 aa13.55□□□□□ -0.24
ERCC6-203ENST00000447839 USP17L1Q7RTZ2 530 aa13.55□□□□□ -0.24
ERCC6-203ENST00000447839 TRIM44Q96DX7 344 aaPredicted RBP13.55□□□□□ -0.24
ERCC6-203ENST00000447839 KCNQ5Q9NR82 932 aa13.55□□□□□ -0.24
ERCC6-203ENST00000447839 SPTLC2O15270 562 aa13.55□□□□□ -0.24
ERCC6-203ENST00000447839 DDAH1O94760 285 aa13.55□□□□□ -0.24
ERCC6-203ENST00000447839 ANO1Q5XXA6 986 aa13.55□□□□□ -0.24
ERCC6-203ENST00000447839 LINC00301Q8NCQ3 95 aa13.55□□□□□ -0.24
ERCC6-203ENST00000447839 PCDHA7Q9UN72 937 aa13.55□□□□□ -0.24
ERCC6-203ENST00000447839 NID2Q14112 1375 aa13.55□□□□□ -0.24
ERCC6-203ENST00000447839 BTBD18B2RXH4 712 aa13.54□□□□□ -0.24
ERCC6-203ENST00000447839 XBP1P17861 261 aa13.54□□□□□ -0.24
ERCC6-203ENST00000447839 DIS3L2Q8IYB7 885 aaKnown RBP13.54□□□□□ -0.24
ERCC6-203ENST00000447839 FSIP1Q8NA03 581 aa13.54□□□□□ -0.24
ERCC6-203ENST00000447839 KCNG4Q8TDN1 519 aa13.54□□□□□ -0.24
ERCC6-203ENST00000447839 GAKO14976 1311 aa13.54□□□□□ -0.24
ERCC6-203ENST00000447839 NRXN2Q9P2S2 1712 aa13.54□□□□□ -0.24
ERCC6-203ENST00000447839 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.54□□□□□ -0.24
ERCC6-203ENST00000447839 RNF26Q9BY78 433 aaPredicted RBP13.54□□□□□ -0.24
ERCC6-203ENST00000447839 POLR3EQ9NVU0 708 aa13.54□□□□□ -0.24
ERCC6-203ENST00000447839 MMP1P03956 469 aa13.54□□□□□ -0.24
ERCC6-203ENST00000447839 CCDC192P0DO97 292 aa13.54□□□□□ -0.24
ERCC6-203ENST00000447839 MARCKSP29966 332 aaPredicted RBP13.54□□□□□ -0.24
ERCC6-203ENST00000447839 RBM5P52756 815 aaKnown RBP eCLIP13.54□□□□□ -0.24
ERCC6-203ENST00000447839 PODNQ7Z5L7 613 aa13.54□□□□□ -0.24
ERCC6-203ENST00000447839 KIAA0825Q8IV33 1275 aa13.54□□□□□ -0.24
ERCC6-203ENST00000447839 RTN4Q9NQC3 1192 aaKnown RBP13.54□□□□□ -0.24
ERCC6-203ENST00000447839 USP40Q9NVE5 1235 aa13.54□□□□□ -0.24
ERCC6-203ENST00000447839 VPS54Q9P1Q0 977 aa13.54□□□□□ -0.24
ERCC6-203ENST00000447839 LRRC37AA6NMS7 1700 aa13.53□□□□□ -0.24
ERCC6-203ENST00000447839 YEATS4O95619 227 aa13.53□□□□□ -0.24
ERCC6-203ENST00000447839 CDK8P49336 464 aa13.53□□□□□ -0.24
ERCC6-203ENST00000447839 IL17RBQ9NRM6 502 aa13.53□□□□□ -0.24
ERCC6-203ENST00000447839 SUGT1Q9Y2Z0 365 aa13.53□□□□□ -0.24
ERCC6-203ENST00000447839 ATP2B1P20020 1258 aa13.53□□□□□ -0.24
ERCC6-203ENST00000447839 CCDC173Q0VFZ6 552 aa13.53□□□□□ -0.24
ERCC6-203ENST00000447839 PNMA1Q8ND90 353 aa13.53□□□□□ -0.24
ERCC6-203ENST00000447839 TEKT1Q969V4 418 aa13.53□□□□□ -0.24
ERCC6-203ENST00000447839 GOLPH3LQ9H4A5 285 aa13.53□□□□□ -0.24
ERCC6-203ENST00000447839 CLSTN2Q9H4D0 955 aa13.53□□□□□ -0.24
ERCC6-203ENST00000447839 COL11A2P13942 1736 aaPredicted RBP13.53□□□□□ -0.24
ERCC6-203ENST00000447839 C21orf2O43822 256 aa13.52□□□□□ -0.24
ERCC6-203ENST00000447839 KINO60870 393 aaKnown RBP13.52□□□□□ -0.24
ERCC6-203ENST00000447839 AOC3Q16853 763 aa13.52□□□□□ -0.24
ERCC6-203ENST00000447839 RCSD1Q6JBY9 416 aa13.52□□□□□ -0.24
ERCC6-203ENST00000447839 A0A1B0GVL5 298 aa13.52□□□□□ -0.25
ERCC6-203ENST00000447839 ECE2O60344 883 aa13.52□□□□□ -0.25
ERCC6-203ENST00000447839 RASA1P20936 1047 aa13.52□□□□□ -0.25
ERCC6-203ENST00000447839 U2AF2P26368 475 aaKnown RBP eCLIP13.52□□□□□ -0.25
ERCC6-203ENST00000447839 KIF5BP33176 963 aa13.52□□□□□ -0.25
ERCC6-203ENST00000447839 PLCB2Q00722 1185 aa13.52□□□□□ -0.25
ERCC6-203ENST00000447839 TMTC3Q6ZXV5 915 aa13.52□□□□□ -0.25
ERCC6-203ENST00000447839 DGKHQ86XP1 1220 aa13.52□□□□□ -0.25
ERCC6-203ENST00000447839 NOSTRINQ8IVI9 506 aa13.52□□□□□ -0.25
ERCC6-203ENST00000447839 NR5A1Q13285 461 aa13.52□□□□□ -0.25
ERCC6-203ENST00000447839 ADALQ6DHV7 355 aa13.52□□□□□ -0.25
ERCC6-203ENST00000447839 SRBD1Q8N5C6 995 aaKnown RBP13.52□□□□□ -0.25
ERCC6-203ENST00000447839 MRPS27Q92552 414 aaKnown RBP13.52□□□□□ -0.25
ERCC6-203ENST00000447839 PRPF3O43395 683 aaKnown RBP13.51□□□□□ -0.25
ERCC6-203ENST00000447839 SASS6Q6UVJ0 657 aa13.51□□□□□ -0.25
ERCC6-203ENST00000447839 RGS22Q8NE09 1264 aa13.51□□□□□ -0.25
ERCC6-203ENST00000447839 LTBP1Q14766 1721 aa13.51□□□□□ -0.25
ERCC6-203ENST00000447839 KIAA1551Q9HCM1 1747 aa13.51□□□□□ -0.25
ERCC6-203ENST00000447839 CCDC178Q5BJE1 867 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms